iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111331

Ensembl Protein ID

Solyc09g083290.2.1

UniProt Accession

G9HPW2; G9HPW2_SOLLC

Genbank Protein ID

AEX00357.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

JN379441

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g083290.2	Solyc09g083290.2.1	Solyc09g083290.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.20e-16	61.4	120	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsl 69
           +vkv+++g+++++++dl+ + ++++L +a+++ +                         l+ se+ ++YeD+dGD++ l++D++++++v+ 
   Q: 120  FVKVCMDGAPYLRKVDLKMYKSYQELSDALAKmFSsftngnygsqgmidfmnesklmdLLNSSEYVPTYEDKDGDWM-LVGDVPWEMFVD- 208
           8*******************************62256699*****************88888***************.************. PP
   S: 70   laskksllrlliqk 83
                s++rl+i+k
   Q: 209  -----SCKRLRIMK 217
           .....********8 PP

Organism

Solanum lycopersicum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MDLKETELCL GLPGGGGGGG ELIRDNNNNN NKVNGKRGFS ETVDLKLNFH QASDDISCAM 60
ENNKMKSSVT TTKEVVCNKD PIKPPAKAQV VGWPPVRSFR KNVMAQKSNT EESEKTTAAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCTTAAAC TTTTGTTACT ATTAACTATA CTTATATTAT TTTTGCATTT TCTCTCTCAA 60
TATTTTTCTC TCTCTCTCTC TATAATATTT GCATTGTACT ACTACTACTA CATATTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sly:101055547

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005642	Arabidopsis lyrata	67.13	3.00e-76	277.00
IUUC-Ath-006734	Arabidopsis thaliana	68.20	1.00e-78	285.00
IUUC-Bol-015767	Brassica oleracea	69.34	6.00e-79	285.00
IUUC-Bra-017555	Brassica rapa	69.81	2.00e-79	287.00
IUUC-Gma-043268	Glycine max	75.94	2.00e-88	317.00
IUUC-Hvu-047087	Hordeum vulgare	79.22	3.00e-68	249.00
IUUC-Lpe-050724	Leersia perrieri	51.75	9.00e-48	182.00
IUUC-Mtr-058575	Medicago truncatula	73.50	2.00e-77	281.00
IUUC-Mac-065450	Musa acuminata	68.69	3.00e-76	277.00
IUUC-Ppa-095740	Physcomitrella patens	41.86	2.00e-33	135.00
IUUC-Ppe-101719	Prunus persica	77.40	1.00e-87	315.00
IUUC-Stu-112437	Solanum tuberosum	98.48	8.00e-116	408.00
IUUC-Tca-121826	Theobroma cacao	78.47	2.00e-90	324.00
IUUC-Tre-122196	Trichoderma reesei	36.00	2.90e-01	29.60
IUUC-Tae-123775	Triticum aestivum	73.60	5.00e-68	249.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence