iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114344

UUCD1 version

UUC-SoB-00069

Ensembl Protein ID

Sb07g002460.1

UniProt Accession

A0A1B6PF66; A0A1B6PF66_SORBI

Genbank Protein ID

KXG24341.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G028100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g002460	Sb07g002460.1	Sb07g002460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.60e-28	96.0	525	556
UBD/Beta-Prp	2.00e-46	159.4	262	432

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWD 29
           gH++ v+c+++  ++ ++l+s+sdD+t+++W 
   Q: 525  GHSGTVNCVSWnpTNpHMLASASDDHTVRIWG 556
           8***********755799*************7 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
            ++++l++h d+v+ ++fs +g++l+s+s+d+ + +w+++++ +l    tl gh+++v++v+++pd++ l +++  +++r Wd+++gk+l+   + 
   Q: 262  RTLQVLHAHHDEVWFIQFSNNGKYLASASNDKSAIIWEVDEDGELLLrhTLIGHQKSVMMVAWSPDDCQLLTCGQEEAIRRWDVESGKCLHVYAK- 356
           678999************************************9997778********************************************87. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssDgsiriWdlrsgd 255
             + + + ++ ++gk+++sg  d    +wdl  +e v+ ++g++ + +++ ++ +++++++s s + +i ++d ++++
   Q: 357  PVGLISC-AWFPDGKQILSGLADENFCIWDLDGNE-VDCWKGQRsTRTSDFAVAKDGNLIISMSRESTILLFDRETKQ 432
           4444444.477789*****************6555.999999883557778999*******************99986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGGFEDDEPP SKRARASSVE SASLPDYFSF SKSVNPLGST MARPLPSQGK EVMVGSKGVI 60
KKEEFVRIIT KTLYSLGYEK SGAVLEEESG IILHKPMVNL FREQVIDGNW DNAVVTLNKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCAAGCCA AACACCACCA CCCCTCCTTC CTCCCCACAC CCCCTCTCCC TACGCCTCCT 60
CGCCGCTTTC CCCACCCAAT CCGACCGCCG GGCCGCCTCC TCTCCGCCGG GGCGGGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000905	Aegilops tauschii	79.61	0.00e+00	922.00
IUUC-Aml-001381	Ailuropoda melanoleuca	38.05	1.00e-91	329.00
IUUC-Atr-002649	Amborella trichopoda	60.50	0.00e+00	739.00
IUUC-Apl-003200	Anas platyrhynchos	38.86	3.00e-89	321.00
IUUC-Aca-005122	Anolis carolinensis	40.43	2.00e-93	335.00
IUUC-Aly-006260	Arabidopsis lyrata	57.43	0.00e+00	669.00
IUUC-Ath-007549	Arabidopsis thaliana	57.17	0.00e+00	664.00
IUUC-Ago-007896	Ashbya gossypii	22.94	2.00e-34	139.00
IUUC-Acl-008259	Aspergillus clavatus	36.50	2.00e-91	328.00
IUUC-Afl-008669	Aspergillus flavus	35.73	2.00e-85	309.00
IUUC-Afu-008972	Aspergillus fumigatus	39.03	7.00e-69	253.00
IUUC-Ani-009455	Aspergillus nidulans	33.91	6.00e-73	268.00
IUUC-Ang-009832	Aspergillus niger	33.51	6.00e-79	287.00
IUUC-Aor-010221	Aspergillus oryzae	36.95	7.00e-89	320.00
IUUC-Ate-010262	Aspergillus terreus	36.48	4.00e-91	328.00
IUUC-Ame-010615	Astyanax mexicanus	39.65	3.00e-87	315.00
IUUC-Bgr-012047	Blumeria graminis	34.56	1.00e-78	286.00
IUUC-Bta-012566	Bos taurus	38.68	1.00e-88	319.00
IUUC-Bci-013589	Botrytis cinerea	32.54	3.00e-77	281.00
IUUC-Bdi-014338	Brachypodium distachyon	82.14	0.00e+00	1004.00
IUUC-Bol-015855	Brassica oleracea	58.26	0.00e+00	679.00
IUUC-Bra-017245	Brassica rapa	58.07	0.00e+00	667.00
IUUC-Cja-019082	Callithrix jacchus	38.24	4.00e-92	331.00
IUUC-Cfa-020788	Canis familiaris	38.68	1.00e-88	319.00
IUUC-Cpo-022453	Cavia porcellus	38.65	8.00e-89	320.00
IUUC-Csa-023815	Chlorocebus sabaeus	37.64	1.00e-72	266.00
IUUC-Cho-024572	Choloepus hoffmanni	38.69	2.00e-53	202.00
IUUC-Cin-025474	Ciona intestinalis	40.43	5.00e-53	200.00
IUUC-Csv-026251	Ciona savignyi	38.17	2.00e-85	308.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	31.11	2.00e-72	265.00
IUUC-Cne-026805	Cryptococcus neoformans	25.71	1.00e-42	167.00
IUUC-Cme-027218	Cyanidioschyzon merolae	27.69	9.00e-62	230.00
IUUC-Dre-027404	Danio rerio	39.17	1.00e-85	310.00
IUUC-Dno-029089	Dasypus novemcinctus	37.55	1.00e-90	326.00
IUUC-Dor-030714	Dipodomys ordii	36.84	3.00e-63	234.00
IUUC-Dse-031569	Dothistroma septosporum	30.82	2.00e-70	259.00
IUUC-Dme-032077	Drosophila melanogaster	37.74	1.00e-88	319.00
IUUC-Ete-032986	Echinops telfairi	35.44	2.00e-31	129.00
IUUC-Eca-033943	Equus caballus	38.65	7.00e-89	320.00
IUUC-Fca-036556	Felis catus	38.72	6.00e-82	297.00
IUUC-Fal-036639	Ficedula albicollis	37.18	2.00e-91	329.00
IUUC-Fox-037720	Fusarium oxysporum	31.48	2.00e-74	272.00
IUUC-Fso-038206	Fusarium solani	31.37	6.00e-71	261.00
IUUC-Gmo-039395	Gadus morhua	37.55	3.00e-85	308.00
IUUC-Ggr-039738	Gaeumannomyces graminis	32.69	2.00e-79	289.00
IUUC-Gga-040577	Gallus gallus	37.59	2.00e-92	332.00
IUUC-Gac-041352	Gasterosteus aculeatus	36.70	4.00e-90	324.00
IUUC-Gma-044009	Glycine max	62.79	0.00e+00	723.00
IUUC-Ggo-044684	Gorilla gorilla	38.24	5.00e-92	331.00
IUUC-Hsa-046838	Homo sapiens	38.24	5.00e-92	331.00
IUUC-Hvu-047226	Hordeum vulgare	79.97	0.00e+00	962.00
IUUC-Itr-048020	Ictidomys tridecemlineatus	38.24	3.00e-92	331.00
IUUC-Kpa-049141	Komagataella pastoris	30.00	4.00e-62	231.00
IUUC-Lch-049848	Latimeria chalumnae	37.62	4.00e-70	257.00
IUUC-Lpe-050963	Leersia perrieri	83.64	0.00e+00	1037.00
IUUC-Loc-052708	Lepisosteus oculatus	40.55	6.00e-93	334.00
IUUC-Lma-053156	Leptosphaeria maculans	35.44	8.00e-81	293.00
IUUC-Laf-054153	Loxodonta africana	38.05	3.00e-92	331.00
IUUC-Mcc-054742	Macaca mulatta	38.24	5.00e-92	331.00
IUUC-Meu-056633	Macropus eugenii	29.34	3.00e-26	112.00
IUUC-Mor-056939	Magnaporthe oryzae	35.69	1.00e-86	313.00
IUUC-Mpo-057600	Magnaporthe poae	33.40	2.00e-77	282.00
IUUC-Mtr-058261	Medicago truncatula	61.04	0.00e+00	708.00
IUUC-Mla-058912	Melampsora laricipopulina	37.53	3.00e-79	288.00
IUUC-Mga-059811	Meleagris gallopavo	36.48	6.00e-74	270.00
IUUC-Mvi-060274	Microbotryum violaceum	37.29	4.00e-89	322.00
IUUC-Mmr-060823	Microcebus murinus	38.24	2.00e-92	332.00
IUUC-Mdo-062394	Monodelphis domestica	39.92	5.00e-93	335.00
IUUC-Mmu-063924	Mus musculus	38.05	3.00e-92	332.00
IUUC-Mac-065563	Musa acuminata	69.73	0.00e+00	843.00
IUUC-Mpu-066858	Mustela putorius furo	38.91	7.00e-91	327.00
IUUC-Mlu-067659	Myotis lucifugus	38.24	5.00e-92	331.00
IUUC-Nfi-068498	Neosartorya fischeri	37.12	7.00e-89	320.00
IUUC-Ncr-068832	Neurospora crassa	31.88	3.00e-71	261.00
IUUC-Nle-069654	Nomascus leucogenys	38.68	1.00e-88	319.00
IUUC-Ont-071547	Oreochromis niloticus	39.96	4.00e-94	337.00
IUUC-Oan-073045	Ornithorhynchus anatinus	35.98	2.00e-82	299.00
IUUC-Ocu-073812	Oryctolagus cuniculus	38.24	2.00e-89	322.00
IUUC-Oba-075071	Oryza barthii	83.81	0.00e+00	1036.00
IUUC-Obr-076614	Oryza brachyantha	83.11	0.00e+00	1027.00
IUUC-Ogl-076963	Oryza glaberrima	84.08	0.00e+00	977.00
IUUC-Ogu-078436	Oryza glumaepatula	84.08	0.00e+00	977.00
IUUC-Oin-080021	Oryza indica	84.26	0.00e+00	979.00
IUUC-Olo-080298	Oryza longistaminata	84.26	0.00e+00	980.00
IUUC-Ome-081202	Oryza meridionalis	83.97	0.00e+00	1039.00
IUUC-Oni-082604	Oryza nivara	83.97	0.00e+00	1040.00
IUUC-Opu-083763	Oryza punctata	83.81	0.00e+00	1036.00
IUUC-Oru-084243	Oryza rufipogon	83.97	0.00e+00	1040.00
IUUC-Osa-086153	Oryza sativa	84.54	0.00e+00	885.00
IUUC-Ola-086670	Oryzias latipes	36.56	6.00e-92	330.00
IUUC-Oga-088723	Otolemur garnettii	37.15	7.00e-85	307.00
IUUC-Oar-090125	Ovis aries	38.24	5.00e-92	330.00
IUUC-Ptr-090787	Pan troglodytes	38.68	1.00e-88	319.00
IUUC-Pan-092573	Papio anubis	36.72	6.00e-46	177.00
IUUC-Psi-093579	Pelodiscus sinensis	41.20	4.00e-89	320.00
IUUC-Pma-094254	Petromyzon marinus	43.13	3.00e-81	294.00
IUUC-Pno-094912	Phaeosphaeria nodorum	36.21	3.00e-85	308.00
IUUC-Ppa-095289	Physcomitrella patens	51.12	2.00e-160	558.00
IUUC-Pfo-096394	Poecilia formosa	39.96	2.00e-93	335.00
IUUC-Pab-098459	Pongo abelii	38.05	6.00e-90	324.00
IUUC-Pop-099989	Populus trichocarpa	60.93	0.00e+00	705.00
IUUC-Pca-100574	Procavia capensis	43.94	1.00e-42	166.00
IUUC-Ppe-101227	Prunus persica	60.10	0.00e+00	717.00
IUUC-Pva-102404	Pteropus vampyrus	36.47	3.00e-77	281.00
IUUC-Pgr-103411	Puccinia graminis	31.05	2.00e-54	207.00
IUUC-Ptt-103705	Puccinia triticina	26.27	5.00e-35	142.00
IUUC-Pte-104023	Pyrenophora teres	35.50	2.00e-84	305.00
IUUC-Pyt-104759	Pyrenophora triticirepentis	34.81	8.00e-83	301.00
IUUC-Rno-105335	Rattus norvegicus	38.08	6.00e-88	317.00
IUUC-Sce-106152	Saccharomyces cerevisiae	35.00	5.00e-18	85.90
IUUC-Sha-106497	Sarcophilus harrisii	38.45	2.00e-88	318.00
IUUC-Sja-107894	Schizosaccharomyces japonicus	34.71	3.00e-79	288.00
IUUC-Spo-108235	Schizosaccharomyces pombe	33.93	4.00e-81	294.00
IUUC-Smo-109054	Selaginella moellendorffii	54.00	7.00e-173	599.00
IUUC-Sit-110575	Setaria italica	90.65	0.00e+00	1136.00
IUUC-Sly-111167	Solanum lycopersicum	59.17	0.00e+00	645.00
IUUC-Stu-112726	Solanum tuberosum	54.19	0.00e+00	643.00
IUUC-Sar-113539	Sorex araneus	43.93	4.00e-37	148.00
IUUC-Sre-115051	Sporisorium reilianum	29.98	7.00e-46	178.00
IUUC-Ssc-115532	Sus scrofa	38.24	3.00e-92	331.00
IUUC-Tgu-116728	Taeniopygia guttata	38.07	2.00e-91	328.00
IUUC-Tru-118471	Takifugu rubripes	38.77	4.00e-96	344.00
IUUC-Tsy-119284	Tarsius syrichta	32.53	3.00e-69	254.00
IUUC-Tni-119720	Tetraodon nigroviridis	37.45	2.00e-90	325.00
IUUC-Tca-121103	Theobroma cacao	61.10	0.00e+00	733.00
IUUC-Tre-122234	Trichoderma reesei	33.98	1.00e-74	273.00
IUUC-Tvi-122376	Trichoderma virens	32.98	8.00e-52	196.00
IUUC-Tae-125720	Triticum aestivum	79.63	0.00e+00	985.00
IUUC-Tur-126726	Triticum urartu	75.34	0.00e+00	924.00
IUUC-Tme-126972	Tuber melanosporum	38.94	4.00e-102	365.00
IUUC-Ttr-129184	Tursiops truncatus	36.87	5.00e-81	294.00
IUUC-Uma-129354	Ustilago maydis	32.76	8.00e-39	154.00
IUUC-Vda-129770	Verticillium dahliae	33.33	1.00e-70	259.00
IUUC-Vpa-130400	Vicugna pacos	38.68	7.00e-88	317.00
IUUC-Vvi-130991	Vitis vinifera	58.47	0.00e+00	665.00
IUUC-Xtr-132619	Xenopus tropicalis	38.16	8.00e-90	323.00
IUUC-Xma-134128	Xiphophorus maculatus	39.96	1.00e-93	336.00
IUUC-Yli-134521	Yarrowia lipolytica	37.13	1.00e-83	303.00
IUUC-Zma-135772	Zea mays	91.82	0.00e+00	1067.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence