iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pma-094272

UUCD1 version

UUC-PeM-00013

Ensembl Protein ID

ENSPMAP00000009366.1

UniProt Accession

S4RVX6; S4RVX6_PETMA

Protein Name

Uncharacterized protein

Gene Name

DDB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000008479.1	ENSPMAT00000009406.1	ENSPMAP00000009366.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DDB1	52.78	0.00e+00	1071.00	IUUC-Ath-006658
E3 adaptor/Cullin RING/DCX/DDB1	37.81	0.00e+00	701.00	IUUC-Cel-018239
E3 adaptor/Cullin RING/DCX/DDB1	60.18	0.00e+00	1233.00	IUUC-Dme-031940

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

GHFTSAEDLN LLIAKNTRLE IYVVTPEGLR AVKEVGMYGK ISVMELFRPQ GEKKDLLFIL 60
TAKYNACILE YKQDGDNVDI ITRAHGNVQD RIGRPSETGI IGIVDPESRM IGLRLYDGLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCACTTCA CGTCCGCAGA GGACCTGAAC CTCCTCATTG CCAAGAACAC CCGGTTAGAG 60
ATCTACGTGG TGACGCCAGA GGGCCTGCGG GCCGTCAAGG AGGTCGGCAT GTACGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	49.72	0.00e+00	1024.00
IUUC-Aml-002096	Ailuropoda melanoleuca	86.84	0.00e+00	1836.00
IUUC-Atr-002742	Amborella trichopoda	52.97	0.00e+00	1078.00
IUUC-Apl-003624	Anas platyrhynchos	86.15	0.00e+00	1810.00
IUUC-Aca-005085	Anolis carolinensis	86.35	0.00e+00	1831.00
IUUC-Aly-005857	Arabidopsis lyrata	52.87	0.00e+00	1075.00
IUUC-Ath-006658	Arabidopsis thaliana	52.97	0.00e+00	1074.00
IUUC-Acl-008149	Aspergillus clavatus	27.45	9.00e-97	347.00
IUUC-Afl-008549	Aspergillus flavus	27.99	2.00e-102	366.00
IUUC-Afu-009076	Aspergillus fumigatus	27.47	4.00e-107	381.00
IUUC-Ani-009302	Aspergillus nidulans	26.74	1.00e-79	290.00
IUUC-Ang-009636	Aspergillus niger	27.86	3.00e-76	278.00
IUUC-Aor-010073	Aspergillus oryzae	28.02	3.00e-105	375.00
IUUC-Ate-010422	Aspergillus terreus	26.90	2.00e-96	345.00
IUUC-Ame-011643	Astyanax mexicanus	76.37	0.00e+00	1558.00
IUUC-Bgr-012164	Blumeria graminis	27.14	4.00e-90	325.00
IUUC-Bta-012494	Bos taurus	86.74	0.00e+00	1834.00
IUUC-Bci-013957	Botrytis cinerea	27.50	8.00e-87	313.00
IUUC-Bdi-014186	Brachypodium distachyon	52.39	0.00e+00	1064.00
IUUC-Bol-015922	Brassica oleracea	53.07	0.00e+00	1086.00
IUUC-Bra-017300	Brassica rapa	53.07	0.00e+00	1080.00
IUUC-Cel-018239	Caenorhabditis elegans	37.81	0.00e+00	710.00
IUUC-Cja-019165	Callithrix jacchus	86.74	0.00e+00	1835.00
IUUC-Cfa-020406	Canis familiaris	86.84	0.00e+00	1836.00
IUUC-Cpo-022154	Cavia porcellus	86.84	0.00e+00	1837.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	40.24	0.00e+00	707.00
IUUC-Csa-024061	Chlorocebus sabaeus	86.74	0.00e+00	1835.00
IUUC-Cho-024554	Choloepus hoffmanni	80.35	0.00e+00	711.00
IUUC-Cin-025466	Ciona intestinalis	61.07	0.00e+00	1324.00
IUUC-Csv-026370	Ciona savignyi	60.43	0.00e+00	1213.00
IUUC-Cgl-026595	Colletotrichum gloeosporioides	25.68	1.00e-88	320.00
IUUC-Cme-027342	Cyanidioschyzon merolae	28.41	5.00e-107	381.00
IUUC-Dre-027448	Danio rerio	88.33	0.00e+00	818.00
IUUC-Dno-029794	Dasypus novemcinctus	86.94	0.00e+00	1837.00
IUUC-Dor-030789	Dipodomys ordii	72.91	0.00e+00	858.00
IUUC-Dse-031491	Dothistroma septosporum	27.72	2.00e-101	362.00
IUUC-Dme-031940	Drosophila melanogaster	60.37	0.00e+00	1221.00
IUUC-Ete-032913	Echinops telfairi	80.00	0.00e+00	639.00
IUUC-Eca-033777	Equus caballus	86.94	0.00e+00	1837.00
IUUC-Eeu-034900	Erinaceus europaeus	83.10	0.00e+00	949.00
IUUC-Fca-035869	Felis catus	86.84	0.00e+00	1836.00
IUUC-Fal-036777	Ficedula albicollis	86.63	0.00e+00	1828.00
IUUC-Fox-037954	Fusarium oxysporum	26.42	2.00e-93	336.00
IUUC-Fso-038292	Fusarium solani	26.56	2.00e-95	342.00
IUUC-Gmo-038815	Gadus morhua	79.75	0.00e+00	892.00
IUUC-Ggr-039907	Gaeumannomyces graminis	25.33	4.00e-81	295.00
IUUC-Gga-040995	Gallus gallus	86.74	0.00e+00	1832.00
IUUC-Gac-042390	Gasterosteus aculeatus	86.35	0.00e+00	1811.00
IUUC-Gma-042904	Glycine max	52.29	0.00e+00	1032.00
IUUC-Ggo-044891	Gorilla gorilla	86.74	0.00e+00	1835.00
IUUC-Hsa-046709	Homo sapiens	86.74	0.00e+00	1835.00
IUUC-Hvu-047504	Hordeum vulgare	52.10	0.00e+00	1048.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	86.94	0.00e+00	1837.00
IUUC-Lch-050565	Latimeria chalumnae	86.64	0.00e+00	1832.00
IUUC-Lpe-051260	Leersia perrieri	52.98	0.00e+00	1073.00
IUUC-Loc-052091	Lepisosteus oculatus	79.39	0.00e+00	1274.00
IUUC-Lma-053246	Leptosphaeria maculans	27.13	1.00e-101	362.00
IUUC-Laf-053502	Loxodonta africana	86.64	0.00e+00	1834.00
IUUC-Mcc-054802	Macaca mulatta	86.74	0.00e+00	1834.00
IUUC-Meu-056808	Macropus eugenii	83.36	0.00e+00	1283.00
IUUC-Mor-057253	Magnaporthe oryzae	25.58	3.00e-66	245.00
IUUC-Mpo-057562	Magnaporthe poae	25.43	6.00e-82	297.00
IUUC-Mtr-057743	Medicago truncatula	51.80	0.00e+00	1050.00
IUUC-Mla-059154	Melampsora laricipopulina	24.41	8.00e-71	261.00
IUUC-Mga-059824	Meleagris gallopavo	86.48	0.00e+00	1741.00
IUUC-Mvi-060279	Microbotryum violaceum	26.84	5.00e-96	344.00
IUUC-Mmr-061215	Microcebus murinus	86.74	0.00e+00	1833.00
IUUC-Mdo-062028	Monodelphis domestica	85.73	0.00e+00	1509.00
IUUC-Mmu-064327	Mus musculus	86.84	0.00e+00	1836.00
IUUC-Mac-065445	Musa acuminata	53.65	0.00e+00	1065.00
IUUC-Mpu-065814	Mustela putorius furo	83.69	0.00e+00	1747.00
IUUC-Mlu-067136	Myotis lucifugus	87.13	0.00e+00	1834.00
IUUC-Nfi-068355	Neosartorya fischeri	27.56	1.00e-101	363.00
IUUC-Ncr-068620	Neurospora crassa	25.54	2.00e-80	292.00
IUUC-Nle-069566	Nomascus leucogenys	86.64	0.00e+00	1824.00
IUUC-Opr-070915	Ochotona princeps	83.24	0.00e+00	1498.00
IUUC-Ont-071753	Oreochromis niloticus	86.44	0.00e+00	1816.00
IUUC-Oan-073187	Ornithorhynchus anatinus	86.24	0.00e+00	1665.00
IUUC-Ocu-074619	Oryctolagus cuniculus	86.84	0.00e+00	1837.00
IUUC-Oba-075091	Oryza barthii	51.51	0.00e+00	744.00
IUUC-Obr-076425	Oryza brachyantha	53.17	0.00e+00	1078.00
IUUC-Ogu-078794	Oryza glumaepatula	52.98	0.00e+00	1075.00
IUUC-Oin-079725	Oryza indica	52.68	0.00e+00	1063.00
IUUC-Olo-080842	Oryza longistaminata	51.34	0.00e+00	1003.00
IUUC-Ome-081818	Oryza meridionalis	53.07	0.00e+00	1077.00
IUUC-Oni-082879	Oryza nivara	52.29	0.00e+00	1052.00
IUUC-Opu-083361	Oryza punctata	52.21	0.00e+00	1065.00
IUUC-Oru-084781	Oryza rufipogon	52.98	0.00e+00	1075.00
IUUC-Osa-086293	Oryza sativa	52.98	0.00e+00	1075.00
IUUC-Ola-086881	Oryzias latipes	86.36	0.00e+00	1808.00
IUUC-Olu-087674	Ostreococcus lucimarinus	46.02	0.00e+00	853.00
IUUC-Oga-089056	Otolemur garnettii	86.74	0.00e+00	1832.00
IUUC-Oar-089457	Ovis aries	86.74	0.00e+00	1831.00
IUUC-Ptr-091179	Pan troglodytes	86.74	0.00e+00	1834.00
IUUC-Pan-092019	Papio anubis	86.57	0.00e+00	1830.00
IUUC-Psi-093407	Pelodiscus sinensis	86.18	0.00e+00	1824.00
IUUC-Pno-094864	Phaeosphaeria nodorum	26.14	1.00e-99	356.00
IUUC-Ppa-095885	Physcomitrella patens	53.00	0.00e+00	1066.00
IUUC-Pfo-096083	Poecilia formosa	87.03	0.00e+00	1825.00
IUUC-Pab-098652	Pongo abelii	82.75	0.00e+00	1722.00
IUUC-Pop-099593	Populus trichocarpa	52.78	0.00e+00	1025.00
IUUC-Pca-100189	Procavia capensis	85.04	0.00e+00	987.00
IUUC-Ppe-101987	Prunus persica	52.58	0.00e+00	1013.00
IUUC-Pva-102605	Pteropus vampyrus	86.64	0.00e+00	1830.00
IUUC-Pgr-103659	Puccinia graminis	25.00	6.00e-66	244.00
IUUC-Ptt-103884	Puccinia triticina	22.77	1.00e-53	204.00
IUUC-Pte-104233	Pyrenophora teres	26.12	3.00e-104	371.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	26.80	5.00e-102	364.00
IUUC-Rno-106004	Rattus norvegicus	86.74	0.00e+00	1834.00
IUUC-Sha-106726	Sarcophilus harrisii	84.71	0.00e+00	1685.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	24.68	2.00e-64	239.00
IUUC-Spo-108029	Schizosaccharomyces pombe	25.45	4.00e-85	308.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	26.38	1.00e-79	290.00
IUUC-Smo-108808	Selaginella moellendorffii	52.82	0.00e+00	1103.00
IUUC-Sit-109735	Setaria italica	53.07	0.00e+00	1076.00
IUUC-Sly-111520	Solanum lycopersicum	52.09	0.00e+00	1039.00
IUUC-Sar-113606	Sorex araneus	82.50	2.00e-116	412.00
IUUC-Sbi-114539	Sorghum bicolor	52.19	0.00e+00	1063.00
IUUC-Sre-114936	Sporisorium reilianum	25.36	5.00e-56	212.00
IUUC-Ssc-116038	Sus scrofa	86.74	0.00e+00	1832.00
IUUC-Tgu-117512	Taeniopygia guttata	86.74	0.00e+00	1830.00
IUUC-Tru-117593	Takifugu rubripes	85.77	0.00e+00	1796.00
IUUC-Tsy-119513	Tarsius syrichta	82.31	0.00e+00	1055.00
IUUC-Tni-120551	Tetraodon nigroviridis	80.18	0.00e+00	1461.00
IUUC-Tca-121505	Theobroma cacao	53.26	0.00e+00	1048.00
IUUC-Tre-122136	Trichoderma reesei	25.98	4.00e-88	318.00
IUUC-Tvi-122512	Trichoderma virens	25.14	4.00e-86	311.00
IUUC-Tae-124186	Triticum aestivum	52.10	0.00e+00	1050.00
IUUC-Tur-126451	Triticum urartu	52.75	0.00e+00	966.00
IUUC-Tme-127057	Tuber melanosporum	28.38	4.00e-110	391.00
IUUC-Ttr-128891	Tursiops truncatus	82.23	0.00e+00	1146.00
IUUC-Uma-129583	Ustilago maydis	25.89	9.00e-47	181.00
IUUC-Vda-129870	Verticillium dahliae	24.18	6.00e-78	284.00
IUUC-Vpa-130117	Vicugna pacos	81.69	0.00e+00	1533.00
IUUC-Vvi-131033	Vitis vinifera	52.48	0.00e+00	1058.00
IUUC-Xtr-131987	Xenopus tropicalis	83.95	0.00e+00	1752.00
IUUC-Xma-134117	Xiphophorus maculatus	85.32	0.00e+00	1776.00
IUUC-Zma-134758	Zea mays	53.46	0.00e+00	1076.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence