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Tag Content
UUCD2 ID IUUC-Aly-006280
UUCD1 version UUC-ArL-01004
Ensembl Protein ID scaffold_103014.1
UniProt Accession D7KAM3; D7KAM3_ARALL
Genbank Protein ID EFH69703.1
Protein Name Transducin family protein
Genbank Nucleotide ID GL348713
Gene Name ARALYDRAFT_890220
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_103014.1 scaffold_103014.1 scaffold_103014.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.50e-32 110.9 194 228
UBD/Beta-Prp 3.10e-58 198.0 194 407
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvll 36
    H+d vt+la +++++ s s+D+t+k+W+ ++ ++
   Q: 194 HADAVTALAVNNGFIYSVSWDKTLKIWRASDLRCK 228
    99********66****************8888876 PP
   


   UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw....dlstgkcvhtlkgheds 96
    h + +t++++ ++ ++ + s+d+t+k+w++++ + +s++ h+++v+av s +g + tgs Dr i+vw + v tl++h++
   Q: 194 HADAVTALAV--NNGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAVAVSTNG-TVYTGSADRRIRVWakptGEKRHRLVATLEKHKSA 282
    7778898999..9999***************************************9.9*************7442223667788999***** PP
   S: 97 vlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltgghtds 182
    v +l+++ +g++l sGs dr i vw+ e + + + l+ghd+++ ++ + +ll sGs+Drtvr+W+ ++ ++l+ l+g ht++
   Q: 283 VNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAvrgALRGHDKAILSLFNVS--DLLLSGSADRTVRIWRRgpdSSYSCLEVLSG-HTKP 371
    *************************9999998888899*********9999888..9****************9*99*********9.**** PP
   S: 183 vyslsfdsng.....kelvsgsldgtvklwdlqtge 213
    v+sl+ +++ ++vsgsldg vk w ++ ++
   Q: 372 VKSLAAVREKelddvVSIVSGSLDGEVKCWKVSVTK 407
    *****7777778888***************998554 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MRVISKLFDS DRRRTPKSPK HLDSDESFTL SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ 60
KIPSTTVTVS HCVTSSFKLR ERSLPVTCLA VNGGYLFAVS GHEVSIYDRD MCAHLDTFNG 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-006280|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTTTACCAAA CATCGGAACC ATGAGGGTTA TCTCAAAGCT GTTCGATTCC GACAGAAGAC 60
GAACACCGAA ATCGCCGAAG CATTTGGATT CCGACGAAAG CTTCACGTTA TCTTCATCAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-006280|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

KEGG aly:ARALYDRAFT_890220
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002783 Amborella trichopoda 53.24 8.00e-101 359.00
IUUC-Ath-006951 Arabidopsis thaliana 97.37 0.00e+00 738.00
IUUC-Bdi-014607 Brachypodium distachyon 44.80 2.00e-75 275.00
IUUC-Bol-015247 Brassica oleracea 84.87 0.00e+00 683.00
IUUC-Bra-017464 Brassica rapa 84.63 0.00e+00 688.00
IUUC-Gma-043162 Glycine max 66.47 8.00e-129 453.00
IUUC-Hvu-047304 Hordeum vulgare 47.92 5.00e-80 290.00
IUUC-Mtr-057789 Medicago truncatula 64.86 6.00e-133 466.00
IUUC-Mac-065257 Musa acuminata 52.49 2.00e-97 348.00
IUUC-Oba-075265 Oryza barthii 46.90 1.00e-55 210.00
IUUC-Obr-076628 Oryza brachyantha 48.29 5.00e-70 257.00
IUUC-Ogl-076961 Oryza glaberrima 46.08 6.00e-65 240.00
IUUC-Ogu-078745 Oryza glumaepatula 47.78 2.00e-70 258.00
IUUC-Oin-079355 Oryza indica 46.08 7.00e-65 240.00
IUUC-Olo-080540 Oryza longistaminata 44.41 2.00e-58 218.00
IUUC-Ome-081476 Oryza meridionalis 46.23 3.00e-66 244.00
IUUC-Oni-082952 Oryza nivara 46.08 7.00e-65 240.00
IUUC-Oru-084480 Oryza rufipogon 45.73 4.00e-64 238.00
IUUC-Osa-086252 Oryza sativa 45.73 3.00e-64 238.00
IUUC-Olu-087837 Ostreococcus lucimarinus 29.37 6.00e-27 113.00
IUUC-Pop-100092 Populus trichocarpa 68.75 8.00e-139 486.00
IUUC-Ppe-101598 Prunus persica 69.14 3.00e-133 467.00
IUUC-Smo-108947 Selaginella moellendorffii 38.92 5.00e-49 187.00
IUUC-Sly-111566 Solanum lycopersicum 59.01 5.00e-114 403.00
IUUC-Stu-112893 Solanum tuberosum 58.31 1.00e-111 395.00
IUUC-Sbi-114568 Sorghum bicolor 49.67 3.00e-64 238.00
IUUC-Tca-121847 Theobroma cacao 68.97 4.00e-135 473.00
IUUC-Tae-124515 Triticum aestivum 48.46 8.00e-81 293.00
IUUC-Tur-126500 Triticum urartu 47.90 3.00e-79 288.00
IUUC-Vvi-130905 Vitis vinifera 57.43 2.00e-128 451.00
Created Date 25-Jun-2017

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