iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058220

Ensembl Protein ID

AES61402

UniProt Accession

G7I8Q2; G7I8Q2_MEDTR

Genbank Protein ID

AES61402.1

Protein Name

DNA-binding protein, putative

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g083390

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g083390	AES61402	AES61402

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-06	29.4	32	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle      ++    l CgH+fh+dC+    g+  + +++ +CP Cr
   Q: 32   CSICLEVVtdngDRSFAKLLCGHQFHLDCI----GSAFNIKGAMQCPNCR 77
           ****9988655544344577*********8....55579**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGLGNEEEDD NNNHNHNKVV DEGNKSLGSV SCSICLEVVT DNGDRSFAKL LCGHQFHLDC 60
IGSAFNIKGA MQCPNCRKIE KGQWLYANGS RSYPEFSMDD WTHDEDLYDL SYSEMSFGVH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTGACAA CAATCCAACA CATATTAAAA AATCATATTT GTAAGAAACA AGACAAAACA 60
CAATGTCATA GTTGGTCCTC TCTCTTCTTT CTTCTTCTTC CAAACATAAA CCAAACCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF17123--zf-RING_11

SMART

SM00184--RING

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g083390

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000830	Aegilops tauschii	36.79	1.00e-51	196.00
IUUC-Atr-002748	Amborella trichopoda	44.56	5.00e-57	214.00
IUUC-Aly-005896	Arabidopsis lyrata	55.10	2.00e-71	262.00
IUUC-Ath-007403	Arabidopsis thaliana	53.68	7.00e-65	240.00
IUUC-Bdi-014427	Brachypodium distachyon	40.20	2.00e-63	235.00
IUUC-Bol-015640	Brassica oleracea	56.12	2.00e-75	275.00
IUUC-Bra-016676	Brassica rapa	54.49	8.00e-69	253.00
IUUC-Gma-043964	Glycine max	87.38	0.00e+00	657.00
IUUC-Hvu-047201	Hordeum vulgare	40.05	2.00e-63	235.00
IUUC-Lpe-051713	Leersia perrieri	36.50	2.00e-41	162.00
IUUC-Mac-065621	Musa acuminata	39.95	4.00e-58	218.00
IUUC-Oba-074989	Oryza barthii	37.01	7.00e-51	194.00
IUUC-Obr-076234	Oryza brachyantha	39.90	2.00e-59	222.00
IUUC-Ogl-077797	Oryza glaberrima	39.39	1.00e-57	216.00
IUUC-Ogu-078642	Oryza glumaepatula	37.17	6.00e-54	204.00
IUUC-Oin-079296	Oryza indica	39.39	1.00e-57	216.00
IUUC-Olo-080222	Oryza longistaminata	35.89	9.00e-43	166.00
IUUC-Ome-081719	Oryza meridionalis	38.35	1.00e-54	206.00
IUUC-Oni-082543	Oryza nivara	37.24	4.00e-53	202.00
IUUC-Opu-083127	Oryza punctata	35.77	9.00e-50	190.00
IUUC-Oru-085073	Oryza rufipogon	38.83	2.00e-59	222.00
IUUC-Osa-086081	Oryza sativa	39.90	4.00e-62	231.00
IUUC-Pop-099904	Populus trichocarpa	72.39	9.00e-143	499.00
IUUC-Ppe-101525	Prunus persica	72.25	2.00e-146	511.00
IUUC-Sit-110374	Setaria italica	42.36	2.00e-62	232.00
IUUC-Sly-110853	Solanum lycopersicum	67.33	1.00e-145	509.00
IUUC-Stu-112616	Solanum tuberosum	67.16	1.00e-138	485.00
IUUC-Sbi-114202	Sorghum bicolor	42.74	8.00e-62	230.00
IUUC-Tca-121669	Theobroma cacao	73.59	3.00e-152	530.00
IUUC-Tae-125197	Triticum aestivum	38.50	2.00e-59	222.00
IUUC-Vvi-131398	Vitis vinifera	72.64	2.00e-155	541.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence