iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099032

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_829469; POPTR_0001s09630g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s09630	POPTR_0001s09630.1	POPTR_0001s09630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-09	37.8	161	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle++  +++ l++ C H+fh++C+  w        ++ +CP+C+
   Q: 161  CPICLEEYdlENPKLITKCEHHFHLSCILEW------MERSESCPVCD 202
           ******887788667799*************......999*******5 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGGCCCCSSK GAAQSNSAPP YYYYPRAPAE HVPLSSHHAA GSALSTGLLV DTNLDTSVPD 60
AYRPPPAPMP FDVAVGHLQT LHRSRETCGD KNDGALQTTN SASGQENTGL NTRETSAECE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGAAAGTC GTTGTCGCAC ACGAAAACAC ACCACCTGTT CCTTTCTACC AGAAAAAGAA 60
AAGAAGAAGA AGACGAAGAA AAAGAAGAGA AACAAAAGAA ATTCCGTAAG CCTCTTTTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0001s09630g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000389	Aegilops tauschii	45.98	1.00e-32	132.00
IUUC-Atr-002805	Amborella trichopoda	49.44	3.00e-39	154.00
IUUC-Gma-044261	Glycine max	61.20	3.00e-62	230.00
IUUC-Mtr-057775	Medicago truncatula	55.19	6.00e-48	182.00
IUUC-Mac-065486	Musa acuminata	50.95	2.00e-49	187.00
IUUC-Ppe-101765	Prunus persica	65.73	8.00e-54	202.00
IUUC-Stu-111977	Solanum tuberosum	52.13	7.00e-40	156.00
IUUC-Tca-121372	Theobroma cacao	67.30	3.00e-50	191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence