iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129865

Ensembl Protein ID

EGY19832

UniProt Accession

G2WW62; G2WW62_VERDV

Genbank Protein ID

EGY19832.1

Protein Name

Poly(A)+ RNA export protein

Genbank Nucleotide ID

DS572697

Gene Name

VDAG_01848

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_01848	EGY19832	EGY19832

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-24	83.5	119	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtg 33
           H  +v++++f   s+  ++vsGs+D+t+k WD+r++
   Q: 119  HDQPVRSVRFfesSGnQMVVSGSWDKTVKYWDMRQQ 154
           999******99*855799**************9987 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MSGLFGSASS SSASNTVGDL KSDVALSNPP EDTVSDLAFS PATNQTNDFL AISSWDKKVR 60
IYEVTGNGQS EGRHAYDHEG PVFNVDFSKD GTKVISGGAD KVVKCCDLGS RQEVKVGEHD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGGAC TTTTCGGCAG CGCGTCGTCT TCGTCGGCCA GCAACACCGT CGGCGACCTT 60
AAGTCGGATG TCGCTTTGAG CAACCCGCCC GAAGATACCG TCTCCGACCT TGCCTTTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005643--C:nuclear pore
GO:0016973--P:poly(A)+ mRNA export from nucleus

KEGG

vda:VDAG_01848

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	45.79	3.00e-76	276.00
IUUC-Aml-002179	Ailuropoda melanoleuca	41.84	2.00e-74	271.00
IUUC-Atr-002609	Amborella trichopoda	45.18	2.00e-80	290.00
IUUC-Apl-003637	Anas platyrhynchos	42.73	1.00e-76	278.00
IUUC-Aca-005042	Anolis carolinensis	41.54	1.00e-74	271.00
IUUC-Aly-006015	Arabidopsis lyrata	45.59	4.00e-82	296.00
IUUC-Ath-007659	Arabidopsis thaliana	45.59	4.00e-82	296.00
IUUC-Ago-008004	Ashbya gossypii	47.70	2.00e-97	347.00
IUUC-Acl-008030	Aspergillus clavatus	65.90	4.00e-140	488.00
IUUC-Afl-008636	Aspergillus flavus	65.90	1.00e-141	493.00
IUUC-Afu-009121	Aspergillus fumigatus	66.47	3.00e-140	489.00
IUUC-Ani-009238	Aspergillus nidulans	63.66	4.00e-140	488.00
IUUC-Ang-009801	Aspergillus niger	64.45	8.00e-143	497.00
IUUC-Aor-009974	Aspergillus oryzae	65.90	1.00e-141	493.00
IUUC-Ate-010406	Aspergillus terreus	66.57	5.00e-140	488.00
IUUC-Ame-011368	Astyanax mexicanus	43.62	8.00e-78	281.00
IUUC-Bgr-012233	Blumeria graminis	63.09	1.00e-139	487.00
IUUC-Bta-012856	Bos taurus	41.84	2.00e-74	271.00
IUUC-Bci-013964	Botrytis cinerea	62.64	2.00e-139	486.00
IUUC-Bdi-014049	Brachypodium distachyon	44.81	9.00e-83	298.00
IUUC-Bol-016601	Brassica oleracea	45.59	1.00e-80	291.00
IUUC-Bra-017292	Brassica rapa	45.90	2.00e-81	293.00
IUUC-Cel-018563	Caenorhabditis elegans	39.07	3.00e-68	249.00
IUUC-Cja-019700	Callithrix jacchus	41.54	2.00e-74	270.00
IUUC-Cfa-020337	Canis familiaris	41.54	2.00e-74	270.00
IUUC-Cpo-021858	Cavia porcellus	42.14	3.00e-75	273.00
IUUC-Cre-022748	Chlamydomonas reinhardtii	43.03	3.00e-76	276.00
IUUC-Csa-023322	Chlorocebus sabaeus	41.54	1.00e-74	271.00
IUUC-Cin-025393	Ciona intestinalis	40.60	5.00e-76	276.00
IUUC-Csv-026093	Ciona savignyi	40.00	9.00e-75	271.00
IUUC-Cgl-026503	Colletotrichum gloeosporioides	69.83	4.00e-144	501.00
IUUC-Cne-026774	Cryptococcus neoformans	43.52	8.00e-81	291.00
IUUC-Cme-027243	Cyanidioschyzon merolae	36.29	3.00e-65	240.00
IUUC-Dre-028159	Danio rerio	43.32	2.00e-78	283.00
IUUC-Dno-028852	Dasypus novemcinctus	41.54	2.00e-74	270.00
IUUC-Dse-031161	Dothistroma septosporum	59.67	2.00e-125	439.00
IUUC-Dme-032009	Drosophila melanogaster	46.27	4.00e-82	296.00
IUUC-Eca-033306	Equus caballus	41.25	1.00e-73	268.00
IUUC-Fca-035579	Felis catus	41.54	2.00e-74	270.00
IUUC-Fal-037582	Ficedula albicollis	42.43	5.00e-77	279.00
IUUC-Fox-037772	Fusarium oxysporum	80.52	5.00e-173	598.00
IUUC-Fso-038368	Fusarium solani	79.05	3.00e-171	592.00
IUUC-Gmo-038500	Gadus morhua	43.92	3.00e-78	283.00
IUUC-Ggr-040019	Gaeumannomyces graminis	72.07	1.00e-163	566.00
IUUC-Gga-040684	Gallus gallus	42.43	1.00e-76	278.00
IUUC-Gac-042592	Gasterosteus aculeatus	43.62	4.00e-78	283.00
IUUC-Gma-043437	Glycine max	46.85	4.00e-83	299.00
IUUC-Ggo-044965	Gorilla gorilla	41.84	4.00e-75	273.00
IUUC-Hsa-046779	Homo sapiens	42.77	4.00e-72	263.00
IUUC-Hvu-047380	Hordeum vulgare	48.20	2.00e-79	287.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	41.54	1.00e-74	271.00
IUUC-Kpa-049284	Komagataella pastoris	50.88	2.00e-103	367.00
IUUC-Lch-050559	Latimeria chalumnae	37.64	2.00e-66	244.00
IUUC-Lpe-051050	Leersia perrieri	45.73	9.00e-82	295.00
IUUC-Loc-052874	Lepisosteus oculatus	44.51	3.00e-80	290.00
IUUC-Lma-053085	Leptosphaeria maculans	57.26	2.00e-120	423.00
IUUC-Laf-053980	Loxodonta africana	41.54	3.00e-74	270.00
IUUC-Mcc-055408	Macaca mulatta	41.54	2.00e-74	270.00
IUUC-Meu-056551	Macropus eugenii	38.87	6.00e-65	239.00
IUUC-Mor-057248	Magnaporthe oryzae	74.58	5.00e-169	584.00
IUUC-Mpo-057390	Magnaporthe poae	72.63	5.00e-164	568.00
IUUC-Mtr-057675	Medicago truncatula	44.19	8.00e-81	291.00
IUUC-Mla-059155	Melampsora laricipopulina	45.70	2.00e-96	343.00
IUUC-Mga-060140	Meleagris gallopavo	41.86	1.00e-67	247.00
IUUC-Mvi-060311	Microbotryum violaceum	50.57	4.00e-102	362.00
IUUC-Mmr-061533	Microcebus murinus	41.84	6.00e-75	272.00
IUUC-Mdo-062593	Monodelphis domestica	42.14	2.00e-75	274.00
IUUC-Mmu-063362	Mus musculus	41.54	3.00e-74	270.00
IUUC-Mac-064968	Musa acuminata	43.07	5.00e-76	276.00
IUUC-Mpu-065722	Mustela putorius furo	41.84	3.00e-74	270.00
IUUC-Mlu-068124	Myotis lucifugus	41.25	4.00e-74	269.00
IUUC-Nfi-068595	Neosartorya fischeri	67.05	3.00e-141	492.00
IUUC-Ncr-068790	Neurospora crassa	69.83	2.00e-154	536.00
IUUC-Opr-070320	Ochotona princeps	37.98	1.00e-64	238.00
IUUC-Ont-071303	Oreochromis niloticus	42.73	2.00e-77	281.00
IUUC-Oan-073724	Ornithorhynchus anatinus	42.43	3.00e-76	276.00
IUUC-Ocu-074961	Oryctolagus cuniculus	43.09	3.00e-72	263.00
IUUC-Oba-075250	Oryza barthii	44.91	1.00e-81	294.00
IUUC-Obr-076805	Oryza brachyantha	44.61	4.00e-81	293.00
IUUC-Ogl-077767	Oryza glaberrima	45.73	9.00e-82	295.00
IUUC-Ogu-078760	Oryza glumaepatula	44.91	1.00e-81	294.00
IUUC-Oin-080219	Oryza indica	45.73	9.00e-82	295.00
IUUC-Olo-081007	Oryza longistaminata	45.73	9.00e-82	295.00
IUUC-Ome-081848	Oryza meridionalis	42.25	7.00e-78	282.00
IUUC-Oni-082844	Oryza nivara	45.73	9.00e-82	295.00
IUUC-Opu-083511	Oryza punctata	42.66	2.00e-76	277.00
IUUC-Oru-085012	Oryza rufipogon	45.73	9.00e-82	295.00
IUUC-Osa-085287	Oryza sativa	45.73	9.00e-82	295.00
IUUC-Ola-087292	Oryzias latipes	42.73	7.00e-78	282.00
IUUC-Olu-087689	Ostreococcus lucimarinus	47.43	6.00e-90	322.00
IUUC-Oga-088821	Otolemur garnettii	41.54	2.00e-74	270.00
IUUC-Oar-090253	Ovis aries	41.54	2.00e-74	270.00
IUUC-Ptr-091097	Pan troglodytes	41.84	7.00e-75	272.00
IUUC-Pan-091835	Papio anubis	41.54	2.00e-74	270.00
IUUC-Psi-093000	Pelodiscus sinensis	42.43	1.00e-76	278.00
IUUC-Pma-094273	Petromyzon marinus	42.09	2.00e-78	284.00
IUUC-Pno-094920	Phaeosphaeria nodorum	54.55	2.00e-111	394.00
IUUC-Ppa-095202	Physcomitrella patens	47.15	2.00e-62	230.00
IUUC-Pfo-096388	Poecilia formosa	43.62	3.00e-78	283.00
IUUC-Pab-097533	Pongo abelii	41.54	2.00e-74	270.00
IUUC-Pop-099348	Populus trichocarpa	45.98	4.00e-77	279.00
IUUC-Ppe-101915	Prunus persica	45.18	2.00e-82	297.00
IUUC-Pva-102233	Pteropus vampyrus	41.54	2.00e-74	271.00
IUUC-Pgr-103342	Puccinia graminis	49.29	2.00e-100	356.00
IUUC-Ptt-103836	Puccinia triticina	48.13	7.00e-100	355.00
IUUC-Pte-104387	Pyrenophora teres	60.40	6.00e-125	438.00
IUUC-Pyt-104737	Pyrenophora triticirepentis	58.63	1.00e-124	437.00
IUUC-Rno-105548	Rattus norvegicus	41.25	4.00e-74	269.00
IUUC-Sce-106379	Saccharomyces cerevisiae	48.14	1.00e-96	344.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	55.07	1.00e-109	387.00
IUUC-Spo-108293	Schizosaccharomyces pombe	55.56	2.00e-117	413.00
IUUC-Smo-109568	Selaginella moellendorffii	47.11	5.00e-86	308.00
IUUC-Sit-110436	Setaria italica	44.21	6.00e-82	295.00
IUUC-Sly-111037	Solanum lycopersicum	46.13	5.00e-85	305.00
IUUC-Sar-113159	Sorex araneus	27.73	9.00e-22	95.10
IUUC-Sbi-114361	Sorghum bicolor	44.35	3.00e-80	290.00
IUUC-Sre-114922	Sporisorium reilianum	38.14	2.00e-60	224.00
IUUC-Ssc-116305	Sus scrofa	41.54	2.00e-74	270.00
IUUC-Tgu-116751	Taeniopygia guttata	42.43	5.00e-77	279.00
IUUC-Tru-117798	Takifugu rubripes	43.03	5.00e-78	282.00
IUUC-Tsy-119523	Tarsius syrichta	43.84	3.00e-66	243.00
IUUC-Tni-120477	Tetraodon nigroviridis	43.36	8.00e-78	281.00
IUUC-Tca-121802	Theobroma cacao	45.37	2.00e-81	293.00
IUUC-Tre-121994	Trichoderma reesei	77.99	6.00e-163	564.00
IUUC-Tvi-122631	Trichoderma virens	78.13	5.00e-160	555.00
IUUC-Tae-125687	Triticum aestivum	45.09	6.00e-85	305.00
IUUC-Tur-126390	Triticum urartu	46.11	3.00e-83	300.00
IUUC-Tme-127152	Tuber melanosporum	62.71	2.00e-133	466.00
IUUC-Tbe-127319	Tupaia belangeri	34.68	7.00e-37	145.00
IUUC-Ttr-129207	Tursiops truncatus	40.65	1.00e-72	264.00
IUUC-Uma-129342	Ustilago maydis	37.84	2.00e-55	207.00
IUUC-Vpa-130076	Vicugna pacos	37.12	4.00e-55	206.00
IUUC-Vvi-131104	Vitis vinifera	45.37	2.00e-82	297.00
IUUC-Xtr-132917	Xenopus tropicalis	34.29	3.00e-48	184.00
IUUC-Xma-133615	Xiphophorus maculatus	43.62	3.00e-78	283.00
IUUC-Yli-134431	Yarrowia lipolytica	50.42	9.00e-104	368.00
IUUC-Zma-135142	Zea mays	44.11	7.00e-80	288.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence