iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111520

Ensembl Protein ID

Solyc02g021650.2.1

UniProt Accession

K4B513; K4B513_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g021650.2	Solyc02g021650.2.1	Solyc02g021650.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DDB1	0	1629.4	742	1095

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DDB1

   S: 784  seleenevnfllvlDkntfelllaqdlrewEtavsllSqklkdDseeyyvvktalvlpeenelkkgrilvfsvedslklkLltvaekkv 872
           s++++ e++f+++lD++tfe++++++l+++E+++s+lS+++ dDs++yy+++ta+v+peene++kgrilvf+ved+   kL+ +aek++
   Q: 742  SNADDPEMHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFSDDSNVYYCIGTAYVMPEENEPTKGRILVFIVEDG---KLQLIAEKET 827
           6778899*********************************************************************...********** PP
   S: 873  kgavidlvklNgkllaainseirlyewkvmgtd.ekelrkeCernntilaLtlktrkdfivVgDlmrsvtLllykdlegsfeEsardyn 960
           kgav++l+++Ngkllaain++i+ly+w  ++++  +el++eC+++++ilaL+++tr+dfivVgDlm+s++Ll++k++eg++eE+ardyn
   Q: 828  KGAVYSLNAFNGKLLAAINQKIQLYKWASREDGgSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEGAIEERARDYN 916
           ***************************998775267***************************************************** PP
   S: 961  lewmsaveilnddiflgaencgNlfvvkkdikagltdeerslleevgefrlgefvevfrfgtlvlqdvgerevnrssevifgtengeig 1049
           ++wmsaveil+ddi+lgaen++Nlf+v+k+ ++g+tdeers+le+vge++lgefv++fr+g+lv++ + +++v+++++vifgt+ng+ig
   Q: 917  ANWMSAVEILDDDIYLGAENNFNLFTVRKN-SEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSDVGQIPTVIFGTVNGVIG 1003
           ******************************.***********************************98.******************** PP
   S: 1050 vilrlrrellkflrnlestlkkvikrvakieHssyRsFetekrterasgfvdgdLiesilDlsrdkavdilkvlyekrwnskkevsvee 1138
           vi++l++++++fl++l+++l+kvik+v++++H+++RsF +ek+t  a++f+dgdLies+lDlsr+++++i+k +         +v vee
   Q: 1004 VIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAM---------SVPVEE 1083
           **************************************************************************.........99**** PP
   S: 1139 ivKlveelkrlh 1150
           ++K+veel+rlh
   Q: 1084 LMKRVEELTRLH 1095
           **********98 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSVWNYVVTA HKPTNVTHSC VGNFTGPQEL NLIIAKCTRI EIHLLTPQGL QCICLQPMLD 60
VPIYGRIATL ELFRPHGETQ DLLFIATERY KFCVLQWDTE ASEVITRAMG DVSDRIGRPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAACTCTGT CAACATACTA GATGTTTCTC TTCATTGCCG ATATATATAT GCTGTGTCTC 60
GTTTTCCCCC ATTTGTGTCT CTTTTCTATT TTCAAGTGAT TCAACTGAAA CAAGTATTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	78.17	0.00e+00	1832.00
IUUC-Aml-002096	Ailuropoda melanoleuca	52.04	0.00e+00	1168.00
IUUC-Atr-002742	Amborella trichopoda	85.66	0.00e+00	1919.00
IUUC-Apl-003624	Anas platyrhynchos	51.75	0.00e+00	1133.00
IUUC-Aca-005085	Anolis carolinensis	52.17	0.00e+00	1165.00
IUUC-Aly-005857	Arabidopsis lyrata	88.68	0.00e+00	2012.00
IUUC-Ath-006658	Arabidopsis thaliana	88.40	0.00e+00	2010.00
IUUC-Acl-008149	Aspergillus clavatus	29.58	1.00e-120	427.00
IUUC-Afl-008549	Aspergillus flavus	30.13	2.00e-119	423.00
IUUC-Afu-009076	Aspergillus fumigatus	30.27	2.00e-129	456.00
IUUC-Ani-009302	Aspergillus nidulans	27.91	6.00e-104	371.00
IUUC-Ang-009636	Aspergillus niger	28.83	4.00e-103	369.00
IUUC-Aor-010073	Aspergillus oryzae	30.39	4.00e-127	448.00
IUUC-Ate-010422	Aspergillus terreus	29.56	4.00e-121	428.00
IUUC-Ame-011643	Astyanax mexicanus	46.31	0.00e+00	973.00
IUUC-Bgr-012164	Blumeria graminis	28.89	1.00e-115	410.00
IUUC-Bta-012494	Bos taurus	52.04	0.00e+00	1168.00
IUUC-Bci-013957	Botrytis cinerea	28.85	3.00e-111	395.00
IUUC-Bdi-014186	Brachypodium distachyon	80.84	0.00e+00	1831.00
IUUC-Bol-015922	Brassica oleracea	88.04	0.00e+00	1995.00
IUUC-Bra-017300	Brassica rapa	87.85	0.00e+00	1988.00
IUUC-Cel-018239	Caenorhabditis elegans	33.74	1.00e-177	616.00
IUUC-Cja-019165	Callithrix jacchus	51.95	0.00e+00	1166.00
IUUC-Cfa-020406	Canis familiaris	52.04	0.00e+00	1168.00
IUUC-Cpo-022154	Cavia porcellus	52.04	0.00e+00	1167.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	49.43	0.00e+00	1008.00
IUUC-Csa-024061	Chlorocebus sabaeus	51.95	0.00e+00	1166.00
IUUC-Cho-024554	Choloepus hoffmanni	47.73	5.00e-134	471.00
IUUC-Cin-025466	Ciona intestinalis	48.45	0.00e+00	1055.00
IUUC-Csv-026370	Ciona savignyi	47.53	0.00e+00	948.00
IUUC-Cgl-026595	Colletotrichum gloeosporioides	28.86	8.00e-117	414.00
IUUC-Cme-027342	Cyanidioschyzon merolae	30.06	1.00e-138	487.00
IUUC-Dre-027448	Danio rerio	51.69	4.00e-162	563.00
IUUC-Dno-029794	Dasypus novemcinctus	52.39	0.00e+00	1111.00
IUUC-Dor-030789	Dipodomys ordii	44.56	5.00e-116	411.00
IUUC-Dse-031491	Dothistroma septosporum	29.31	1.00e-128	454.00
IUUC-Dme-031940	Drosophila melanogaster	47.01	0.00e+00	989.00
IUUC-Ete-032913	Echinops telfairi	50.50	2.00e-111	396.00
IUUC-Eca-033777	Equus caballus	51.78	0.00e+00	1159.00
IUUC-Eeu-034900	Erinaceus europaeus	49.25	5.00e-163	568.00
IUUC-Fca-035869	Felis catus	52.04	0.00e+00	1168.00
IUUC-Fal-036777	Ficedula albicollis	52.08	0.00e+00	1160.00
IUUC-Fox-037954	Fusarium oxysporum	28.09	5.00e-120	425.00
IUUC-Fso-038292	Fusarium solani	27.84	7.00e-119	421.00
IUUC-Gmo-038815	Gadus morhua	46.37	2.00e-149	522.00
IUUC-Ggr-039907	Gaeumannomyces graminis	26.51	3.00e-113	402.00
IUUC-Gga-040995	Gallus gallus	52.22	0.00e+00	1169.00
IUUC-Gac-042390	Gasterosteus aculeatus	51.81	0.00e+00	1094.00
IUUC-Gma-042743	Glycine max	89.86	0.00e+00	1999.00
IUUC-Ggo-044891	Gorilla gorilla	51.82	0.00e+00	1161.00
IUUC-Hsa-046709	Homo sapiens	51.95	0.00e+00	1166.00
IUUC-Hvu-047504	Hordeum vulgare	81.57	0.00e+00	1857.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	52.13	0.00e+00	1169.00
IUUC-Lch-050565	Latimeria chalumnae	52.21	0.00e+00	1167.00
IUUC-Lpe-051260	Leersia perrieri	82.57	0.00e+00	1857.00
IUUC-Loc-052091	Lepisosteus oculatus	47.15	0.00e+00	781.00
IUUC-Lma-053246	Leptosphaeria maculans	28.24	2.00e-122	433.00
IUUC-Laf-053502	Loxodonta africana	52.13	0.00e+00	1168.00
IUUC-Mcc-054802	Macaca mulatta	52.25	0.00e+00	1157.00
IUUC-Meu-056808	Macropus eugenii	53.14	0.00e+00	763.00
IUUC-Mor-057253	Magnaporthe oryzae	27.25	8.00e-105	374.00
IUUC-Mpo-057562	Magnaporthe poae	26.58	3.00e-110	392.00
IUUC-Mtr-057743	Medicago truncatula	89.32	0.00e+00	2000.00
IUUC-Mla-059154	Melampsora laricipopulina	27.16	4.00e-92	332.00
IUUC-Mga-059824	Meleagris gallopavo	52.13	0.00e+00	1093.00
IUUC-Mvi-060279	Microbotryum violaceum	29.09	1.00e-120	427.00
IUUC-Mmr-061215	Microcebus murinus	51.69	0.00e+00	1155.00
IUUC-Mdo-062028	Monodelphis domestica	49.95	0.00e+00	931.00
IUUC-Mmu-064327	Mus musculus	52.04	0.00e+00	1167.00
IUUC-Mac-065445	Musa acuminata	86.67	0.00e+00	1924.00
IUUC-Mpu-065814	Mustela putorius furo	50.22	0.00e+00	1104.00
IUUC-Mlu-067136	Myotis lucifugus	51.95	0.00e+00	1160.00
IUUC-Nfi-068355	Neosartorya fischeri	30.33	1.00e-123	437.00
IUUC-Ncr-068620	Neurospora crassa	29.35	1.00e-119	423.00
IUUC-Nle-069566	Nomascus leucogenys	52.16	0.00e+00	1150.00
IUUC-Opr-070915	Ochotona princeps	50.85	0.00e+00	870.00
IUUC-Ont-071753	Oreochromis niloticus	52.22	0.00e+00	1162.00
IUUC-Oan-073187	Ornithorhynchus anatinus	52.55	0.00e+00	1067.00
IUUC-Ocu-074619	Oryctolagus cuniculus	52.04	0.00e+00	1169.00
IUUC-Oba-075091	Oryza barthii	79.40	0.00e+00	1250.00
IUUC-Obr-076425	Oryza brachyantha	82.33	0.00e+00	1853.00
IUUC-Ogu-078794	Oryza glumaepatula	82.57	0.00e+00	1860.00
IUUC-Oin-079725	Oryza indica	81.51	0.00e+00	1825.00
IUUC-Olo-080842	Oryza longistaminata	79.44	0.00e+00	1674.00
IUUC-Ome-081818	Oryza meridionalis	82.57	0.00e+00	1860.00
IUUC-Oni-082879	Oryza nivara	82.03	0.00e+00	1838.00
IUUC-Opu-083361	Oryza punctata	81.55	0.00e+00	1851.00
IUUC-Oru-084781	Oryza rufipogon	82.57	0.00e+00	1860.00
IUUC-Osa-086293	Oryza sativa	82.57	0.00e+00	1860.00
IUUC-Ola-086881	Oryzias latipes	51.95	0.00e+00	1154.00
IUUC-Olu-087674	Ostreococcus lucimarinus	55.30	0.00e+00	1162.00
IUUC-Oga-089056	Otolemur garnettii	51.95	0.00e+00	1167.00
IUUC-Oar-089457	Ovis aries	52.28	0.00e+00	1157.00
IUUC-Ptr-091179	Pan troglodytes	51.90	0.00e+00	1147.00
IUUC-Pan-092019	Papio anubis	51.73	0.00e+00	1156.00
IUUC-Psi-093407	Pelodiscus sinensis	52.07	0.00e+00	1146.00
IUUC-Pma-094272	Petromyzon marinus	52.09	0.00e+00	1056.00
IUUC-Pno-094864	Phaeosphaeria nodorum	29.01	4.00e-128	452.00
IUUC-Ppa-095885	Physcomitrella patens	79.75	0.00e+00	1749.00
IUUC-Pfo-096083	Poecilia formosa	52.34	0.00e+00	1163.00
IUUC-Pab-098652	Pongo abelii	50.04	0.00e+00	1068.00
IUUC-Pop-099593	Populus trichocarpa	91.05	0.00e+00	1980.00
IUUC-Pca-100189	Procavia capensis	50.00	0.00e+00	655.00
IUUC-Ppe-101987	Prunus persica	90.50	0.00e+00	1949.00
IUUC-Pva-102605	Pteropus vampyrus	51.87	0.00e+00	1163.00
IUUC-Pgr-103659	Puccinia graminis	26.46	3.00e-75	276.00
IUUC-Ptt-103884	Puccinia triticina	24.45	2.00e-61	231.00
IUUC-Pte-104233	Pyrenophora teres	29.56	1.00e-131	463.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	29.70	3.00e-129	455.00
IUUC-Rno-106004	Rattus norvegicus	52.13	0.00e+00	1169.00
IUUC-Sha-106726	Sarcophilus harrisii	51.21	0.00e+00	1054.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	25.37	5.00e-87	315.00
IUUC-Spo-108029	Schizosaccharomyces pombe	26.96	9.00e-117	414.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	27.24	2.00e-102	366.00
IUUC-Smo-108808	Selaginella moellendorffii	78.92	0.00e+00	1813.00
IUUC-Sit-109735	Setaria italica	82.23	0.00e+00	1860.00
IUUC-Sar-113606	Sorex araneus	51.65	1.00e-63	237.00
IUUC-Sbi-114539	Sorghum bicolor	80.00	0.00e+00	1832.00
IUUC-Sre-114936	Sporisorium reilianum	24.50	6.00e-69	255.00
IUUC-Ssc-116038	Sus scrofa	52.04	0.00e+00	1167.00
IUUC-Tgu-117512	Taeniopygia guttata	52.04	0.00e+00	1160.00
IUUC-Tru-117593	Takifugu rubripes	51.56	0.00e+00	1143.00
IUUC-Tsy-119513	Tarsius syrichta	49.68	1.00e-171	596.00
IUUC-Tni-120551	Tetraodon nigroviridis	48.52	0.00e+00	907.00
IUUC-Tca-121505	Theobroma cacao	92.24	0.00e+00	2003.00
IUUC-Tre-122136	Trichoderma reesei	27.95	4.00e-116	412.00
IUUC-Tvi-122512	Trichoderma virens	28.38	1.00e-121	430.00
IUUC-Tae-124186	Triticum aestivum	81.66	0.00e+00	1860.00
IUUC-Tur-126451	Triticum urartu	81.53	0.00e+00	1667.00
IUUC-Tme-127057	Tuber melanosporum	30.79	1.00e-122	433.00
IUUC-Ttr-128891	Tursiops truncatus	49.94	0.00e+00	732.00
IUUC-Uma-129583	Ustilago maydis	27.30	2.00e-67	250.00
IUUC-Vda-129870	Verticillium dahliae	26.60	1.00e-104	374.00
IUUC-Vpa-130117	Vicugna pacos	48.67	0.00e+00	867.00
IUUC-Vvi-131033	Vitis vinifera	92.42	0.00e+00	2051.00
IUUC-Xtr-131987	Xenopus tropicalis	51.95	0.00e+00	1146.00
IUUC-Xma-134117	Xiphophorus maculatus	51.60	0.00e+00	1134.00
IUUC-Zma-134758	Zea mays	82.48	0.00e+00	1864.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence