iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121505

Ensembl Protein ID

EOX96950

UniProt Accession

A0A061DW67; A0A061DW67_THECC

Genbank Protein ID

EOX96950.1

Protein Name

Damaged DNA binding protein 1A isoform 1

Genbank Nucleotide ID

CM001880

Gene Name

TCM_006077

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_006077	EOX96950	EOX96950
TCM_006077	EOX96951	EOX96951

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DDB1	0	1670.5	735	1088

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DDB1

   S: 783  lseleenevnfllvlDkntfelllaqdlrewEtavsllSqklkdDseeyyvvktalvlpeenelkkgrilvfsvedslklkLltvaekkvkgavidlvk 881
             +++e+e++f+++lD++tfe++++++l+ +E+++s+lS+++ dD+++yy+v+ta+vlpeene++kgrilvf+ved+   kL+ +aek++kgav++l +
   Q: 735  QPSADESEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDPNVYYCVGTAYVLPEENEPTKGRILVFIVEDG---KLQLIAEKETKGAVYSLSA 830
           567899***********************************************************************...******************* PP
   S: 882  lNgkllaainseirlyewkvmgtdekelrkeCernntilaLtlktrkdfivVgDlmrsvtLllykdlegsfeEsardynlewmsaveilnddiflgaen 980
           +Ngkllaain++i+ly+w++++++++el++eC+++++ilaL+++tr+dfivVgDlm+s++Ll+yk++eg++eE+ardyn++wmsaveil+ddi+lgaen
   Q: 831  FNGKLLAAINQKIQLYKWMLREDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 929
           *************************************************************************************************** PP
   S: 981  cgNlfvvkkdikagltdeerslleevgefrlgefvevfrfgtlvlqdvgerevnrssevifgtengeigvilrlrrellkflrnlestlkkvikrvaki 1079
           ++Nlf+v+k+ ++g+tdeer +le+vge++lgefv++f++g+lv++ + +++v+++++vifgt+ng+igvi++l++e+++fl++l+s+l+kvik+v+++
   Q: 930  NFNLFTVRKN-SEGATDEERGRLEVVGEYHLGEFVNRFCHGSLVMRLP-DSDVGQIPTVIFGTVNGVIGVIASLPHEQYAFLEKLQSNLRKVIKGVGGL 1026
           **********.***********************************98.************************************************** PP
   S: 1080 eHssyRsFetekrterasgfvdgdLiesilDlsrdkavdilkvlyekrwnskkevsveeivKlveelkrlh 1150
           +H+++RsF++ek+t +a++f+dgdLies+lDlsr k+++i+k +         +vsvee+ K+veel+rlh
   Q: 1027 SHEQWRSFNNEKKTVEAKNFLDGDLIESFLDLSRGKMEEISKAM---------SVSVEELSKRVEELTRLH 1088
           ********************************************.........9***************98 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSVWNYVVTA HKPTNVTHSC VGNFTSPQEL NLIIAKCTRI EIHLLTPQGL QPMLDVPIYG 60
RIATLELFRP HGEAQDFLFI ATERYKFCVL QWDAETSELI TRAMGDVSDR IGRPTDNGQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAATAATTA TTTGAAAAGT AAATTTATAA TATAAAAATA TTAAATATTA AATATCTAAA 60
TAGGAAAAAA AATTTTGAAC ATTTCAAATA AGAAAATAAA TAAATAAAAT AGTAAAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair

KEGG

tcc:TCM_006077

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	80.07	0.00e+00	1857.00
IUUC-Aml-002096	Ailuropoda melanoleuca	52.75	0.00e+00	1196.00
IUUC-Atr-002742	Amborella trichopoda	87.88	0.00e+00	1956.00
IUUC-Apl-003624	Anas platyrhynchos	52.25	0.00e+00	1154.00
IUUC-Aca-005085	Anolis carolinensis	52.88	0.00e+00	1192.00
IUUC-Aly-005857	Arabidopsis lyrata	92.00	0.00e+00	2078.00
IUUC-Ath-006658	Arabidopsis thaliana	91.45	0.00e+00	2071.00
IUUC-Acl-008149	Aspergillus clavatus	29.94	3.00e-123	435.00
IUUC-Afl-008549	Aspergillus flavus	30.12	7.00e-123	434.00
IUUC-Afu-009076	Aspergillus fumigatus	30.43	5.00e-133	468.00
IUUC-Ani-009302	Aspergillus nidulans	28.60	2.00e-110	393.00
IUUC-Ang-009636	Aspergillus niger	29.01	1.00e-105	377.00
IUUC-Aor-010073	Aspergillus oryzae	30.46	4.00e-130	458.00
IUUC-Ate-010422	Aspergillus terreus	29.65	2.00e-126	446.00
IUUC-Ame-011643	Astyanax mexicanus	47.32	0.00e+00	1009.00
IUUC-Bgr-012164	Blumeria graminis	28.98	2.00e-119	422.00
IUUC-Bta-012494	Bos taurus	52.75	0.00e+00	1194.00
IUUC-Bci-013957	Botrytis cinerea	30.08	2.00e-117	416.00
IUUC-Bdi-014186	Brachypodium distachyon	83.49	0.00e+00	1868.00
IUUC-Bol-015922	Brassica oleracea	91.64	0.00e+00	2071.00
IUUC-Bra-017300	Brassica rapa	91.45	0.00e+00	2061.00
IUUC-Cel-018239	Caenorhabditis elegans	33.33	2.00e-175	609.00
IUUC-Cja-019165	Callithrix jacchus	52.66	0.00e+00	1194.00
IUUC-Cfa-020406	Canis familiaris	52.75	0.00e+00	1196.00
IUUC-Cpo-022154	Cavia porcellus	52.75	0.00e+00	1194.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	49.56	0.00e+00	1000.00
IUUC-Csa-024061	Chlorocebus sabaeus	52.66	0.00e+00	1194.00
IUUC-Cho-024554	Choloepus hoffmanni	48.58	7.00e-138	484.00
IUUC-Cin-025466	Ciona intestinalis	49.65	0.00e+00	1077.00
IUUC-Csv-026370	Ciona savignyi	48.35	0.00e+00	961.00
IUUC-Cgl-026595	Colletotrichum gloeosporioides	28.11	2.00e-117	416.00
IUUC-Cme-027342	Cyanidioschyzon merolae	30.02	6.00e-136	478.00
IUUC-Dre-027448	Danio rerio	52.14	9.00e-165	572.00
IUUC-Dno-029794	Dasypus novemcinctus	53.15	0.00e+00	1140.00
IUUC-Dor-030789	Dipodomys ordii	46.33	5.00e-122	431.00
IUUC-Dse-031491	Dothistroma septosporum	29.63	4.00e-129	455.00
IUUC-Dme-031940	Drosophila melanogaster	46.82	0.00e+00	989.00
IUUC-Ete-032913	Echinops telfairi	55.69	6.00e-82	298.00
IUUC-Eca-033777	Equus caballus	52.49	0.00e+00	1187.00
IUUC-Eeu-034900	Erinaceus europaeus	50.50	2.00e-169	589.00
IUUC-Fca-035869	Felis catus	52.75	0.00e+00	1196.00
IUUC-Fal-036777	Ficedula albicollis	52.53	0.00e+00	1183.00
IUUC-Fox-037954	Fusarium oxysporum	27.92	4.00e-120	425.00
IUUC-Fso-038292	Fusarium solani	27.61	5.00e-118	418.00
IUUC-Gmo-038815	Gadus morhua	47.27	5.00e-153	534.00
IUUC-Ggr-039907	Gaeumannomyces graminis	26.48	6.00e-113	401.00
IUUC-Gga-040995	Gallus gallus	52.66	0.00e+00	1192.00
IUUC-Gac-042390	Gasterosteus aculeatus	52.55	0.00e+00	1120.00
IUUC-Gma-042904	Glycine max	94.03	0.00e+00	2036.00
IUUC-Ggo-044891	Gorilla gorilla	52.53	0.00e+00	1190.00
IUUC-Hsa-046709	Homo sapiens	52.66	0.00e+00	1194.00
IUUC-Hvu-047504	Hordeum vulgare	83.58	0.00e+00	1882.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	52.84	0.00e+00	1196.00
IUUC-Lch-050565	Latimeria chalumnae	52.66	0.00e+00	1188.00
IUUC-Lpe-051260	Leersia perrieri	84.86	0.00e+00	1890.00
IUUC-Loc-052091	Lepisosteus oculatus	47.95	0.00e+00	803.00
IUUC-Lma-053246	Leptosphaeria maculans	29.05	1.00e-123	436.00
IUUC-Laf-053502	Loxodonta africana	52.84	0.00e+00	1195.00
IUUC-Mcc-054802	Macaca mulatta	53.37	0.00e+00	1186.00
IUUC-Meu-056808	Macropus eugenii	53.96	0.00e+00	783.00
IUUC-Mor-057253	Magnaporthe oryzae	27.39	2.00e-105	376.00
IUUC-Mpo-057562	Magnaporthe poae	26.60	3.00e-111	395.00
IUUC-Mtr-057743	Medicago truncatula	92.75	0.00e+00	2046.00
IUUC-Mla-059154	Melampsora laricipopulina	26.45	4.00e-93	335.00
IUUC-Mga-059824	Meleagris gallopavo	52.27	0.00e+00	1107.00
IUUC-Mvi-060279	Microbotryum violaceum	29.10	2.00e-124	439.00
IUUC-Mmr-061215	Microcebus murinus	52.40	0.00e+00	1185.00
IUUC-Mdo-062028	Monodelphis domestica	50.20	0.00e+00	946.00
IUUC-Mmu-064327	Mus musculus	52.93	0.00e+00	1196.00
IUUC-Mac-065445	Musa acuminata	89.07	0.00e+00	1963.00
IUUC-Mpu-065814	Mustela putorius furo	51.00	0.00e+00	1134.00
IUUC-Mlu-067136	Myotis lucifugus	52.84	0.00e+00	1188.00
IUUC-Nfi-068355	Neosartorya fischeri	30.26	1.00e-127	450.00
IUUC-Ncr-068620	Neurospora crassa	29.47	1.00e-124	440.00
IUUC-Nle-069566	Nomascus leucogenys	53.28	0.00e+00	1176.00
IUUC-Opr-070915	Ochotona princeps	51.37	0.00e+00	887.00
IUUC-Ont-071753	Oreochromis niloticus	53.01	0.00e+00	1189.00
IUUC-Oan-073187	Ornithorhynchus anatinus	52.79	0.00e+00	1082.00
IUUC-Ocu-074619	Oryctolagus cuniculus	52.75	0.00e+00	1196.00
IUUC-Oba-075091	Oryza barthii	81.47	0.00e+00	1271.00
IUUC-Obr-076425	Oryza brachyantha	84.44	0.00e+00	1884.00
IUUC-Ogu-078794	Oryza glumaepatula	84.68	0.00e+00	1894.00
IUUC-Oin-079725	Oryza indica	83.38	0.00e+00	1855.00
IUUC-Olo-080842	Oryza longistaminata	81.35	0.00e+00	1704.00
IUUC-Ome-081818	Oryza meridionalis	84.59	0.00e+00	1888.00
IUUC-Oni-082879	Oryza nivara	84.13	0.00e+00	1870.00
IUUC-Opu-083361	Oryza punctata	83.71	0.00e+00	1886.00
IUUC-Oru-084781	Oryza rufipogon	84.68	0.00e+00	1895.00
IUUC-Osa-086293	Oryza sativa	84.68	0.00e+00	1895.00
IUUC-Ola-086881	Oryzias latipes	52.57	0.00e+00	1181.00
IUUC-Olu-087674	Ostreococcus lucimarinus	55.92	0.00e+00	1174.00
IUUC-Oga-089056	Otolemur garnettii	52.66	0.00e+00	1194.00
IUUC-Oar-089457	Ovis aries	53.46	0.00e+00	1186.00
IUUC-Ptr-091179	Pan troglodytes	52.62	0.00e+00	1175.00
IUUC-Pan-092019	Papio anubis	52.43	0.00e+00	1185.00
IUUC-Psi-093407	Pelodiscus sinensis	52.52	0.00e+00	1168.00
IUUC-Pma-094272	Petromyzon marinus	53.26	0.00e+00	1088.00
IUUC-Pno-094864	Phaeosphaeria nodorum	29.67	3.00e-133	468.00
IUUC-Ppa-095885	Physcomitrella patens	81.10	0.00e+00	1771.00
IUUC-Pfo-096083	Poecilia formosa	53.14	0.00e+00	1190.00
IUUC-Pab-098652	Pongo abelii	51.09	0.00e+00	1095.00
IUUC-Pop-099593	Populus trichocarpa	95.22	0.00e+00	2056.00
IUUC-Pca-100189	Procavia capensis	51.56	0.00e+00	679.00
IUUC-Ppe-101987	Prunus persica	93.20	0.00e+00	1982.00
IUUC-Pva-102605	Pteropus vampyrus	52.58	0.00e+00	1191.00
IUUC-Pgr-103659	Puccinia graminis	25.74	2.00e-73	270.00
IUUC-Ptt-103884	Puccinia triticina	23.24	4.00e-59	223.00
IUUC-Pte-104233	Pyrenophora teres	30.67	2.00e-136	479.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	30.55	1.00e-131	463.00
IUUC-Rno-106004	Rattus norvegicus	52.84	0.00e+00	1197.00
IUUC-Sha-106726	Sarcophilus harrisii	51.44	0.00e+00	1072.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	25.38	4.00e-87	315.00
IUUC-Spo-108029	Schizosaccharomyces pombe	27.19	5.00e-120	425.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	27.91	5.00e-110	391.00
IUUC-Smo-108862	Selaginella moellendorffii	80.83	0.00e+00	1848.00
IUUC-Sit-109735	Setaria italica	84.53	0.00e+00	1890.00
IUUC-Sly-111520	Solanum lycopersicum	92.24	0.00e+00	2040.00
IUUC-Sar-113606	Sorex araneus	52.89	2.00e-66	246.00
IUUC-Sbi-114539	Sorghum bicolor	81.77	0.00e+00	1857.00
IUUC-Sre-114936	Sporisorium reilianum	24.82	1.00e-70	261.00
IUUC-Ssc-116038	Sus scrofa	52.75	0.00e+00	1194.00
IUUC-Tgu-117512	Taeniopygia guttata	52.49	0.00e+00	1184.00
IUUC-Tru-117593	Takifugu rubripes	52.18	0.00e+00	1172.00
IUUC-Tsy-119513	Tarsius syrichta	50.48	6.00e-177	614.00
IUUC-Tni-120551	Tetraodon nigroviridis	48.57	0.00e+00	922.00
IUUC-Tre-122136	Trichoderma reesei	27.59	7.00e-115	408.00
IUUC-Tvi-122512	Trichoderma virens	28.08	3.00e-122	432.00
IUUC-Tae-124186	Triticum aestivum	83.58	0.00e+00	1882.00
IUUC-Tur-126451	Triticum urartu	82.93	0.00e+00	1679.00
IUUC-Tme-127057	Tuber melanosporum	30.90	4.00e-126	445.00
IUUC-Ttr-128891	Tursiops truncatus	51.55	0.00e+00	759.00
IUUC-Uma-129583	Ustilago maydis	27.53	2.00e-67	250.00
IUUC-Vda-129870	Verticillium dahliae	26.58	2.00e-107	383.00
IUUC-Vpa-130117	Vicugna pacos	49.30	0.00e+00	888.00
IUUC-Vvi-131033	Vitis vinifera	95.50	0.00e+00	2095.00
IUUC-Xtr-131987	Xenopus tropicalis	52.48	0.00e+00	1170.00
IUUC-Xma-134117	Xiphophorus maculatus	52.31	0.00e+00	1161.00
IUUC-Zma-134758	Zea mays	84.30	0.00e+00	1891.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence