iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-062065

Ensembl Protein ID

ENSMODP00000026272.3

UniProt Accession

F6RJB6; F6RJB6_MONDO

Protein Name

Uncharacterized protein

Gene Name

CHAF1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000021005.3	ENSMODT00000026739.3	ENSMODP00000026272.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-20	71.5	127	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+++++ +d +l++s+s D+t  +WD+ +g 
   Q: 127  GHLEDVYDICWmTDgNLMASASVDNTAIIWDVAKGQ 162
           89**********999****************98886 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MKVITCEIAW HNKEPVYSLD FQHGPDGKIH RLASSGVDTA VRIWKVEKGP DGKAIVEFLS 60
NLARHTKAVN VVRFSPNGEI LASGGDDAAI LLWKVNDNKE PEQIAFQDED EAQLNKENWA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACCTGCGA CCAGGACTTG CGCTTCTAAA GGACAATGAA GGTGATTACT TGCGAGATAG 60
CCTGGCACAA CAAAGAGCCA GTGTACAGCC TGGACTTCCA GCACGGGCCT GACGGCAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029129--CAF1_p60_C
IPR001632--Gprotein_B
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF15512--CAF-1_p60_C
PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005829--C:cytosol
GO:0000790--C:nuclear chromatin
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0042393--F:histone binding
GO:0006335--P:DNA replication-dependent nucleosome assembly
GO:0006334--P:nucleosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	40.65	4.00e-82	298.00
IUUC-Aml-001755	Ailuropoda melanoleuca	76.77	0.00e+00	854.00
IUUC-Atr-002674	Amborella trichopoda	40.05	6.00e-86	311.00
IUUC-Apl-003701	Anas platyrhynchos	73.03	0.00e+00	822.00
IUUC-Aca-004692	Anolis carolinensis	75.09	0.00e+00	799.00
IUUC-Aly-006286	Arabidopsis lyrata	40.90	7.00e-85	307.00
IUUC-Ath-007683	Arabidopsis thaliana	40.38	5.00e-84	304.00
IUUC-Ago-007940	Ashbya gossypii	34.99	4.00e-63	235.00
IUUC-Acl-008070	Aspergillus clavatus	44.65	2.00e-44	174.00
IUUC-Afl-008414	Aspergillus flavus	42.52	2.00e-43	171.00
IUUC-Afu-009046	Aspergillus fumigatus	47.25	9.00e-21	95.10
IUUC-Ani-009399	Aspergillus nidulans	45.12	7.00e-44	172.00
IUUC-Ang-009650	Aspergillus niger	41.70	2.00e-41	164.00
IUUC-Aor-009937	Aspergillus oryzae	42.52	2.00e-43	171.00
IUUC-Ate-010505	Aspergillus terreus	36.45	4.00e-28	119.00
IUUC-Ame-011094	Astyanax mexicanus	64.41	0.00e+00	666.00
IUUC-Bgr-012005	Blumeria graminis	40.65	2.00e-38	154.00
IUUC-Bta-013423	Bos taurus	77.41	0.00e+00	852.00
IUUC-Bci-013847	Botrytis cinerea	39.34	7.00e-39	155.00
IUUC-Bdi-014860	Brachypodium distachyon	40.93	7.00e-82	297.00
IUUC-Bol-016603	Brassica oleracea	39.51	9.00e-81	294.00
IUUC-Bra-017175	Brassica rapa	40.20	2.00e-78	286.00
IUUC-Cel-018272	Caenorhabditis elegans	34.89	2.00e-56	213.00
IUUC-Cja-019558	Callithrix jacchus	77.82	0.00e+00	847.00
IUUC-Cfa-020900	Canis familiaris	75.26	0.00e+00	835.00
IUUC-Cpo-022054	Cavia porcellus	72.91	0.00e+00	766.00
IUUC-Csa-023850	Chlorocebus sabaeus	80.07	0.00e+00	874.00
IUUC-Cho-024510	Choloepus hoffmanni	83.39	4.00e-143	501.00
IUUC-Cin-025178	Ciona intestinalis	46.60	2.00e-107	382.00
IUUC-Cgl-026572	Colletotrichum gloeosporioides	43.93	3.00e-36	146.00
IUUC-Cne-027015	Cryptococcus neoformans	36.00	1.00e-36	148.00
IUUC-Cme-027136	Cyanidioschyzon merolae	32.98	8.00e-62	231.00
IUUC-Dre-027879	Danio rerio	66.00	0.00e+00	677.00
IUUC-Dno-029335	Dasypus novemcinctus	78.94	0.00e+00	881.00
IUUC-Dor-030520	Dipodomys ordii	62.95	0.00e+00	643.00
IUUC-Dse-031566	Dothistroma septosporum	41.82	1.00e-42	168.00
IUUC-Dme-031838	Drosophila melanogaster	47.72	2.00e-108	387.00
IUUC-Eca-033563	Equus caballus	78.55	0.00e+00	898.00
IUUC-Fca-036052	Felis catus	76.47	0.00e+00	844.00
IUUC-Fal-037080	Ficedula albicollis	71.43	0.00e+00	803.00
IUUC-Fox-038022	Fusarium oxysporum	42.72	5.00e-41	162.00
IUUC-Fso-038115	Fusarium solani	43.19	4.00e-40	159.00
IUUC-Gmo-039461	Gadus morhua	72.35	6.00e-137	479.00
IUUC-Ggr-040100	Gaeumannomyces graminis	43.13	3.00e-42	166.00
IUUC-Gga-041133	Gallus gallus	73.91	0.00e+00	819.00
IUUC-Gac-041769	Gasterosteus aculeatus	64.43	0.00e+00	662.00
IUUC-Gma-043070	Glycine max	39.39	1.00e-92	333.00
IUUC-Ggo-044561	Gorilla gorilla	79.26	0.00e+00	863.00
IUUC-Hsa-046150	Homo sapiens	79.54	0.00e+00	872.00
IUUC-Hvu-047792	Hordeum vulgare	40.00	1.00e-51	196.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	80.46	0.00e+00	829.00
IUUC-Kpa-049397	Komagataella pastoris	38.44	3.00e-79	288.00
IUUC-Lch-050365	Latimeria chalumnae	55.49	2.00e-145	508.00
IUUC-Lpe-050875	Leersia perrieri	40.90	2.00e-82	299.00
IUUC-Loc-052770	Lepisosteus oculatus	69.90	0.00e+00	700.00
IUUC-Lma-053291	Leptosphaeria maculans	41.10	2.00e-41	164.00
IUUC-Laf-053505	Loxodonta africana	79.47	0.00e+00	916.00
IUUC-Mcc-054803	Macaca mulatta	80.07	0.00e+00	874.00
IUUC-Meu-056578	Macropus eugenii	77.42	0.00e+00	870.00
IUUC-Mor-057211	Magnaporthe oryzae	41.51	8.00e-40	158.00
IUUC-Mpo-057411	Magnaporthe poae	42.65	2.00e-41	164.00
IUUC-Mtr-058066	Medicago truncatula	41.90	6.00e-92	331.00
IUUC-Mga-059735	Meleagris gallopavo	74.78	0.00e+00	847.00
IUUC-Mvi-060288	Microbotryum violaceum	30.22	4.00e-31	130.00
IUUC-Mmr-061343	Microcebus murinus	81.01	0.00e+00	904.00
IUUC-Mmu-063501	Mus musculus	78.31	0.00e+00	831.00
IUUC-Mac-064864	Musa acuminata	40.39	5.00e-83	301.00
IUUC-Mpu-066549	Mustela putorius furo	75.67	0.00e+00	845.00
IUUC-Mlu-067121	Myotis lucifugus	73.69	0.00e+00	803.00
IUUC-Nfi-068462	Neosartorya fischeri	45.12	9.00e-45	175.00
IUUC-Ncr-068838	Neurospora crassa	40.29	1.00e-39	158.00
IUUC-Nle-069854	Nomascus leucogenys	79.89	0.00e+00	871.00
IUUC-Opr-070803	Ochotona princeps	72.42	0.00e+00	788.00
IUUC-Ont-071642	Oreochromis niloticus	65.41	0.00e+00	664.00
IUUC-Oan-073675	Ornithorhynchus anatinus	77.44	0.00e+00	855.00
IUUC-Ocu-073863	Oryctolagus cuniculus	91.19	0.00e+00	748.00
IUUC-Oba-075682	Oryza barthii	40.35	8.00e-78	284.00
IUUC-Obr-076039	Oryza brachyantha	41.90	4.00e-84	305.00
IUUC-Ogu-078021	Oryza glumaepatula	41.34	6.00e-83	301.00
IUUC-Oin-079908	Oryza indica	35.84	2.00e-63	236.00
IUUC-Olo-081063	Oryza longistaminata	41.34	4.00e-83	301.00
IUUC-Ome-081930	Oryza meridionalis	41.34	6.00e-83	301.00
IUUC-Oni-082547	Oryza nivara	41.34	5.00e-83	301.00
IUUC-Opu-084089	Oryza punctata	40.84	2.00e-80	293.00
IUUC-Oru-084844	Oryza rufipogon	41.34	6.00e-83	301.00
IUUC-Osa-085582	Oryza sativa	41.34	6.00e-83	301.00
IUUC-Ola-087187	Oryzias latipes	59.86	0.00e+00	674.00
IUUC-Olu-087792	Ostreococcus lucimarinus	38.92	1.00e-75	276.00
IUUC-Oga-088390	Otolemur garnettii	79.02	0.00e+00	889.00
IUUC-Oar-089740	Ovis aries	75.00	0.00e+00	821.00
IUUC-Ptr-091581	Pan troglodytes	80.54	0.00e+00	873.00
IUUC-Pan-092258	Papio anubis	74.33	0.00e+00	785.00
IUUC-Psi-093761	Pelodiscus sinensis	75.57	0.00e+00	862.00
IUUC-Ppa-095428	Physcomitrella patens	41.65	6.00e-92	331.00
IUUC-Pfo-097357	Poecilia formosa	64.27	0.00e+00	660.00
IUUC-Pab-098520	Pongo abelii	79.72	0.00e+00	874.00
IUUC-Pop-099331	Populus trichocarpa	40.45	9.00e-85	307.00
IUUC-Ppe-101548	Prunus persica	40.45	3.00e-85	309.00
IUUC-Pva-103243	Pteropus vampyrus	77.37	0.00e+00	788.00
IUUC-Pgr-103591	Puccinia graminis	33.71	4.00e-36	146.00
IUUC-Pte-104247	Pyrenophora teres	41.51	2.00e-41	164.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	41.51	2.00e-41	164.00
IUUC-Rno-105202	Rattus norvegicus	78.31	0.00e+00	828.00
IUUC-Sce-106250	Saccharomyces cerevisiae	34.53	5.00e-71	261.00
IUUC-Sha-107036	Sarcophilus harrisii	89.14	0.00e+00	1060.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	36.58	4.00e-75	275.00
IUUC-Spo-108050	Schizosaccharomyces pombe	34.18	4.00e-71	262.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	37.45	3.00e-39	156.00
IUUC-Sit-109838	Setaria italica	41.98	2.00e-84	306.00
IUUC-Sly-110872	Solanum lycopersicum	39.35	1.00e-82	300.00
IUUC-Stu-111933	Solanum tuberosum	39.11	9.00e-80	290.00
IUUC-Sbi-114587	Sorghum bicolor	41.19	5.00e-84	305.00
IUUC-Ssc-115462	Sus scrofa	80.00	0.00e+00	877.00
IUUC-Tgu-117186	Taeniopygia guttata	72.57	0.00e+00	784.00
IUUC-Tru-118310	Takifugu rubripes	65.15	0.00e+00	671.00
IUUC-Tsy-118927	Tarsius syrichta	71.58	0.00e+00	627.00
IUUC-Tni-120832	Tetraodon nigroviridis	58.29	0.00e+00	648.00
IUUC-Tca-121584	Theobroma cacao	42.54	5.00e-87	315.00
IUUC-Tre-122140	Trichoderma reesei	41.12	4.00e-40	159.00
IUUC-Tvi-122663	Trichoderma virens	42.52	2.00e-40	160.00
IUUC-Tae-124063	Triticum aestivum	40.65	5.00e-82	298.00
IUUC-Tur-126239	Triticum urartu	40.65	3.00e-82	299.00
IUUC-Tme-127108	Tuber melanosporum	39.76	1.00e-79	290.00
IUUC-Ttr-129010	Tursiops truncatus	78.75	0.00e+00	866.00
IUUC-Vda-129825	Verticillium dahliae	40.57	3.00e-40	159.00
IUUC-Vpa-130374	Vicugna pacos	79.19	1.00e-101	363.00
IUUC-Vvi-131136	Vitis vinifera	39.70	3.00e-83	302.00
IUUC-Xtr-132141	Xenopus tropicalis	71.01	0.00e+00	712.00
IUUC-Xma-133980	Xiphophorus maculatus	74.44	0.00e+00	658.00
IUUC-Yli-134457	Yarrowia lipolytica	39.73	2.00e-37	150.00
IUUC-Zma-135321	Zea mays	42.29	3.00e-85	309.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence