iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000674

Ensembl Protein ID

EMT20135

UniProt Accession

R7WFN9; R7WFN9_AEGTA

Genbank Protein ID

EMT20135.1

Protein Name

RING-H2 finger protein ATL5O

Genbank Nucleotide ID

KD527741

Gene Name

F775_22249

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_22249	EMT20135	EMT20135

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	32.9	69	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+ ++     +  + l+ CgHv+ha+C+  w       +++ +CPlCr
   Q: 69   CAICKGPLaaggGR-CRRLRaCGHVYHAECVDLW------LQRKPICPLCR 112
           ********777644.555556*************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MVDSGVAIAL GVVGFLVVVL AIAWAVRCAV ARRRAEEAKE AVGVGVGAGL LDKEAVVVDV 60
ETKREEPLCA ICKGPLAAGG GRCRRLRACG HVYHAECVDL WLQRKPICPL CRAGVVLSRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTGACT CCGGCGTGGC CATAGCTCTC GGCGTGGTCG GGTTCCTCGT GGTGGTGCTC 60
GCGATCGCCT GGGCGGTGCG CTGCGCCGTC GCCCGGCGCC GCGCCGAGGA GGCGAAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_22249

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014053	Brachypodium distachyon	64.55	6.00e-29	118.00
IUUC-Lpe-051656	Leersia perrieri	50.98	4.00e-21	92.80
IUUC-Oin-080010	Oryza indica	52.17	5.00e-22	95.90
IUUC-Olo-081081	Oryza longistaminata	52.17	3.00e-22	96.30
IUUC-Ome-081423	Oryza meridionalis	52.63	1.00e-21	94.70
IUUC-Oni-083030	Oryza nivara	52.17	5.00e-22	95.90
IUUC-Opu-083261	Oryza punctata	51.49	4.00e-19	85.90
IUUC-Sit-109767	Setaria italica	47.73	3.00e-19	87.00
IUUC-Sbi-113870	Sorghum bicolor	72.13	4.00e-20	89.70
IUUC-Tae-123703	Triticum aestivum	94.19	7.00e-30	121.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence