iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111441

Ensembl Protein ID

Solyc12g088340.1.1

UniProt Accession

K4DGQ5; K4DGQ5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g088340.1	Solyc12g088340.1.1	Solyc12g088340.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-27	94.0	188	225
UBD/Beta-Prp	3.70e-40	138.7	29	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gH d+v ++++  s+ + l++G+ Dg i+ WD+r+  +
   Q: 188  GHRDGVMSVEWsaSSeWVLITGGCDGAIRFWDIRRAGC 225
           8************556****************987765 PP

UBD/Beta-Prp

   S: 33   tikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls............tgkcvhtlk.....ghedsvlslsfsp. 104
           +i++ ++++      +s h + v++++ + ++  +l+++++D+ + v+d++            + k +  +      gh++ + + +++p 
   Q: 29   SIQLSNYKD-----IISPHRGSVNSLQVDLTEGrYLLSSASDASVAVYDVQratdydesgliaKHKHILLVDkqheqGHKYAISTANWYPi 114
           566666666.....56889999999999877666999999999999998888888888888875555555546677799999999999997 PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.k 193
           ++  +++Gs d +++vwd++t q++ +++ + +  ++ ++   ++  l+++G+ D +vrl d+++g   +tl+g h d v s++++ ++  
   Q: 115  DTGLFITGSYDHYVNVWDTNTTQVVVNFKMPGKVYNTAMSPVATShMLIAAGTEDVQVRLCDISSGAFAHTLSG-HRDGVMSVEWSASSeW 204
           77999999999999999999999999888888888888888888888999999999999999999999999998.9999999999888855 PP
   S: 194  elvsgsldgtvklwdlqtgecvrtlngh 221
            l++g++dg +++wd+++  c r l   
   Q: 205  VLITGGCDGAIRFWDIRRAGCFRVLDQS 232
           7889999999999999988888776654 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MWKEIGDREF GKLRPNLFSN RIKSARIASI QLSNYKDIIS PHRGSVNSLQ VDLTEGRYLL 60
SSASDASVAV YDVQRATDYD ESGLIAKHKH ILLVDKQHEQ GHKYAISTAN WYPIDTGLFI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGAAGG AGATCGGAGA CAGAGAATTT GGCAAGCTTC GCCCTAATTT ATTCAGCAAT 60
CGTATTAAGT CGGCTAGAAT CGCTTCTATT CAACTCTCCA ACTACAAAGA TATCATTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sly:101255378

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001170	Aegilops tauschii	68.84	1.00e-55	210.00
IUUC-Aml-002201	Ailuropoda melanoleuca	34.18	9.00e-68	249.00
IUUC-Atr-002784	Amborella trichopoda	63.08	6.00e-169	586.00
IUUC-Apl-003202	Anas platyrhynchos	35.37	4.00e-71	261.00
IUUC-Aca-004708	Anolis carolinensis	31.28	2.00e-53	201.00
IUUC-Aly-006144	Arabidopsis lyrata	68.42	0.00e+00	632.00
IUUC-Ath-006673	Arabidopsis thaliana	69.15	4.00e-178	616.00
IUUC-Acl-008195	Aspergillus clavatus	30.53	3.00e-28	119.00
IUUC-Afl-008406	Aspergillus flavus	26.81	6.00e-24	104.00
IUUC-Afu-008759	Aspergillus fumigatus	27.64	2.00e-26	113.00
IUUC-Ani-009380	Aspergillus nidulans	29.08	5.00e-28	117.00
IUUC-Ang-009820	Aspergillus niger	28.43	3.00e-23	101.00
IUUC-Aor-010092	Aspergillus oryzae	29.41	4.00e-30	124.00
IUUC-Ate-010491	Aspergillus terreus	29.33	6.00e-30	124.00
IUUC-Bta-012825	Bos taurus	30.02	4.00e-55	207.00
IUUC-Bci-013856	Botrytis cinerea	30.83	4.00e-32	131.00
IUUC-Bdi-014899	Brachypodium distachyon	63.57	6.00e-163	566.00
IUUC-Bol-015337	Brassica oleracea	65.71	1.00e-175	608.00
IUUC-Bra-018089	Brassica rapa	66.15	1.00e-177	615.00
IUUC-Cja-018725	Callithrix jacchus	29.18	4.00e-52	197.00
IUUC-Cfa-021162	Canis familiaris	30.59	2.00e-54	206.00
IUUC-Cpo-022190	Cavia porcellus	31.57	1.00e-58	219.00
IUUC-Cre-022960	Chlamydomonas reinhardtii	38.77	1.00e-47	183.00
IUUC-Csa-023610	Chlorocebus sabaeus	28.94	2.00e-52	198.00
IUUC-Cho-024689	Choloepus hoffmanni	31.42	3.00e-51	194.00
IUUC-Cin-025324	Ciona intestinalis	30.43	5.00e-51	194.00
IUUC-Csv-026059	Ciona savignyi	32.61	2.00e-32	132.00
IUUC-Cgl-026384	Colletotrichum gloeosporioides	30.00	2.00e-18	86.30
IUUC-Cme-027182	Cyanidioschyzon merolae	33.11	9.00e-17	81.30
IUUC-Dre-028696	Danio rerio	34.24	4.00e-66	244.00
IUUC-Dno-029102	Dasypus novemcinctus	29.95	6.00e-53	200.00
IUUC-Dor-030361	Dipodomys ordii	29.91	5.00e-27	114.00
IUUC-Dse-031167	Dothistroma septosporum	30.27	3.00e-36	145.00
IUUC-Ete-032856	Echinops telfairi	30.35	2.00e-27	115.00
IUUC-Eca-033611	Equus caballus	32.98	1.00e-51	195.00
IUUC-Eeu-034583	Erinaceus europaeus	46.81	5.00e-21	94.40
IUUC-Fca-036481	Felis catus	30.59	5.00e-55	207.00
IUUC-Fal-037327	Ficedula albicollis	36.60	5.00e-63	233.00
IUUC-Fox-037684	Fusarium oxysporum	28.75	1.00e-32	133.00
IUUC-Fso-038306	Fusarium solani	29.21	9.00e-35	140.00
IUUC-Gmo-039043	Gadus morhua	32.81	2.00e-65	242.00
IUUC-Ggr-039783	Gaeumannomyces graminis	30.27	7.00e-30	124.00
IUUC-Gga-041085	Gallus gallus	33.66	5.00e-64	237.00
IUUC-Gac-042328	Gasterosteus aculeatus	33.74	6.00e-58	217.00
IUUC-Gma-042916	Glycine max	69.58	3.00e-178	617.00
IUUC-Ggo-045627	Gorilla gorilla	34.16	2.00e-36	145.00
IUUC-Hsa-046028	Homo sapiens	28.94	2.00e-52	198.00
IUUC-Hvu-047678	Hordeum vulgare	61.08	6.00e-106	376.00
IUUC-Itr-048648	Ictidomys tridecemlineatus	30.97	2.00e-57	215.00
IUUC-Kpa-049386	Komagataella pastoris	28.00	6.00e-34	137.00
IUUC-Lch-050590	Latimeria chalumnae	28.47	6.00e-44	170.00
IUUC-Lpe-051725	Leersia perrieri	46.85	5.00e-100	357.00
IUUC-Loc-051788	Lepisosteus oculatus	34.64	2.00e-67	248.00
IUUC-Lma-053082	Leptosphaeria maculans	30.14	5.00e-45	174.00
IUUC-Laf-053809	Loxodonta africana	30.96	1.00e-55	209.00
IUUC-Mcc-054998	Macaca mulatta	33.09	2.00e-44	172.00
IUUC-Meu-055929	Macropus eugenii	35.83	7.00e-61	226.00
IUUC-Mor-057003	Magnaporthe oryzae	28.23	6.00e-36	144.00
IUUC-Mtr-057921	Medicago truncatula	69.54	0.00e+00	625.00
IUUC-Mga-059449	Meleagris gallopavo	39.52	9.00e-34	136.00
IUUC-Mmr-061609	Microcebus murinus	29.41	3.00e-50	191.00
IUUC-Mdo-062564	Monodelphis domestica	34.22	1.00e-69	255.00
IUUC-Mmu-063904	Mus musculus	30.30	4.00e-54	204.00
IUUC-Mac-064716	Musa acuminata	62.96	3.00e-169	587.00
IUUC-Mpu-066617	Mustela putorius furo	31.37	3.00e-55	208.00
IUUC-Mlu-067054	Myotis lucifugus	40.00	5.00e-45	174.00
IUUC-Nfi-068467	Neosartorya fischeri	27.38	2.00e-21	96.30
IUUC-Nle-069731	Nomascus leucogenys	28.94	2.00e-52	198.00
IUUC-Ont-072558	Oreochromis niloticus	33.03	4.00e-58	218.00
IUUC-Oan-072864	Ornithorhynchus anatinus	52.63	3.00e-15	71.60
IUUC-Ocu-074415	Oryctolagus cuniculus	30.35	2.00e-55	209.00
IUUC-Oba-075759	Oryza barthii	64.15	2.00e-156	545.00
IUUC-Obr-076387	Oryza brachyantha	64.73	1.00e-159	555.00
IUUC-Ogl-077924	Oryza glaberrima	57.95	3.00e-49	187.00
IUUC-Ogu-078186	Oryza glumaepatula	58.77	2.00e-144	504.00
IUUC-Oin-079389	Oryza indica	46.04	1.00e-59	222.00
IUUC-Olo-080916	Oryza longistaminata	72.31	9.00e-27	112.00
IUUC-Ome-081471	Oryza meridionalis	64.52	2.00e-120	425.00
IUUC-Oni-082449	Oryza nivara	64.90	3.00e-146	511.00
IUUC-Opu-083210	Oryza punctata	64.69	5.00e-159	553.00
IUUC-Oru-085159	Oryza rufipogon	64.22	5.00e-156	543.00
IUUC-Osa-085926	Oryza sativa	71.61	1.00e-66	244.00
IUUC-Ola-087084	Oryzias latipes	32.51	3.00e-64	238.00
IUUC-Olu-087853	Ostreococcus lucimarinus	36.88	3.00e-63	234.00
IUUC-Oga-089008	Otolemur garnettii	30.40	9.00e-55	206.00
IUUC-Oar-089259	Ovis aries	30.35	5.00e-55	207.00
IUUC-Ptr-091112	Pan troglodytes	28.99	7.00e-51	193.00
IUUC-Psi-093050	Pelodiscus sinensis	34.42	7.00e-66	243.00
IUUC-Pma-094317	Petromyzon marinus	31.39	7.00e-32	130.00
IUUC-Pno-094798	Phaeosphaeria nodorum	29.79	3.00e-46	178.00
IUUC-Ppa-095477	Physcomitrella patens	50.77	4.00e-138	483.00
IUUC-Pfo-096855	Poecilia formosa	32.95	3.00e-65	241.00
IUUC-Pab-098096	Pongo abelii	31.38	4.00e-58	218.00
IUUC-Pop-098800	Populus trichocarpa	70.46	0.00e+00	675.00
IUUC-Pca-100187	Procavia capensis	37.50	3.00e-37	148.00
IUUC-Ppe-101759	Prunus persica	72.91	0.00e+00	677.00
IUUC-Pva-102438	Pteropus vampyrus	40.40	9.00e-32	130.00
IUUC-Pte-104197	Pyrenophora teres	29.64	1.00e-45	176.00
IUUC-Pyt-104421	Pyrenophora triticirepentis	28.64	1.00e-39	156.00
IUUC-Rno-106087	Rattus norvegicus	29.95	1.00e-54	206.00
IUUC-Sha-106831	Sarcophilus harrisii	32.29	3.00e-65	241.00
IUUC-Sja-107681	Schizosaccharomyces japonicus	34.40	2.00e-31	129.00
IUUC-Spo-108294	Schizosaccharomyces pombe	37.31	5.00e-35	140.00
IUUC-Ssl-108613	Sclerotinia sclerotiorum	31.68	5.00e-33	134.00
IUUC-Smo-109008	Selaginella moellendorffii	46.92	3.00e-124	437.00
IUUC-Sit-110300	Setaria italica	65.80	8.00e-157	545.00
IUUC-Stu-111995	Solanum tuberosum	97.13	0.00e+00	857.00
IUUC-Sar-113196	Sorex araneus	43.44	3.00e-24	105.00
IUUC-Sbi-113790	Sorghum bicolor	64.69	2.00e-155	541.00
IUUC-Ssc-115609	Sus scrofa	30.82	6.00e-56	210.00
IUUC-Tgu-116927	Taeniopygia guttata	32.56	3.00e-56	211.00
IUUC-Tru-118164	Takifugu rubripes	32.85	3.00e-65	241.00
IUUC-Tsy-119151	Tarsius syrichta	28.01	2.00e-45	175.00
IUUC-Tni-120896	Tetraodon nigroviridis	33.09	1.00e-58	219.00
IUUC-Tca-121592	Theobroma cacao	72.09	0.00e+00	686.00
IUUC-Tre-122023	Trichoderma reesei	33.01	2.00e-26	113.00
IUUC-Tvi-122507	Trichoderma virens	29.64	6.00e-34	137.00
IUUC-Tae-125276	Triticum aestivum	62.97	5.00e-152	530.00
IUUC-Tur-126092	Triticum urartu	67.74	7.00e-50	190.00
IUUC-Tbe-127422	Tupaia belangeri	33.01	4.00e-27	114.00
IUUC-Ttr-129097	Tursiops truncatus	30.09	2.00e-54	205.00
IUUC-Vda-130014	Verticillium dahliae	29.62	5.00e-32	131.00
IUUC-Vpa-130782	Vicugna pacos	30.82	3.00e-55	207.00
IUUC-Vvi-131494	Vitis vinifera	73.36	0.00e+00	698.00
IUUC-Xtr-132165	Xenopus tropicalis	33.17	9.00e-65	239.00
IUUC-Xma-133205	Xiphophorus maculatus	33.26	5.00e-68	250.00
IUUC-Yli-134614	Yarrowia lipolytica	29.07	8.00e-43	167.00
IUUC-Zma-135861	Zea mays	65.56	1.00e-157	548.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence