iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121197

Ensembl Protein ID

EOY30701

UniProt Accession

A0A061GMH2; A0A061GMH2_THECC

Genbank Protein ID

EOY30701.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001887

Gene Name

TCM_037822

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_037822	EOY30701	EOY30701

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-08	34.9	116	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f+d   +++lp C+H+fh  C+ +w        ++ +CPlCr
   Q: 116  CAVCLSKFEDIeiLRLLPkCKHAFHIGCIDRW------LERHSSCPLCR 158
           ********7723355666**************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNRLRVICLV LFFLLFNVDA QSPSSESDAT SGDAVSNFRP SLAVVIGVLC VMFSLTLFLL 60
VYAKFCHRGA TVHGDRHPGI LHRTRSQFSG IDKKVIESLP FFKFSSLKGS KQGLECAVCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGGAACAC AAGGAAACTG ACAAACAGGA AGGATACCCT TTTGGGGGAG TGACATGTTA 60
GTTAGGACCA TGCATAACAA ATCCATAAAA AACTAACCCC ATATAGAATA TTAGAAGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002959	Amborella trichopoda	41.79	2.00e-92	332.00
IUUC-Aly-005935	Arabidopsis lyrata	47.56	7.00e-93	333.00
IUUC-Ath-007561	Arabidopsis thaliana	48.66	2.00e-89	321.00
IUUC-Bdi-014982	Brachypodium distachyon	48.85	7.00e-35	140.00
IUUC-Bol-015814	Brassica oleracea	49.64	2.00e-94	338.00
IUUC-Bra-017519	Brassica rapa	47.50	2.00e-86	311.00
IUUC-Gma-042792	Glycine max	60.58	5.00e-129	453.00
IUUC-Hvu-047489	Hordeum vulgare	31.84	1.00e-42	166.00
IUUC-Lpe-051018	Leersia perrieri	30.33	2.00e-42	165.00
IUUC-Mtr-057998	Medicago truncatula	49.27	1.00e-85	308.00
IUUC-Mac-064701	Musa acuminata	42.93	4.00e-73	267.00
IUUC-Oba-075667	Oryza barthii	40.65	8.00e-42	163.00
IUUC-Obr-076167	Oryza brachyantha	30.65	1.00e-32	132.00
IUUC-Ogl-077500	Oryza glaberrima	40.65	8.00e-42	163.00
IUUC-Ogu-078252	Oryza glumaepatula	39.17	2.00e-42	165.00
IUUC-Oin-079781	Oryza indica	48.51	2.00e-35	142.00
IUUC-Ome-081414	Oryza meridionalis	39.92	2.00e-39	155.00
IUUC-Oni-082687	Oryza nivara	40.65	8.00e-42	163.00
IUUC-Opu-084088	Oryza punctata	34.90	3.00e-54	204.00
IUUC-Oru-084787	Oryza rufipogon	40.24	1.00e-42	166.00
IUUC-Osa-085704	Oryza sativa	40.65	8.00e-42	163.00
IUUC-Ppa-095281	Physcomitrella patens	53.28	1.00e-32	134.00
IUUC-Pop-099837	Populus trichocarpa	63.53	6.00e-133	466.00
IUUC-Ppe-101238	Prunus persica	65.09	7.00e-117	412.00
IUUC-Smo-108817	Selaginella moellendorffii	32.68	7.00e-22	97.10
IUUC-Sit-110634	Setaria italica	33.82	3.00e-55	208.00
IUUC-Sly-111674	Solanum lycopersicum	49.87	2.00e-92	331.00
IUUC-Stu-111967	Solanum tuberosum	52.45	8.00e-102	362.00
IUUC-Sbi-114371	Sorghum bicolor	33.33	7.00e-43	167.00
IUUC-Tae-123520	Triticum aestivum	47.83	2.00e-32	132.00
IUUC-Vvi-131412	Vitis vinifera	64.41	4.00e-137	480.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence