iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121404

Ensembl Protein ID

EOY23660

UniProt Accession

A0A061G1H4; A0A061G1H4_THECC

Genbank Protein ID

EOY23660.1

Protein Name

Ubiquitin supergroup,Ribosomal protein L40e

Genbank Nucleotide ID

CM001881

Gene Name

TCM_015479

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_015479	EOY23660	EOY23660

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.80e-41	140.6	24	99
ULD/UDP/UBQ/UBQ_PIM	6.70e-28	97.4	24	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 24   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 99
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 24   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 96
           99********************************************************************986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MMRVKEERER ERERDRSRSR VRKMQIFVKT LTGKTITLEV ESSDTIDNVK AKIQDKEGIP 60
PDQQRLIFAG KQLEDGRTLA DYNIQKESTL HLVLRLRGGI IEPSLMALAR KYNQDKMICR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGACGACGA CGGCGACGAC AGCAACCGAA TATGATCCGA AAACGTCGAT CTAGTCCTTT 60
TCGACAATAT TGAACCGAGA TCCAGCCAGA TCTGACACTC AAAGGCCAGA TCTCGTTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR001975--Ribosomal_L40e
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01377--Ribosomal_L40e
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001006	Aegilops tauschii	61.59	2.00e-47	180.00
IUUC-Aml-001246	Ailuropoda melanoleuca	92.19	5.00e-67	244.00
IUUC-Atr-003081	Amborella trichopoda	79.84	2.00e-50	189.00
IUUC-Apl-004069	Anas platyrhynchos	91.57	2.00e-41	159.00
IUUC-Ath-007098	Arabidopsis thaliana	99.22	1.00e-72	263.00
IUUC-Ago-007932	Ashbya gossypii	90.62	6.00e-66	241.00
IUUC-Acl-008350	Aspergillus clavatus	84.96	3.00e-62	229.00
IUUC-Afl-008554	Aspergillus flavus	91.41	3.00e-66	243.00
IUUC-Afu-008984	Aspergillus fumigatus	91.41	1.00e-65	240.00
IUUC-Ang-009609	Aspergillus niger	90.62	2.00e-65	239.00
IUUC-Aor-009991	Aspergillus oryzae	89.76	3.00e-64	235.00
IUUC-Ate-010252	Aspergillus terreus	91.20	2.00e-64	238.00
IUUC-Ame-010785	Astyanax mexicanus	89.47	5.00e-48	181.00
IUUC-Bgr-012115	Blumeria graminis	90.40	1.00e-63	234.00
IUUC-Bta-013360	Bos taurus	92.19	5.00e-67	244.00
IUUC-Bci-013851	Botrytis cinerea	91.41	2.00e-66	243.00
IUUC-Bdi-014499	Brachypodium distachyon	98.44	3.00e-72	262.00
IUUC-Bol-015961	Brassica oleracea	100.00	2.00e-73	266.00
IUUC-Cel-018677	Caenorhabditis elegans	89.06	2.00e-63	233.00
IUUC-Cja-019572	Callithrix jacchus	92.19	5.00e-67	244.00
IUUC-Cfa-020339	Canis familiaris	92.19	5.00e-67	244.00
IUUC-Cpo-021534	Cavia porcellus	92.19	5.00e-67	244.00
IUUC-Cre-022567	Chlamydomonas reinhardtii	94.53	2.00e-69	252.00
IUUC-Csa-023398	Chlorocebus sabaeus	92.19	5.00e-67	244.00
IUUC-Cin-025266	Ciona intestinalis	89.06	8.00e-65	237.00
IUUC-Csv-026105	Ciona savignyi	88.98	9.00e-65	237.00
IUUC-Cgl-026502	Colletotrichum gloeosporioides	91.20	2.00e-63	236.00
IUUC-Cne-026913	Cryptococcus neoformans	89.06	9.00e-65	237.00
IUUC-Cme-027344	Cyanidioschyzon merolae	92.22	5.00e-45	172.00
IUUC-Dre-028761	Danio rerio	91.41	2.00e-66	243.00
IUUC-Dno-028899	Dasypus novemcinctus	92.19	6.00e-67	244.00
IUUC-Dme-031588	Drosophila melanogaster	91.41	3.00e-66	242.00
IUUC-Ete-033120	Echinops telfairi	92.19	5.00e-67	244.00
IUUC-Eca-033787	Equus caballus	92.19	5.00e-67	244.00
IUUC-Eeu-035081	Erinaceus europaeus	94.29	2.00e-33	132.00
IUUC-Fca-035725	Felis catus	92.19	5.00e-67	244.00
IUUC-Fox-037870	Fusarium oxysporum	91.41	2.00e-66	243.00
IUUC-Fso-038461	Fusarium solani	97.47	1.00e-41	159.00
IUUC-Gmo-039163	Gadus morhua	92.19	7.00e-67	244.00
IUUC-Ggr-040034	Gaeumannomyces graminis	91.41	1.00e-66	244.00
IUUC-Gga-040909	Gallus gallus	92.19	7.00e-67	244.00
IUUC-Gac-041640	Gasterosteus aculeatus	92.19	7.00e-67	244.00
IUUC-Gma-043254	Glycine max	100.00	3.00e-74	269.00
IUUC-Ggo-045411	Gorilla gorilla	92.19	5.00e-67	244.00
IUUC-Hsa-046609	Homo sapiens	72.99	1.00e-51	194.00
IUUC-Hvu-047579	Hordeum vulgare	70.59	1.00e-51	194.00
IUUC-Itr-048586	Ictidomys tridecemlineatus	92.19	3.00e-67	247.00
IUUC-Kpa-049279	Komagataella pastoris	90.62	7.00e-66	241.00
IUUC-Lch-049971	Latimeria chalumnae	92.19	1.00e-66	244.00
IUUC-Lpe-051472	Leersia perrieri	82.58	2.00e-53	202.00
IUUC-Loc-052117	Lepisosteus oculatus	92.19	6.00e-67	245.00
IUUC-Lma-053049	Leptosphaeria maculans	93.75	9.00e-68	247.00
IUUC-Laf-054284	Loxodonta africana	92.19	2.00e-67	247.00
IUUC-Mcc-055710	Macaca mulatta	90.77	1.00e-65	241.00
IUUC-Meu-056411	Macropus eugenii	92.19	5.00e-67	244.00
IUUC-Mor-057008	Magnaporthe oryzae	91.41	4.00e-66	242.00
IUUC-Mpo-057360	Magnaporthe poae	91.41	3.00e-66	242.00
IUUC-Mtr-058437	Medicago truncatula	99.22	1.00e-72	263.00
IUUC-Mla-059080	Melampsora laricipopulina	90.29	6.00e-50	187.00
IUUC-Mmr-061335	Microcebus murinus	86.72	1.00e-60	223.00
IUUC-Mdo-062752	Monodelphis domestica	92.19	5.00e-67	244.00
IUUC-Mmu-063548	Mus musculus	92.19	3.00e-67	247.00
IUUC-Mac-064915	Musa acuminata	99.22	6.00e-73	264.00
IUUC-Mpu-066513	Mustela putorius furo	92.19	5.00e-67	244.00
IUUC-Mlu-068010	Myotis lucifugus	89.84	2.00e-65	239.00
IUUC-Nfi-068358	Neosartorya fischeri	91.27	1.00e-64	237.00
IUUC-Ncr-068799	Neurospora crassa	91.41	4.00e-66	241.00
IUUC-Opr-070655	Ochotona princeps	92.19	5.00e-67	244.00
IUUC-Ont-072180	Oreochromis niloticus	92.86	3.00e-66	242.00
IUUC-Oan-073196	Ornithorhynchus anatinus	92.19	5.00e-67	244.00
IUUC-Oba-075092	Oryza barthii	99.22	1.00e-72	263.00
IUUC-Obr-076156	Oryza brachyantha	99.22	3.00e-72	262.00
IUUC-Ogl-077471	Oryza glaberrima	99.22	1.00e-72	263.00
IUUC-Ogu-078259	Oryza glumaepatula	99.22	1.00e-72	263.00
IUUC-Oin-079901	Oryza indica	99.22	1.00e-72	263.00
IUUC-Ome-081343	Oryza meridionalis	99.22	1.00e-72	263.00
IUUC-Oni-082301	Oryza nivara	84.16	3.00e-35	140.00
IUUC-Opu-083839	Oryza punctata	66.92	2.00e-37	149.00
IUUC-Oru-085252	Oryza rufipogon	99.22	1.00e-72	263.00
IUUC-Osa-085747	Oryza sativa	80.60	1.00e-52	197.00
IUUC-Ola-086333	Oryzias latipes	91.41	1.00e-66	243.00
IUUC-Olu-087819	Ostreococcus lucimarinus	85.16	3.00e-62	229.00
IUUC-Oga-088027	Otolemur garnettii	92.19	5.00e-67	244.00
IUUC-Oar-090419	Ovis aries	92.19	5.00e-67	244.00
IUUC-Ptr-091593	Pan troglodytes	92.19	5.00e-67	244.00
IUUC-Pan-091806	Papio anubis	89.84	9.00e-66	240.00
IUUC-Psi-093654	Pelodiscus sinensis	92.19	5.00e-67	244.00
IUUC-Ppa-095174	Physcomitrella patens	98.44	2.00e-72	262.00
IUUC-Pfo-096492	Poecilia formosa	92.19	8.00e-67	244.00
IUUC-Pab-098004	Pongo abelii	92.19	5.00e-67	244.00
IUUC-Pop-098929	Populus trichocarpa	99.22	6.00e-73	264.00
IUUC-Ppe-101497	Prunus persica	99.22	3.00e-73	265.00
IUUC-Pva-102945	Pteropus vampyrus	92.19	5.00e-67	244.00
IUUC-Pgr-103268	Puccinia graminis	90.62	4.00e-66	243.00
IUUC-Ptt-103804	Puccinia triticina	93.07	6.00e-52	195.00
IUUC-Pte-104101	Pyrenophora teres	92.19	5.00e-67	245.00
IUUC-Pyt-104639	Pyrenophora triticirepentis	92.19	1.00e-66	243.00
IUUC-Rno-105290	Rattus norvegicus	92.19	5.00e-67	244.00
IUUC-Sce-106249	Saccharomyces cerevisiae	90.62	4.00e-66	241.00
IUUC-Sha-106570	Sarcophilus harrisii	92.19	5.00e-67	244.00
IUUC-Sja-107834	Schizosaccharomyces japonicus	92.19	9.00e-67	244.00
IUUC-Spo-108045	Schizosaccharomyces pombe	91.41	4.00e-66	241.00
IUUC-Ssl-108670	Sclerotinia sclerotiorum	92.19	9.00e-67	244.00
IUUC-Sit-110085	Setaria italica	96.03	2.00e-70	257.00
IUUC-Sly-111884	Solanum lycopersicum	99.22	6.00e-73	264.00
IUUC-Stu-112385	Solanum tuberosum	98.35	3.00e-68	248.00
IUUC-Sar-112942	Sorex araneus	90.62	5.00e-66	241.00
IUUC-Sbi-114790	Sorghum bicolor	98.44	8.00e-72	260.00
IUUC-Sre-114908	Sporisorium reilianum	91.41	2.00e-65	239.00
IUUC-Ssc-116417	Sus scrofa	92.19	5.00e-67	244.00
IUUC-Tru-117557	Takifugu rubripes	92.19	7.00e-67	244.00
IUUC-Tni-119715	Tetraodon nigroviridis	92.19	7.00e-67	244.00
IUUC-Tvi-122611	Trichoderma virens	89.84	6.00e-66	241.00
IUUC-Tae-123019	Triticum aestivum	80.25	7.00e-67	244.00
IUUC-Tur-126527	Triticum urartu	98.44	3.00e-72	262.00
IUUC-Tme-127138	Tuber melanosporum	92.00	2.00e-65	239.00
IUUC-Ttr-128939	Tursiops truncatus	92.19	5.00e-67	244.00
IUUC-Uma-129619	Ustilago maydis	91.41	2.00e-65	239.00
IUUC-Vda-129775	Verticillium dahliae	89.68	4.00e-64	235.00
IUUC-Vvi-131414	Vitis vinifera	100.00	2.00e-73	266.00
IUUC-Xtr-131921	Xenopus tropicalis	92.19	5.00e-67	244.00
IUUC-Xma-134071	Xiphophorus maculatus	92.19	8.00e-67	244.00
IUUC-Yli-134671	Yarrowia lipolytica	91.41	4.00e-66	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence