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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007642
UUCD1 version UUC-ArT-00220
Ensembl Protein ID AT4G18905.2
UniProt Accession F4JSC0; F4JSC0_ARATH
Genbank Protein ID AEE84105.1
Protein Name Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID CP002687
Gene Name At4g18905
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G18905 AT4G18905.2 AT4G18905.2
AT4G18905 AT4G18905.1 AT4G18905.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.20e-28 96.2 274 311
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgvll 36
           Ht+sv +la+      ++l+s+s D+++kvWD+ tg++ 
   Q: 274  HTESVLGLAWnkefR-NILASASADKKVKVWDVATGTCK 311
           9*********95543.89******************996 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MITAVSWIPK GNLKAVPDVA EPPSKEELKE LIESGAFARN VEGSNEDEEE EIEEDGEEIS 60
EVDHAKAVAE ALGKSSKSKA VSSSMEVDEV SQGLKELDMD NYDEEDDEIE LFSSGMGDLY 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007642|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCTATACTCA CTCTCGGCAA AAAAAAAGTT CCTCAGAAGC AAACAAATCT TCAATTGTTA 60
AACCCTAAAC CTACAAAAGT CTTGACTTTG TTTGTTGCTC ATCTTCGTTC TTCTCTCTCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007642|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005634--C:nucleus
KEGG ath:AT4G18905
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000884 Aegilops tauschii 51.23 3.00e-105 374.00
IUUC-Atr-002719 Amborella trichopoda 52.78 3.00e-113 400.00
IUUC-Aly-005967 Arabidopsis lyrata 90.48 0.00e+00 815.00
IUUC-Ago-007922 Ashbya gossypii 30.68 4.00e-44 172.00
IUUC-Acl-008064 Aspergillus clavatus 38.63 2.00e-72 265.00
IUUC-Afl-008590 Aspergillus flavus 38.94 6.00e-71 261.00
IUUC-Afu-009081 Aspergillus fumigatus 39.01 5.00e-74 271.00
IUUC-Ani-009187 Aspergillus nidulans 37.53 2.00e-70 259.00
IUUC-Aor-010018 Aspergillus oryzae 38.94 4.00e-71 261.00
IUUC-Ate-010542 Aspergillus terreus 41.08 9.00e-53 200.00
IUUC-Ame-011810 Astyanax mexicanus 33.84 5.00e-55 207.00
IUUC-Bgr-012023 Blumeria graminis 34.56 4.00e-69 254.00
IUUC-Bci-013981 Botrytis cinerea 40.00 5.00e-72 264.00
IUUC-Bdi-014598 Brachypodium distachyon 49.90 4.00e-125 441.00
IUUC-Bol-016451 Brassica oleracea 80.12 0.00e+00 747.00
IUUC-Bra-017210 Brassica rapa 80.43 0.00e+00 754.00
IUUC-Cre-022807 Chlamydomonas reinhardtii 42.13 5.00e-90 324.00
IUUC-Cin-025441 Ciona intestinalis 31.28 2.00e-41 163.00
IUUC-Cgl-026678 Colletotrichum gloeosporioides 38.44 1.00e-72 266.00
IUUC-Cne-026879 Cryptococcus neoformans 31.84 1.00e-46 180.00
IUUC-Cme-027322 Cyanidioschyzon merolae 26.13 9.00e-20 90.90
IUUC-Dre-027584 Danio rerio 35.35 8.00e-58 217.00
IUUC-Dse-031449 Dothistroma septosporum 34.94 1.00e-75 276.00
IUUC-Dme-032070 Drosophila melanogaster 28.40 1.00e-41 163.00
IUUC-Fal-036704 Ficedula albicollis 34.73 6.00e-56 210.00
IUUC-Fso-038104 Fusarium solani 42.00 8.00e-73 267.00
IUUC-Gmo-038715 Gadus morhua 35.32 2.00e-60 226.00
IUUC-Ggr-040060 Gaeumannomyces graminis 40.31 3.00e-71 262.00
IUUC-Gga-040402 Gallus gallus 32.04 1.00e-59 223.00
IUUC-Gma-044254 Glycine max 58.38 2.00e-140 491.00
IUUC-Kpa-049194 Komagataella pastoris 29.01 2.00e-50 193.00
IUUC-Lch-049524 Latimeria chalumnae 30.83 3.00e-49 188.00
IUUC-Lpe-050918 Leersia perrieri 51.89 3.00e-124 437.00
IUUC-Loc-051947 Lepisosteus oculatus 33.73 3.00e-61 228.00
IUUC-Lma-053310 Leptosphaeria maculans 38.39 2.00e-69 256.00
IUUC-Meu-056892 Macropus eugenii 31.83 2.00e-37 149.00
IUUC-Mor-057110 Magnaporthe oryzae 40.26 6.00e-71 261.00
IUUC-Mpo-057610 Magnaporthe poae 38.89 9.00e-42 163.00
IUUC-Mtr-058677 Medicago truncatula 57.79 7.00e-156 543.00
IUUC-Mla-059056 Melampsora laricipopulina 35.45 1.00e-55 210.00
IUUC-Mvi-060307 Microbotryum violaceum 37.33 1.00e-66 246.00
IUUC-Mac-064937 Musa acuminata 56.61 1.00e-141 495.00
IUUC-Nfi-068446 Neosartorya fischeri 39.27 6.00e-73 267.00
IUUC-Ncr-068630 Neurospora crassa 40.05 4.00e-70 258.00
IUUC-Ont-071946 Oreochromis niloticus 35.63 2.00e-59 223.00
IUUC-Oba-075486 Oryza barthii 49.80 4.00e-121 427.00
IUUC-Obr-076759 Oryza brachyantha 53.78 8.00e-128 449.00
IUUC-Ogu-078324 Oryza glumaepatula 51.23 3.00e-103 368.00
IUUC-Oin-079455 Oryza indica 58.33 3.00e-129 454.00
IUUC-Olo-080518 Oryza longistaminata 54.66 1.00e-114 405.00
IUUC-Ome-081585 Oryza meridionalis 52.94 3.00e-107 381.00
IUUC-Oni-082084 Oryza nivara 56.62 4.00e-121 427.00
IUUC-Opu-084114 Oryza punctata 51.70 4.00e-126 444.00
IUUC-Oru-084211 Oryza rufipogon 56.62 4.00e-121 427.00
IUUC-Osa-085974 Oryza sativa 58.33 3.00e-129 454.00
IUUC-Ola-087544 Oryzias latipes 31.55 8.00e-58 217.00
IUUC-Olu-087732 Ostreococcus lucimarinus 42.82 4.00e-76 278.00
IUUC-Psi-093753 Pelodiscus sinensis 35.04 2.00e-58 219.00
IUUC-Pno-095033 Phaeosphaeria nodorum 36.63 5.00e-68 251.00
IUUC-Ppa-095650 Physcomitrella patens 52.62 5.00e-116 410.00
IUUC-Pfo-097516 Poecilia formosa 36.71 1.00e-62 233.00
IUUC-Pop-099606 Populus trichocarpa 60.95 6.00e-161 559.00
IUUC-Ppe-101910 Prunus persica 61.83 1.00e-163 568.00
IUUC-Pgr-103382 Puccinia graminis 32.59 7.00e-54 204.00
IUUC-Pte-104400 Pyrenophora teres 37.59 3.00e-69 255.00
IUUC-Pyt-104707 Pyrenophora triticirepentis 37.35 1.00e-68 253.00
IUUC-Sce-106279 Saccharomyces cerevisiae 31.29 3.00e-48 185.00
IUUC-Sha-106556 Sarcophilus harrisii 34.53 4.00e-56 211.00
IUUC-Sja-107920 Schizosaccharomyces japonicus 36.43 6.00e-58 217.00
IUUC-Spo-108023 Schizosaccharomyces pombe 37.12 1.00e-65 243.00
IUUC-Ssl-108635 Sclerotinia sclerotiorum 39.70 7.00e-70 257.00
IUUC-Sit-110604 Setaria italica 51.19 8.00e-129 453.00
IUUC-Sly-111400 Solanum lycopersicum 56.49 6.00e-139 486.00
IUUC-Stu-112208 Solanum tuberosum 66.96 2.00e-87 315.00
IUUC-Sbi-114069 Sorghum bicolor 50.59 2.00e-129 454.00
IUUC-Sre-115034 Sporisorium reilianum 35.24 1.00e-57 216.00
IUUC-Tgu-117052 Taeniopygia guttata 33.01 5.00e-49 187.00
IUUC-Tru-118113 Takifugu rubripes 36.01 2.00e-62 232.00
IUUC-Tca-121431 Theobroma cacao 61.95 2.00e-168 584.00
IUUC-Tre-122165 Trichoderma reesei 40.20 1.00e-73 270.00
IUUC-Tvi-122282 Trichoderma virens 40.36 3.00e-74 271.00
IUUC-Tae-125103 Triticum aestivum 54.81 3.00e-115 407.00
IUUC-Tur-126252 Triticum urartu 50.12 2.00e-103 369.00
IUUC-Tme-127183 Tuber melanosporum 38.13 2.00e-63 236.00
IUUC-Uma-129566 Ustilago maydis 35.96 8.00e-59 221.00
IUUC-Vda-129705 Verticillium dahliae 40.15 4.00e-72 265.00
IUUC-Vvi-131241 Vitis vinifera 64.51 1.00e-143 502.00
IUUC-Xtr-132170 Xenopus tropicalis 36.17 1.00e-64 239.00
IUUC-Yli-134585 Yarrowia lipolytica 35.31 3.00e-52 198.00
IUUC-Zma-135830 Zea mays 50.89 7.00e-131 459.00
Created Date 25-Jun-2017

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