iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	dbPTM	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	18213395

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	0.0037	15.8	14	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 100  aglldrlpeeilveilklldkeellraarvcrrwqelasqkalwktv 146
           + +l++lp+++l++il++ld ++l+++ ++c  +++la+++ +++++
   Q: 14   ERSLTNLPLNLLFRILSHLDMNDLQNIGKTCTLLRMLANENIVYRNA 60
           567899*******************************9988888765 PP

Organism

Saccharomyces cerevisiae

Protein Sequence
(Fasta)

MTLFSCSVQM PLEERSLTNL PLNLLFRILS HLDMNDLQNI GKTCTLLRML ANENIVYRNA 60
VIGSNGNMWW TKNVLVDVFD VLNFNRKAMK TLNSHNISLV ASLRNVQRKY KLGVIDPARK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACATTAT TTTCTTGTAG TGTACAGATG CCGCTGGAGG AAAGGTCCCT GACAAACTTA 60
CCATTAAACC TATTGTTCCG AATATTGTCT CACCTGGATA TGAATGATTT ACAAAACATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0496--Mitochondrion
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0031315--C:extrinsic component of mitochondrial outer membrane
GO:0019005--C:SCF ubiquitin ligase complex
GO:0007005--P:mitochondrion organization
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

sce:YDR219C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001134	Aegilops tauschii	40.54	1.60e-02	32.30
IUUC-Aly-006054	Arabidopsis lyrata	27.07	3.10e-02	32.00
IUUC-Ago-007996	Ashbya gossypii	27.78	1.00e-15	75.50
IUUC-Afu-008982	Aspergillus fumigatus	35.56	3.00e-03	34.30
IUUC-Ang-009660	Aspergillus niger	30.95	1.00e-01	30.40
IUUC-Ate-010540	Aspergillus terreus	37.78	9.00e-04	36.20
IUUC-Bci-013771	Botrytis cinerea	33.96	2.00e-03	35.00
IUUC-Bol-015639	Brassica oleracea	27.69	7.00e-03	32.70
IUUC-Bra-017574	Brassica rapa	27.69	1.00e-02	33.10
IUUC-Cel-018450	Caenorhabditis elegans	31.91	4.00e-03	33.10
IUUC-Csv-026017	Ciona savignyi	36.36	3.00e-03	34.30
IUUC-Cgl-026734	Colletotrichum gloeosporioides	41.46	1.30e-02	31.60
IUUC-Ggr-039962	Gaeumannomyces graminis	32.65	1.20e-02	33.10
IUUC-Gma-044390	Glycine max	36.84	2.20e-01	28.10
IUUC-Lpe-051370	Leersia perrieri	29.41	7.00e-04	37.70
IUUC-Lma-052967	Leptosphaeria maculans	37.78	1.00e-03	36.20
IUUC-Mor-057088	Magnaporthe oryzae	45.00	1.00e-03	35.00
IUUC-Mpo-057460	Magnaporthe poae	37.78	2.90e-02	31.60
IUUC-Mtr-058508	Medicago truncatula	33.90	1.30e-02	31.60
IUUC-Mla-058878	Melampsora laricipopulina	31.82	2.60e-02	30.40
IUUC-Mac-064591	Musa acuminata	34.38	2.00e-03	34.70
IUUC-Nfi-068574	Neosartorya fischeri	38.60	3.00e-05	41.60
IUUC-Oni-082534	Oryza nivara	23.21	3.00e-03	37.00
IUUC-Ssl-108402	Sclerotinia sclerotiorum	40.00	5.00e-04	37.40
IUUC-Tca-120980	Theobroma cacao	31.82	6.90e-02	30.00
IUUC-Tre-122078	Trichoderma reesei	35.56	3.30e-02	31.20
IUUC-Tae-123867	Triticum aestivum	34.62	5.00e-03	35.40
IUUC-Tur-126814	Triticum urartu	40.54	1.60e-02	32.30
IUUC-Vda-129669	Verticillium dahliae	46.34	5.00e-03	33.50
IUUC-Vvi-131501	Vitis vinifera	32.73	2.00e-04	37.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence