iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-106127

Ensembl Protein ID

ENSRNOP00000064523.2

UniProt Accession

M0R565; M0R565_RAT

Genbank Protein ID

ENSRNOP00000064523

Protein Name

WD repeat domain 82

Genbank Nucleotide ID

AABR07071431

Gene Name

Wdr82

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000048441.3	ENSRNOT00000074771.3	ENSRNOP00000064523.2

Annotation

mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
CPLM	dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-24	83.5	105	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH+ +v +l+    d++++sGs D+ti++WDlr+ ++
   Q: 105  GHSKRVVALSMspVDDTFISGSLDKTIRLWDLRSPNC 141
           799999999999755899**************99876 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MKLTDSVLRS FRVAKVFREN SDKINCFDFS PNGETVISSS DDDSIVLYDC QEGKTPTKTL 60
YSKKMVWNLI RYTHANTVVY SSNKIPDTIR YLSLHDNKYI RYFPGHSKRV VALSMSPVDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGATTTTGCT TCTCCCTTTA AGATGGCGGA CACAATGAGC CGGCGGAGCG CCGGTTGGCC 60
CTGAAGTGAC TCTGGAGAAC GGTCAGCGAG GTCCCGTCAT CCCGGCAAGA GAGCGTTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000785--C:chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005730--C:nucleolus
GO:0072357--C:PTW/PP1 phosphatase complex
GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0042800--F:histone methyltransferase activity (H3-K4 specific)
GO:0080182--P:histone H3-K4 trimethylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	38.85	3.00e-57	215.00
IUUC-Aml-001221	Ailuropoda melanoleuca	97.13	2.00e-175	607.00
IUUC-Atr-002607	Amborella trichopoda	39.62	3.00e-66	245.00
IUUC-Apl-003817	Anas platyrhynchos	94.75	7.00e-167	580.00
IUUC-Aca-005383	Anolis carolinensis	92.04	1.00e-167	581.00
IUUC-Aly-005437	Arabidopsis lyrata	38.66	8.00e-65	240.00
IUUC-Ath-006793	Arabidopsis thaliana	38.66	1.00e-64	239.00
IUUC-Ago-007804	Ashbya gossypii	33.54	1.00e-45	177.00
IUUC-Acl-008217	Aspergillus clavatus	35.96	2.00e-50	192.00
IUUC-Afl-008539	Aspergillus flavus	35.57	2.00e-52	199.00
IUUC-Afu-009105	Aspergillus fumigatus	36.26	6.00e-52	197.00
IUUC-Ani-009474	Aspergillus nidulans	35.52	5.00e-49	188.00
IUUC-Ang-009858	Aspergillus niger	36.73	3.00e-53	202.00
IUUC-Aor-009955	Aspergillus oryzae	35.57	2.00e-52	199.00
IUUC-Ate-010364	Aspergillus terreus	36.55	3.00e-53	202.00
IUUC-Ame-010661	Astyanax mexicanus	89.51	2.00e-160	558.00
IUUC-Bgr-012008	Blumeria graminis	35.16	1.00e-51	196.00
IUUC-Bta-013022	Bos taurus	97.05	1.00e-169	590.00
IUUC-Bci-013966	Botrytis cinerea	35.17	3.00e-46	179.00
IUUC-Bdi-015066	Brachypodium distachyon	41.03	9.00e-70	256.00
IUUC-Bol-016019	Brassica oleracea	39.30	1.00e-65	243.00
IUUC-Bra-017871	Brassica rapa	39.30	3.00e-65	241.00
IUUC-Cel-018276	Caenorhabditis elegans	41.85	9.00e-68	250.00
IUUC-Cja-019309	Callithrix jacchus	97.13	2.00e-175	607.00
IUUC-Cfa-020345	Canis familiaris	97.13	2.00e-175	607.00
IUUC-Cpo-022227	Cavia porcellus	89.56	5.00e-156	543.00
IUUC-Csa-023267	Chlorocebus sabaeus	91.72	6.00e-170	589.00
IUUC-Cho-024409	Choloepus hoffmanni	86.82	1.00e-137	482.00
IUUC-Cin-025628	Ciona intestinalis	66.98	2.00e-130	458.00
IUUC-Csv-026164	Ciona savignyi	66.88	3.00e-130	457.00
IUUC-Cgl-026516	Colletotrichum gloeosporioides	34.46	3.00e-46	179.00
IUUC-Cne-026890	Cryptococcus neoformans	26.75	3.00e-32	132.00
IUUC-Cme-027288	Cyanidioschyzon merolae	37.80	1.00e-61	230.00
IUUC-Dre-028001	Danio rerio	90.76	3.00e-166	577.00
IUUC-Dno-029056	Dasypus novemcinctus	97.13	2.00e-175	607.00
IUUC-Dor-031078	Dipodomys ordii	100.00	4.00e-121	426.00
IUUC-Dse-031152	Dothistroma septosporum	36.54	8.00e-53	200.00
IUUC-Dme-032085	Drosophila melanogaster	67.20	3.00e-133	468.00
IUUC-Ete-033158	Echinops telfairi	93.31	6.00e-170	589.00
IUUC-Eca-033879	Equus caballus	96.80	3.00e-143	502.00
IUUC-Eeu-035229	Erinaceus europaeus	85.90	8.00e-145	506.00
IUUC-Fca-035896	Felis catus	97.13	2.00e-175	607.00
IUUC-Fal-036843	Ficedula albicollis	94.75	8.00e-167	580.00
IUUC-Fox-037858	Fusarium oxysporum	36.13	2.00e-51	196.00
IUUC-Fso-038386	Fusarium solani	34.88	8.00e-43	167.00
IUUC-Gmo-038506	Gadus morhua	89.22	5.00e-159	554.00
IUUC-Ggr-040090	Gaeumannomyces graminis	37.46	1.00e-51	196.00
IUUC-Gga-040192	Gallus gallus	94.90	3.00e-172	597.00
IUUC-Gac-042494	Gasterosteus aculeatus	87.62	2.00e-155	542.00
IUUC-Gma-042835	Glycine max	40.95	3.00e-65	241.00
IUUC-Ggo-045204	Gorilla gorilla	97.05	3.00e-170	592.00
IUUC-Hsa-045866	Homo sapiens	97.13	2.00e-175	607.00
IUUC-Hvu-047731	Hordeum vulgare	41.15	4.00e-57	214.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	97.13	2.00e-175	607.00
IUUC-Kpa-049249	Komagataella pastoris	36.11	2.00e-52	199.00
IUUC-Lch-050431	Latimeria chalumnae	91.91	5.00e-165	574.00
IUUC-Lpe-050830	Leersia perrieri	41.03	4.00e-69	254.00
IUUC-Loc-052505	Lepisosteus oculatus	86.52	5.00e-33	132.00
IUUC-Lma-053026	Leptosphaeria maculans	34.86	1.00e-53	203.00
IUUC-Laf-054265	Loxodonta africana	75.57	2.00e-121	428.00
IUUC-Mcc-055583	Macaca mulatta	97.13	2.00e-175	607.00
IUUC-Meu-056113	Macropus eugenii	82.48	6.00e-141	493.00
IUUC-Mor-057267	Magnaporthe oryzae	34.68	3.00e-45	175.00
IUUC-Mpo-057502	Magnaporthe poae	37.17	2.00e-50	192.00
IUUC-Mtr-058607	Medicago truncatula	40.63	5.00e-65	241.00
IUUC-Mla-058815	Melampsora laricipopulina	38.89	5.00e-65	241.00
IUUC-Mga-059407	Meleagris gallopavo	94.59	9.00e-146	508.00
IUUC-Mvi-060411	Microbotryum violaceum	36.36	4.00e-59	222.00
IUUC-Mmr-061470	Microcebus murinus	97.13	2.00e-175	607.00
IUUC-Mdo-062860	Monodelphis domestica	94.90	9.00e-172	595.00
IUUC-Mmu-063105	Mus musculus	97.13	2.00e-175	607.00
IUUC-Mac-065314	Musa acuminata	40.26	4.00e-66	244.00
IUUC-Mpu-066472	Mustela putorius furo	96.91	1.00e-148	518.00
IUUC-Mlu-067073	Myotis lucifugus	97.08	8.00e-172	595.00
IUUC-Nfi-068284	Neosartorya fischeri	36.26	4.00e-52	198.00
IUUC-Ncr-068702	Neurospora crassa	33.53	2.00e-40	160.00
IUUC-Nle-069451	Nomascus leucogenys	97.13	2.00e-175	607.00
IUUC-Opr-071112	Ochotona princeps	96.91	1.00e-148	518.00
IUUC-Ont-071988	Oreochromis niloticus	88.85	3.00e-159	555.00
IUUC-Oan-072947	Ornithorhynchus anatinus	94.59	7.00e-146	509.00
IUUC-Ocu-074969	Oryctolagus cuniculus	97.13	2.00e-175	607.00
IUUC-Oba-075229	Oryza barthii	36.62	1.00e-51	196.00
IUUC-Obr-076456	Oryza brachyantha	41.35	1.00e-69	256.00
IUUC-Ogl-076973	Oryza glaberrima	41.35	7.00e-70	257.00
IUUC-Ogu-078068	Oryza glumaepatula	36.31	1.00e-51	196.00
IUUC-Oin-079656	Oryza indica	41.35	8.00e-70	256.00
IUUC-Olo-080893	Oryza longistaminata	35.90	1.00e-50	192.00
IUUC-Ome-081559	Oryza meridionalis	35.42	2.00e-30	125.00
IUUC-Oni-082990	Oryza nivara	36.31	3.00e-51	196.00
IUUC-Opu-083374	Oryza punctata	36.94	9.00e-52	197.00
IUUC-Oru-084354	Oryza rufipogon	36.31	3.00e-51	196.00
IUUC-Osa-086296	Oryza sativa	41.35	8.00e-70	256.00
IUUC-Ola-087095	Oryzias latipes	89.49	5.00e-165	573.00
IUUC-Olu-087603	Ostreococcus lucimarinus	35.37	3.00e-50	191.00
IUUC-Oga-088766	Otolemur garnettii	97.13	2.00e-175	607.00
IUUC-Oar-089565	Ovis aries	94.90	2.00e-170	590.00
IUUC-Ptr-091219	Pan troglodytes	89.81	2.00e-166	578.00
IUUC-Pan-091733	Papio anubis	97.13	2.00e-175	607.00
IUUC-Psi-092972	Pelodiscus sinensis	94.44	8.00e-166	577.00
IUUC-Pma-094332	Petromyzon marinus	83.76	1.00e-160	558.00
IUUC-Pno-094960	Phaeosphaeria nodorum	37.85	6.00e-56	211.00
IUUC-Ppa-095292	Physcomitrella patens	44.41	1.00e-76	279.00
IUUC-Pfo-096775	Poecilia formosa	88.52	1.00e-158	553.00
IUUC-Pab-097721	Pongo abelii	94.90	6.00e-168	583.00
IUUC-Pop-098907	Populus trichocarpa	40.58	5.00e-66	244.00
IUUC-Pca-100635	Procavia capensis	95.74	2.00e-146	511.00
IUUC-Ppe-101452	Prunus persica	41.27	6.00e-67	247.00
IUUC-Pva-102798	Pteropus vampyrus	96.50	4.00e-174	603.00
IUUC-Pgr-103395	Puccinia graminis	38.10	8.00e-66	244.00
IUUC-Ptt-103747	Puccinia triticina	36.72	4.00e-62	232.00
IUUC-Pte-104129	Pyrenophora teres	36.88	1.00e-50	194.00
IUUC-Pyt-104773	Pyrenophora triticirepentis	34.19	7.00e-53	201.00
IUUC-Sce-106257	Saccharomyces cerevisiae	33.02	3.00e-40	159.00
IUUC-Sha-106573	Sarcophilus harrisii	83.92	1.00e-153	535.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	35.26	1.00e-42	166.00
IUUC-Spo-108206	Schizosaccharomyces pombe	33.94	2.00e-45	176.00
IUUC-Smo-108979	Selaginella moellendorffii	43.45	1.00e-74	272.00
IUUC-Sit-109858	Setaria italica	41.21	3.00e-69	254.00
IUUC-Sly-111267	Solanum lycopersicum	41.53	8.00e-67	247.00
IUUC-Sar-113079	Sorex araneus	96.91	1.00e-148	518.00
IUUC-Sbi-114094	Sorghum bicolor	36.94	1.00e-54	206.00
IUUC-Sre-115157	Sporisorium reilianum	33.52	1.00e-48	186.00
IUUC-Ssc-116386	Sus scrofa	97.13	2.00e-175	607.00
IUUC-Tgu-116465	Taeniopygia guttata	94.02	4.00e-139	488.00
IUUC-Tru-117604	Takifugu rubripes	88.52	6.00e-159	554.00
IUUC-Tsy-119314	Tarsius syrichta	73.60	9.00e-101	359.00
IUUC-Tni-120237	Tetraodon nigroviridis	87.83	1.00e-158	553.00
IUUC-Tca-121853	Theobroma cacao	40.58	3.00e-66	245.00
IUUC-Tre-122205	Trichoderma reesei	34.67	1.00e-48	187.00
IUUC-Tvi-122471	Trichoderma virens	30.95	2.00e-35	142.00
IUUC-Tae-124944	Triticum aestivum	41.35	9.00e-71	259.00
IUUC-Tur-126512	Triticum urartu	41.67	3.00e-54	205.00
IUUC-Tme-126883	Tuber melanosporum	39.94	6.00e-57	214.00
IUUC-Tbe-127310	Tupaia belangeri	93.18	1.00e-70	259.00
IUUC-Ttr-128307	Tursiops truncatus	96.91	1.00e-148	518.00
IUUC-Uma-129579	Ustilago maydis	34.11	9.00e-49	187.00
IUUC-Vda-129826	Verticillium dahliae	34.29	5.00e-46	178.00
IUUC-Vpa-130091	Vicugna pacos	96.91	1.00e-148	518.00
IUUC-Vvi-131040	Vitis vinifera	40.58	3.00e-65	242.00
IUUC-Xtr-132660	Xenopus tropicalis	91.64	6.00e-164	570.00
IUUC-Xma-133496	Xiphophorus maculatus	88.85	3.00e-164	570.00
IUUC-Yli-134509	Yarrowia lipolytica	37.27	1.00e-56	213.00
IUUC-Zma-134685	Zea mays	41.03	5.00e-69	254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence