iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-13	50.6	245	277

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           +v++++  +d + ++s+++Dg i+++++++ ++
   Q: 245  GVNGVRIrPDqKVFASAGWDGRIRIFSWKSLRP 277
           699*****999****************988776 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MAVLPPDPVF SLRSPDMGAV NSLCFQESDR LLAGTIKGSV FLWDLQTNRS ALHFEVGSDP 60
ITSLHHTPDR LVTQEKGGTI TMFSIGGSSY VKERSIPGNH LGFCRSALHT NTSKTNEQLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCGGCCACA CTACCACGAG ACCAAACAAA AACAAACGCA AATTAGTTAA TTAATTTTAG 60
CAGTTCTAAA TATGGCTGTG CTACCACCAG ATCCTGTATT CAGCCTGCGC TCCCCCGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0035176--P:social behavior

KEGG

dme:Dmel_CG13192

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000703	Aegilops tauschii	28.50	3.00e-16	78.60
IUUC-Aml-001556	Ailuropoda melanoleuca	30.82	6.00e-30	123.00
IUUC-Atr-002691	Amborella trichopoda	27.81	1.00e-15	77.00
IUUC-Apl-003227	Anas platyrhynchos	29.38	5.00e-33	134.00
IUUC-Aly-006168	Arabidopsis lyrata	25.33	2.00e-22	99.40
IUUC-Ath-007145	Arabidopsis thaliana	25.85	9.00e-23	100.00
IUUC-Acl-008132	Aspergillus clavatus	33.85	2.00e-11	62.80
IUUC-Afl-008655	Aspergillus flavus	27.42	9.00e-14	70.50
IUUC-Afu-008778	Aspergillus fumigatus	30.57	3.00e-12	65.50
IUUC-Ang-009760	Aspergillus niger	32.00	3.00e-11	62.40
IUUC-Bgr-012119	Blumeria graminis	21.50	2.00e-20	92.40
IUUC-Bta-012556	Bos taurus	28.61	1.00e-29	122.00
IUUC-Bci-013869	Botrytis cinerea	28.70	2.00e-07	49.30
IUUC-Bdi-014151	Brachypodium distachyon	31.36	7.00e-14	70.90
IUUC-Bol-016319	Brassica oleracea	25.59	4.00e-23	101.00
IUUC-Bra-016675	Brassica rapa	33.73	4.00e-23	101.00
IUUC-Cja-019523	Callithrix jacchus	27.85	1.00e-28	119.00
IUUC-Cfa-021217	Canis familiaris	28.28	2.00e-26	112.00
IUUC-Cpo-021506	Cavia porcellus	28.10	7.00e-28	116.00
IUUC-Csa-023674	Chlorocebus sabaeus	28.76	2.00e-28	119.00
IUUC-Cgl-026723	Colletotrichum gloeosporioides	22.03	9.00e-11	60.50
IUUC-Cme-027295	Cyanidioschyzon merolae	21.26	3.00e-07	48.90
IUUC-Dre-027592	Danio rerio	30.84	1.00e-33	135.00
IUUC-Dno-029880	Dasypus novemcinctus	27.12	1.00e-22	99.80
IUUC-Dor-030266	Dipodomys ordii	36.57	5.00e-24	103.00
IUUC-Dse-031212	Dothistroma septosporum	23.70	2.00e-16	79.30
IUUC-Eca-033371	Equus caballus	29.31	1.00e-26	113.00
IUUC-Fca-035558	Felis catus	29.91	3.00e-28	117.00
IUUC-Fal-036794	Ficedula albicollis	30.84	9.00e-35	139.00
IUUC-Fso-038156	Fusarium solani	26.98	7.00e-09	54.30
IUUC-Gmo-038742	Gadus morhua	31.40	6.00e-32	130.00
IUUC-Ggr-039849	Gaeumannomyces graminis	30.43	7.00e-10	57.80
IUUC-Gga-040868	Gallus gallus	30.75	1.00e-34	139.00
IUUC-Gac-041646	Gasterosteus aculeatus	33.03	2.00e-34	139.00
IUUC-Gma-044269	Glycine max	34.55	2.00e-21	96.30
IUUC-Ggo-044553	Gorilla gorilla	29.77	3.00e-30	124.00
IUUC-Hsa-046217	Homo sapiens	29.77	3.00e-30	124.00
IUUC-Hvu-047647	Hordeum vulgare	31.95	8.00e-21	94.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	28.44	1.00e-26	112.00
IUUC-Lch-050134	Latimeria chalumnae	31.45	5.00e-30	124.00
IUUC-Lpe-051524	Leersia perrieri	34.81	4.00e-20	91.30
IUUC-Loc-051757	Lepisosteus oculatus	28.46	3.00e-27	115.00
IUUC-Laf-053733	Loxodonta africana	27.84	8.00e-24	103.00
IUUC-Mcc-055477	Macaca mulatta	28.35	5.00e-25	107.00
IUUC-Meu-056758	Macropus eugenii	24.57	2.00e-14	72.00
IUUC-Mor-057289	Magnaporthe oryzae	33.03	4.00e-11	61.60
IUUC-Mpo-057309	Magnaporthe poae	30.99	7.00e-11	61.20
IUUC-Mtr-058616	Medicago truncatula	27.07	3.00e-25	108.00
IUUC-Mga-059637	Meleagris gallopavo	27.54	1.00e-15	75.50
IUUC-Mvi-060385	Microbotryum violaceum	24.44	2.00e-14	72.40
IUUC-Mmr-061675	Microcebus murinus	29.91	1.00e-26	112.00
IUUC-Mdo-062782	Monodelphis domestica	29.17	3.00e-26	111.00
IUUC-Mmu-064058	Mus musculus	29.00	5.00e-28	117.00
IUUC-Mac-065262	Musa acuminata	30.05	5.00e-20	91.30
IUUC-Mpu-066633	Mustela putorius furo	28.97	1.00e-22	100.00
IUUC-Mlu-067333	Myotis lucifugus	27.59	6.00e-24	103.00
IUUC-Nfi-068581	Neosartorya fischeri	33.07	5.00e-11	61.60
IUUC-Ncr-068680	Neurospora crassa	45.65	3.00e-07	48.90
IUUC-Nle-069485	Nomascus leucogenys	28.57	1.00e-26	112.00
IUUC-Oan-073361	Ornithorhynchus anatinus	35.90	1.00e-21	95.90
IUUC-Ocu-073923	Oryctolagus cuniculus	28.92	5.00e-24	104.00
IUUC-Oba-075743	Oryza barthii	32.07	2.00e-20	92.80
IUUC-Obr-076879	Oryza brachyantha	32.54	5.00e-20	91.30
IUUC-Ogl-077813	Oryza glaberrima	26.06	4.00e-22	98.20
IUUC-Ogu-078196	Oryza glumaepatula	32.07	2.00e-20	92.80
IUUC-Oin-080131	Oryza indica	26.35	1.00e-22	100.00
IUUC-Olo-080613	Oryza longistaminata	32.43	4.00e-19	87.80
IUUC-Ome-081912	Oryza meridionalis	32.07	2.00e-20	92.40
IUUC-Oni-082813	Oryza nivara	33.74	3.00e-21	95.10
IUUC-Opu-083663	Oryza punctata	26.23	7.00e-24	103.00
IUUC-Oru-085102	Oryza rufipogon	25.21	1.00e-20	93.60
IUUC-Osa-086204	Oryza sativa	26.35	1.00e-22	100.00
IUUC-Ola-086541	Oryzias latipes	30.83	2.00e-29	122.00
IUUC-Olu-087776	Ostreococcus lucimarinus	33.33	3.00e-09	53.90
IUUC-Oga-088039	Otolemur garnettii	30.87	2.00e-29	121.00
IUUC-Oar-089704	Ovis aries	42.68	6.00e-16	73.90
IUUC-Ptr-091291	Pan troglodytes	29.77	3.00e-30	124.00
IUUC-Pan-092644	Papio anubis	29.43	7.00e-30	123.00
IUUC-Psi-093646	Pelodiscus sinensis	29.38	1.00e-30	126.00
IUUC-Pno-095017	Phaeosphaeria nodorum	29.20	2.00e-08	52.80
IUUC-Ppa-095698	Physcomitrella patens	26.15	1.00e-21	96.30
IUUC-Pfo-096601	Poecilia formosa	29.67	7.00e-31	126.00
IUUC-Pab-098407	Pongo abelii	29.45	4.00e-29	121.00
IUUC-Pop-099193	Populus trichocarpa	32.54	3.00e-21	95.50
IUUC-Pca-100366	Procavia capensis	29.66	2.00e-30	125.00
IUUC-Ppe-101608	Prunus persica	26.74	9.00e-26	110.00
IUUC-Pva-102775	Pteropus vampyrus	27.93	5.00e-26	110.00
IUUC-Pte-104132	Pyrenophora teres	32.38	8.00e-10	57.80
IUUC-Pyt-104808	Pyrenophora triticirepentis	35.24	7.00e-11	60.80
IUUC-Rno-105626	Rattus norvegicus	28.53	9.00e-27	113.00
IUUC-Sha-106539	Sarcophilus harrisii	28.95	5.00e-27	114.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	25.53	2.00e-13	69.30
IUUC-Spo-108326	Schizosaccharomyces pombe	34.10	2.00e-15	75.90
IUUC-Smo-109434	Selaginella moellendorffii	25.86	1.00e-20	93.20
IUUC-Sit-109771	Setaria italica	26.63	3.00e-24	105.00
IUUC-Sly-111138	Solanum lycopersicum	25.46	6.00e-23	100.00
IUUC-Stu-112425	Solanum tuberosum	25.59	2.00e-23	102.00
IUUC-Sbi-114356	Sorghum bicolor	34.32	8.00e-23	100.00
IUUC-Sre-115086	Sporisorium reilianum	24.26	5.00e-08	50.80
IUUC-Ssc-115256	Sus scrofa	27.66	1.00e-26	112.00
IUUC-Tgu-116774	Taeniopygia guttata	29.53	5.00e-27	113.00
IUUC-Tru-117900	Takifugu rubripes	30.36	4.00e-29	120.00
IUUC-Tsy-119540	Tarsius syrichta	45.12	7.00e-15	73.60
IUUC-Tni-120252	Tetraodon nigroviridis	32.04	9.00e-34	136.00
IUUC-Tca-121717	Theobroma cacao	32.92	4.00e-19	88.20
IUUC-Tre-122069	Trichoderma reesei	45.45	1.00e-08	53.50
IUUC-Tvi-122673	Trichoderma virens	24.40	3.00e-11	62.00
IUUC-Tae-123434	Triticum aestivum	32.54	4.00e-21	94.70
IUUC-Tme-127222	Tuber melanosporum	22.49	3.00e-13	68.60
IUUC-Ttr-129240	Tursiops truncatus	32.95	2.00e-20	92.40
IUUC-Vda-129913	Verticillium dahliae	22.72	4.00e-09	54.70
IUUC-Vvi-131718	Vitis vinifera	25.07	2.00e-22	99.00
IUUC-Xtr-132109	Xenopus tropicalis	30.15	5.00e-30	124.00
IUUC-Xma-133366	Xiphophorus maculatus	31.33	2.00e-32	132.00
IUUC-Zma-135563	Zea mays	24.00	6.00e-21	94.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence