iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bgr-012254

Ensembl Protein ID

CCU81401

UniProt Accession

N1JLJ1; N1JLJ1_BLUG1

Genbank Protein ID

CCU81401.1

Protein Name

Putative WD repeat-containing protein/U4/U6 small nuclear ribonucleoprotein Prp4

Genbank Nucleotide ID

CAUH01004990

Gene Name

BGHDH14_bgh02255

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGHDH14_bgh02255	CCU81401	CCU81401

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-35	115.8	469	503
UBD/Beta-Prp	3.50e-55	185.7	186	415

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gHt+ v++++   d + +vsG++D t+k+W l +g
   Q: 469  GHTGNVHSVDVsRDsRWIVSGGYDRTVKLWGLPDG 503
           8***********7779***************9877 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk...........ilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
            +i+   ++p+++++a+g + g ik+ ++ +++ +r+l gh++ +  +++ pd+             +++g+  +++++w+l++ ++++tl gh+++v+ +
   Q: 186  RPISITRIAPNGEIIAAGNWGGGIKLLNIPSMSEIRTLRGHTDRIGGISWFPDATlpdkgvtsstvNIASGGAEGNVHLWSLESDTPISTLMGHNQRVCRV 286
           567777789***********************************88888888887788788888778999******************************* PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsld 201
           +f+psg +l+s+s+d t r+wd+et ++l  +++gh++ v  +++++dg+ll+s++lD++ r+Wdl+tg+ +  l+g h +++y l++  +g +++sgs d
   Q: 287  EFHPSGRYLASASEDTTWRLWDVETTTELL-LQEGHSRGVFALSFNSDGSLLASAGLDSIGRIWDLRTGRTVMILEG-HIRPIYALDWGVDGHRILSGSGD 385
           ******************************.*********************************************9.*********************** PP
   S: 202  gtvklwdlqtgecvrtlnghtdnvksvrfs 231
           g +k wd+++ +      +h++ v+++r +
   Q: 386  GWIKCWDVRKVQPSGGIGAHKSVVSDLRWF 415
           *********999999999999999998876 PP

Organism

Blumeria graminis

Protein Sequence
(Fasta)

MHPSRAAYVE EVKVESNGFN QSKVRNTGIA LERASAILSQ FDRKRRAAQI SVPTDDGRVR 60
ARLQEMGEPV TLFGEGPGDR RDRLRQLLAI EAEISAAEND DGDVRMEDSN HQNENEQEEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCATCCCT CTAGAGCTGC GTACGTGGAA GAAGTTAAGG TTGAATCTAA TGGATTTAAC 60
CAATCAAAAG TACGCAAGTA ACCCCGTCAT TACAATCTGA TACCATCTGA TCGCTTTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000498	Aegilops tauschii	34.84	2.00e-71	261.00
IUUC-Aml-001737	Ailuropoda melanoleuca	38.76	2.00e-98	351.00
IUUC-Atr-002828	Amborella trichopoda	34.58	6.00e-79	286.00
IUUC-Apl-003723	Anas platyrhynchos	38.76	2.00e-101	361.00
IUUC-Aca-004972	Anolis carolinensis	39.40	2.00e-99	353.00
IUUC-Aly-006531	Arabidopsis lyrata	33.97	2.00e-66	244.00
IUUC-Ath-007367	Arabidopsis thaliana	35.38	5.00e-80	290.00
IUUC-Ago-007893	Ashbya gossypii	34.58	4.00e-73	266.00
IUUC-Acl-008236	Aspergillus clavatus	61.38	6.00e-174	602.00
IUUC-Afl-008522	Aspergillus flavus	66.19	0.00e+00	634.00
IUUC-Afu-008904	Aspergillus fumigatus	62.43	2.00e-179	620.00
IUUC-Ani-009198	Aspergillus nidulans	61.80	0.00e+00	633.00
IUUC-Ang-009662	Aspergillus niger	61.63	2.00e-174	603.00
IUUC-Aor-009881	Aspergillus oryzae	64.86	0.00e+00	650.00
IUUC-Ate-010333	Aspergillus terreus	61.25	1.00e-168	584.00
IUUC-Ame-011697	Astyanax mexicanus	41.54	3.00e-106	377.00
IUUC-Bta-012615	Bos taurus	38.76	4.00e-99	353.00
IUUC-Bci-013720	Botrytis cinerea	70.41	0.00e+00	727.00
IUUC-Bdi-014302	Brachypodium distachyon	36.88	2.00e-81	294.00
IUUC-Bol-015594	Brassica oleracea	34.50	2.00e-69	254.00
IUUC-Bra-017465	Brassica rapa	34.23	9.00e-69	252.00
IUUC-Cel-018632	Caenorhabditis elegans	34.23	2.00e-70	257.00
IUUC-Cja-019747	Callithrix jacchus	38.76	6.00e-99	352.00
IUUC-Cfa-020288	Canis familiaris	38.76	1.00e-98	351.00
IUUC-Cpo-021440	Cavia porcellus	38.33	2.00e-98	350.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	35.96	1.00e-58	218.00
IUUC-Csa-023139	Chlorocebus sabaeus	37.68	2.00e-73	267.00
IUUC-Cho-024481	Choloepus hoffmanni	37.26	7.00e-92	328.00
IUUC-Cin-025106	Ciona intestinalis	37.82	4.00e-93	333.00
IUUC-Csv-026087	Ciona savignyi	38.68	5.00e-94	336.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	64.99	0.00e+00	681.00
IUUC-Cne-026793	Cryptococcus neoformans	43.38	2.00e-114	404.00
IUUC-Dre-028723	Danio rerio	40.30	2.00e-102	363.00
IUUC-Dno-029299	Dasypus novemcinctus	38.54	3.00e-98	350.00
IUUC-Dse-031562	Dothistroma septosporum	52.57	2.00e-154	537.00
IUUC-Dme-031783	Drosophila melanogaster	35.68	1.00e-80	292.00
IUUC-Ete-032669	Echinops telfairi	39.19	7.00e-100	355.00
IUUC-Eca-033566	Equus caballus	38.76	2.00e-98	351.00
IUUC-Eeu-034524	Erinaceus europaeus	43.46	5.00e-61	226.00
IUUC-Fca-036215	Felis catus	38.76	1.00e-98	352.00
IUUC-Fal-037018	Ficedula albicollis	40.47	1.00e-89	322.00
IUUC-Fox-037936	Fusarium oxysporum	66.47	0.00e+00	675.00
IUUC-Fso-038366	Fusarium solani	66.73	0.00e+00	698.00
IUUC-Gmo-038966	Gadus morhua	35.26	2.00e-62	230.00
IUUC-Ggr-039942	Gaeumannomyces graminis	65.84	0.00e+00	659.00
IUUC-Gga-040797	Gallus gallus	38.76	9.00e-102	362.00
IUUC-Gac-042598	Gasterosteus aculeatus	39.36	1.00e-87	315.00
IUUC-Gma-044220	Glycine max	36.15	7.00e-74	269.00
IUUC-Ggo-044682	Gorilla gorilla	38.76	2.00e-98	350.00
IUUC-Hsa-045804	Homo sapiens	38.76	8.00e-99	352.00
IUUC-Hvu-047567	Hordeum vulgare	35.48	2.00e-73	268.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	38.54	2.00e-98	350.00
IUUC-Kpa-049369	Komagataella pastoris	37.13	2.00e-71	261.00
IUUC-Lch-050074	Latimeria chalumnae	37.95	9.00e-88	315.00
IUUC-Lpe-051333	Leersia perrieri	37.17	6.00e-76	276.00
IUUC-Loc-052164	Lepisosteus oculatus	39.83	2.00e-101	360.00
IUUC-Lma-053088	Leptosphaeria maculans	55.62	2.00e-163	566.00
IUUC-Laf-053460	Loxodonta africana	38.76	7.00e-99	352.00
IUUC-Mcc-055859	Macaca mulatta	38.76	1.00e-98	352.00
IUUC-Meu-056134	Macropus eugenii	38.97	7.00e-100	355.00
IUUC-Mor-057251	Magnaporthe oryzae	61.36	1.00e-178	617.00
IUUC-Mpo-057375	Magnaporthe poae	73.93	4.00e-112	395.00
IUUC-Mtr-058546	Medicago truncatula	32.38	2.00e-67	248.00
IUUC-Mla-059145	Melampsora laricipopulina	47.21	2.00e-114	404.00
IUUC-Mga-059855	Meleagris gallopavo	38.76	1.00e-101	361.00
IUUC-Mvi-060372	Microbotryum violaceum	42.75	4.00e-93	333.00
IUUC-Mmr-060826	Microcebus murinus	38.54	2.00e-98	351.00
IUUC-Mdo-062748	Monodelphis domestica	38.97	1.00e-99	354.00
IUUC-Mmu-063351	Mus musculus	38.97	7.00e-99	352.00
IUUC-Mac-064846	Musa acuminata	35.45	8.00e-72	262.00
IUUC-Mpu-066006	Mustela putorius furo	38.76	1.00e-98	352.00
IUUC-Mlu-067398	Myotis lucifugus	38.76	2.00e-98	350.00
IUUC-Nfi-068399	Neosartorya fischeri	62.24	0.00e+00	650.00
IUUC-Ncr-068711	Neurospora crassa	64.93	0.00e+00	678.00
IUUC-Nle-069982	Nomascus leucogenys	38.76	6.00e-99	352.00
IUUC-Opr-070596	Ochotona princeps	38.97	2.00e-99	353.00
IUUC-Ont-072374	Oreochromis niloticus	39.42	3.00e-90	323.00
IUUC-Oan-073166	Ornithorhynchus anatinus	38.22	4.00e-81	292.00
IUUC-Ocu-074371	Oryctolagus cuniculus	38.97	4.00e-99	353.00
IUUC-Oba-075083	Oryza barthii	36.50	9.00e-77	278.00
IUUC-Obr-076405	Oryza brachyantha	37.09	3.00e-75	273.00
IUUC-Ogl-077683	Oryza glaberrima	36.50	1.00e-76	278.00
IUUC-Ogu-078486	Oryza glumaepatula	36.50	3.00e-76	277.00
IUUC-Oin-079679	Oryza indica	36.50	1.00e-78	285.00
IUUC-Olo-080243	Oryza longistaminata	34.89	5.00e-64	236.00
IUUC-Ome-081230	Oryza meridionalis	36.50	6.00e-79	286.00
IUUC-Oni-082961	Oryza nivara	36.50	7.00e-79	285.00
IUUC-Opu-083189	Oryza punctata	36.55	5.00e-78	283.00
IUUC-Oru-084353	Oryza rufipogon	36.40	4.00e-77	280.00
IUUC-Osa-085458	Oryza sativa	36.50	6.00e-79	286.00
IUUC-Ola-086940	Oryzias latipes	40.04	6.00e-97	345.00
IUUC-Olu-087580	Ostreococcus lucimarinus	33.20	1.00e-55	208.00
IUUC-Oga-088703	Otolemur garnettii	36.83	1.00e-89	322.00
IUUC-Oar-089829	Ovis aries	38.76	9.00e-99	352.00
IUUC-Ptr-090838	Pan troglodytes	38.76	8.00e-99	352.00
IUUC-Pan-092261	Papio anubis	38.68	3.00e-97	347.00
IUUC-Psi-093020	Pelodiscus sinensis	38.54	2.00e-100	357.00
IUUC-Pno-094858	Phaeosphaeria nodorum	55.97	1.00e-156	544.00
IUUC-Ppa-095531	Physcomitrella patens	35.82	3.00e-84	303.00
IUUC-Pfo-096812	Poecilia formosa	35.11	2.00e-74	271.00
IUUC-Pab-097805	Pongo abelii	34.65	7.00e-74	269.00
IUUC-Pop-100051	Populus trichocarpa	33.75	2.00e-72	265.00
IUUC-Pca-100152	Procavia capensis	38.76	5.00e-99	353.00
IUUC-Ppe-101244	Prunus persica	35.50	3.00e-76	276.00
IUUC-Pva-102529	Pteropus vampyrus	37.26	5.00e-91	326.00
IUUC-Pgr-103550	Puccinia graminis	42.80	8.00e-115	405.00
IUUC-Ptt-103951	Puccinia triticina	37.91	2.00e-94	338.00
IUUC-Pte-104151	Pyrenophora teres	56.59	9.00e-158	548.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	56.98	1.00e-159	554.00
IUUC-Rno-105747	Rattus norvegicus	38.97	1.00e-98	351.00
IUUC-Sce-106418	Saccharomyces cerevisiae	34.38	4.00e-77	280.00
IUUC-Sha-107334	Sarcophilus harrisii	38.97	6.00e-100	355.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	39.67	1.00e-90	325.00
IUUC-Spo-108189	Schizosaccharomyces pombe	41.98	6.00e-97	345.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	70.08	0.00e+00	728.00
IUUC-Smo-108924	Selaginella moellendorffii	33.93	3.00e-79	287.00
IUUC-Sit-110102	Setaria italica	37.01	2.00e-78	284.00
IUUC-Sly-111668	Solanum lycopersicum	35.84	8.00e-75	272.00
IUUC-Stu-111928	Solanum tuberosum	35.84	4.00e-75	273.00
IUUC-Sar-113266	Sorex araneus	33.40	9.00e-78	282.00
IUUC-Sbi-114134	Sorghum bicolor	37.23	3.00e-78	283.00
IUUC-Sre-115114	Sporisorium reilianum	44.42	3.00e-110	390.00
IUUC-Ssc-115443	Sus scrofa	38.76	9.00e-99	352.00
IUUC-Tgu-117157	Taeniopygia guttata	38.12	9.00e-101	358.00
IUUC-Tru-118587	Takifugu rubripes	39.87	2.00e-95	341.00
IUUC-Tsy-119157	Tarsius syrichta	38.22	4.00e-80	290.00
IUUC-Tni-120427	Tetraodon nigroviridis	39.91	1.00e-96	344.00
IUUC-Tca-121368	Theobroma cacao	34.58	5.00e-79	286.00
IUUC-Tre-122074	Trichoderma reesei	66.54	0.00e+00	693.00
IUUC-Tvi-122349	Trichoderma virens	65.70	0.00e+00	686.00
IUUC-Tae-124256	Triticum aestivum	36.93	1.00e-74	271.00
IUUC-Tur-126532	Triticum urartu	38.71	8.00e-71	258.00
IUUC-Tme-126951	Tuber melanosporum	54.81	2.00e-155	540.00
IUUC-Tbe-128136	Tupaia belangeri	36.40	1.00e-85	308.00
IUUC-Ttr-129169	Tursiops truncatus	40.82	5.00e-62	229.00
IUUC-Uma-129399	Ustilago maydis	42.40	7.00e-105	372.00
IUUC-Vda-129842	Verticillium dahliae	67.50	0.00e+00	681.00
IUUC-Vpa-130440	Vicugna pacos	38.76	6.00e-99	352.00
IUUC-Vvi-131075	Vitis vinifera	36.70	3.00e-77	281.00
IUUC-Xma-133002	Xiphophorus maculatus	38.32	3.00e-74	270.00
IUUC-Yli-134569	Yarrowia lipolytica	36.52	4.00e-81	293.00
IUUC-Zma-135799	Zea mays	34.63	1.00e-75	275.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence