iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099509

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative RING family protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_713979; POPTR_0004s04270g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s04270	POPTR_0004s04270.1	POPTR_0004s04270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	33.1	30	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C iC++   + p+v+ CgH+++  C++kw   +  +  s  + +CP+C+
   Q: 30   CNICFDFANE-PVVTLCGHLYCWPCIYKWlhvQSASLASDEHPQCPVCK 77
           99****8877.999***************99755566677788*****7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDFERYFAQG WKSVSSAAAD SESFSGCFDC NICFDFANEP VVTLCGHLYC WPCIYKWLHV 60
QSASLASDEH PQCPVCKADI SHATMVPLYG RGQGSTEAEG KAPYRGMIIP PRPSACGAQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTACCACG CTCTATCTCT CTCTCTGATC TGCAAAATTT CCATTGAAGC TTACTCGAAG 60
CCTCTCATTT TAATCAAGCC AAACGAACAC ACTGTTATTT TATCTCTAAT TTCCTTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0004s04270g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mla-059070	Melampsora laricipopulina	36.54	1.00e-07	49.30
IUUC-Mac-065357	Musa acuminata	37.79	9.00e-30	122.00
IUUC-Oba-075301	Oryza barthii	62.86	3.00e-21	95.10
IUUC-Obr-076866	Oryza brachyantha	47.01	3.00e-25	107.00
IUUC-Pgr-103282	Puccinia graminis	39.39	2.00e-08	51.60
IUUC-Sit-110543	Setaria italica	41.86	3.00e-32	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence