iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121004

Ensembl Protein ID

EOX90618

UniProt Accession

A0A061DKU7; A0A061DKU7_THECC

Genbank Protein ID

EOX90617.1; EOX90618.1

Protein Name

Basic helix-loop-helix DNA-binding superfamily protein isoform 1; Basic helix-loop-helix-containing protein, putative isoform 1

Genbank Nucleotide ID

CM001879; CM001879

Gene Name

TCM_000034

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_000034	EOX90618	EOX90618

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.80e-09	37.3	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f   d+ +vlp CgH fh  C+  w         + +CP Cr
   Q: 101  CAICLGEFaeGDEIRVLPqCGHGFHVGCVDTW------LGSHSSCPSCR 143
           ********774449******************......99********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MTRYQRFLST AQAPPPEAVT VESDLVVILA ALLCALICVV GLIAVARCAC LRRRRTANNN 60
ASQASANKGL KKKVLQSLPK VTYNKDAAIS TDTVKFASME CAICLGEFAE GDEIRVLPQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTACAACT GTAAGCCCAC CTTGTCTTTT TCCTGCTTTT CAAGTTAAAC ACAATCCTCC 60
AAAACCCCAG TCCTTGTTTG ATGTTCCCCT AACATATATA AGCCTTTCGC ATTACTCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000545	Aegilops tauschii	56.79	2.00e-21	94.40
IUUC-Bdi-014058	Brachypodium distachyon	61.63	4.00e-26	110.00
IUUC-Hvu-047055	Hordeum vulgare	52.80	2.00e-29	120.00
IUUC-Lpe-050964	Leersia perrieri	54.23	5.00e-30	123.00
IUUC-Mac-064619	Musa acuminata	64.21	2.00e-30	124.00
IUUC-Ogl-077066	Oryza glaberrima	59.26	4.00e-22	96.70
IUUC-Oin-079740	Oryza indica	59.26	4.00e-22	96.70
IUUC-Ome-081518	Oryza meridionalis	48.50	1.00e-28	118.00
IUUC-Oni-082929	Oryza nivara	50.62	1.00e-29	121.00
IUUC-Opu-083589	Oryza punctata	51.75	4.00e-27	114.00
IUUC-Osa-086101	Oryza sativa	50.62	1.00e-29	121.00
IUUC-Pop-099472	Populus trichocarpa	56.93	2.00e-43	167.00
IUUC-Sit-110757	Setaria italica	55.67	6.00e-27	112.00
IUUC-Sbi-113838	Sorghum bicolor	59.09	7.00e-26	109.00
IUUC-Tae-124309	Triticum aestivum	56.79	8.00e-22	95.90
IUUC-Tur-126504	Triticum urartu	56.98	2.00e-24	104.00
IUUC-Vvi-131638	Vitis vinifera	70.16	4.00e-44	169.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence