iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027980

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

TAF5 RNA polymerase II, TATA box-binding protein (TBP)-associated factor

Genbank Nucleotide ID

CR812943

Gene Name

taf5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000018325.9	ENSDART00000015007.8	ENSDARP00000015825.8

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-46	155.2	497	534
UBD/Beta-Prp	1.90e-84	284.3	429	751

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v++++f +d ++l+s+s Dgti++W+l t+++l
   Q: 497  GHSGPVYGVSFsPDrNYLLSSSEDGTIRLWSLQTFTCL 534
           8*********************************9996 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...............................lrslsgheaevtavkfspdgkilvtg 70
           +t+v+f++d+sl+a g++d+t++vw+vt++kl                                + l gh+++v+ v+fspd+++l+++
   Q: 429  LTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLrkvksaadlnlidkesddvlerimdektsseSKILHGHSGPVYGVSFSPDRNYLLSS 517
           799***********************************************************99999********************** PP
   S: 71   seDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
           seD+ti++w+l+t++c++ +kgh++ v++++fsp g+++vsG+hdr++r+w ++++q l+ +++gh + v+c+++hp++n++++Gs Dr
   Q: 518  SEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVTCTRFHPNSNYVATGSSDR 605
           ************************************************************.**************************** PP
   S: 160  tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           tvrlWd+ +g+++r +tg h+++++sl+f++ngk+l+sgs+dg+v lwd+ +g ++ +l+ght +++ ++fs+++e+++sgs D+++r+
   Q: 606  TVRLWDVLNGNCVRIFTG-HKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRL 693
           *****************9.********************************************************************** PP
   S: 249  W.......dlrsgdllktlqlhn..............ssvisvavlsfgdnvlvlgse 285
           W       d++++d++ ++ + +              s++++v +l+f++++l+l+++
   Q: 694  WdvmraidDVETDDFTAATGHIHlpdnsqelllgtyhSKSTAVIHLHFTRRNLLLAAG 751
           *************************************************999988765 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MRHDVITSSA GGKMAAVQDG PMEVDAEKET KPEILSDGTA NPSGNTGGGT LSSSPLTAAP 60
AAGAPKPEDQ QTLLAVLQFL KRSKLAESVE ILRREAGLAE ELEDSHTDAG AGGKDGDAGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACGTCAGA TTTACGTCAG ACGTACCACA TGCGTCATGA CGTAATCACA TCCAGCGCCG 60
GGGGAAAAAT GGCGGCTGTG CAGGATGGAC CGATGGAGGT GGACGCAGAG AAAGAGACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000851	Aegilops tauschii	49.35	1.00e-67	250.00
IUUC-Aml-001607	Ailuropoda melanoleuca	78.32	0.00e+00	1074.00
IUUC-Atr-003136	Amborella trichopoda	43.86	1.00e-94	340.00
IUUC-Apl-004193	Anas platyrhynchos	84.70	0.00e+00	1042.00
IUUC-Aca-004522	Anolis carolinensis	76.01	0.00e+00	1080.00
IUUC-Aly-006476	Arabidopsis lyrata	47.18	2.00e-88	320.00
IUUC-Ath-006587	Arabidopsis thaliana	47.99	4.00e-88	319.00
IUUC-Ago-007736	Ashbya gossypii	41.71	3.00e-94	340.00
IUUC-Acl-008092	Aspergillus clavatus	37.70	6.00e-82	298.00
IUUC-Afl-008659	Aspergillus flavus	38.88	2.00e-82	300.00
IUUC-Afu-008902	Aspergillus fumigatus	44.89	2.00e-83	303.00
IUUC-Ani-009462	Aspergillus nidulans	39.49	8.00e-85	308.00
IUUC-Aor-010083	Aspergillus oryzae	38.88	2.00e-82	300.00
IUUC-Ate-010271	Aspergillus terreus	40.05	1.00e-82	301.00
IUUC-Ame-010721	Astyanax mexicanus	83.11	0.00e+00	1182.00
IUUC-Bgr-012257	Blumeria graminis	30.26	5.00e-78	285.00
IUUC-Bta-013539	Bos taurus	86.06	0.00e+00	1077.00
IUUC-Bci-013737	Botrytis cinerea	30.58	2.00e-80	293.00
IUUC-Bdi-015041	Brachypodium distachyon	46.22	2.00e-82	300.00
IUUC-Bol-015483	Brassica oleracea	37.64	3.00e-112	399.00
IUUC-Bra-017147	Brassica rapa	37.38	7.00e-113	401.00
IUUC-Cel-018451	Caenorhabditis elegans	34.86	9.00e-92	331.00
IUUC-Cja-018881	Callithrix jacchus	86.35	0.00e+00	1070.00
IUUC-Cfa-020056	Canis familiaris	79.13	0.00e+00	1080.00
IUUC-Cpo-021454	Cavia porcellus	80.82	0.00e+00	1075.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	38.82	2.00e-55	210.00
IUUC-Csa-023045	Chlorocebus sabaeus	86.56	0.00e+00	1031.00
IUUC-Cho-024284	Choloepus hoffmanni	75.37	0.00e+00	833.00
IUUC-Cin-025457	Ciona intestinalis	59.34	2.00e-99	355.00
IUUC-Csv-025882	Ciona savignyi	51.88	5.00e-179	621.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.91	9.00e-76	278.00
IUUC-Cne-026876	Cryptococcus neoformans	40.73	5.00e-74	272.00
IUUC-Cme-027302	Cyanidioschyzon merolae	33.28	8.00e-96	344.00
IUUC-Dno-028863	Dasypus novemcinctus	86.35	0.00e+00	1070.00
IUUC-Dor-030561	Dipodomys ordii	86.35	0.00e+00	1070.00
IUUC-Dse-031547	Dothistroma septosporum	30.56	4.00e-81	295.00
IUUC-Dme-031917	Drosophila melanogaster	40.71	4.00e-145	508.00
IUUC-Ete-032319	Echinops telfairi	68.75	0.00e+00	792.00
IUUC-Eca-033927	Equus caballus	81.25	0.00e+00	1100.00
IUUC-Eeu-034449	Erinaceus europaeus	88.06	0.00e+00	873.00
IUUC-Fca-036325	Felis catus	85.74	0.00e+00	1072.00
IUUC-Fal-036604	Ficedula albicollis	85.57	0.00e+00	1067.00
IUUC-Fox-038049	Fusarium oxysporum	35.67	3.00e-54	207.00
IUUC-Fso-038302	Fusarium solani	37.36	3.00e-59	223.00
IUUC-Gmo-038832	Gadus morhua	79.30	0.00e+00	1052.00
IUUC-Ggr-039878	Gaeumannomyces graminis	29.25	3.00e-71	263.00
IUUC-Gga-041147	Gallus gallus	86.18	0.00e+00	1090.00
IUUC-Gac-041373	Gasterosteus aculeatus	80.67	0.00e+00	1130.00
IUUC-Gma-043230	Glycine max	38.23	9.00e-120	424.00
IUUC-Ggo-045526	Gorilla gorilla	87.77	0.00e+00	719.00
IUUC-Hsa-045971	Homo sapiens	86.35	0.00e+00	1071.00
IUUC-Hvu-047695	Hordeum vulgare	47.34	1.00e-85	310.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	77.56	0.00e+00	1081.00
IUUC-Kpa-049402	Komagataella pastoris	37.72	4.00e-117	415.00
IUUC-Lch-049526	Latimeria chalumnae	83.71	0.00e+00	1013.00
IUUC-Lpe-050793	Leersia perrieri	36.31	4.00e-85	309.00
IUUC-Loc-052882	Lepisosteus oculatus	81.46	0.00e+00	1190.00
IUUC-Lma-053212	Leptosphaeria maculans	30.00	1.00e-77	284.00
IUUC-Laf-053859	Loxodonta africana	85.74	0.00e+00	1073.00
IUUC-Mcc-054957	Macaca mulatta	87.45	0.00e+00	895.00
IUUC-Meu-056766	Macropus eugenii	87.02	2.00e-172	599.00
IUUC-Mor-057024	Magnaporthe oryzae	28.93	6.00e-67	249.00
IUUC-Mpo-057520	Magnaporthe poae	29.91	1.00e-72	267.00
IUUC-Mtr-058754	Medicago truncatula	37.95	1.00e-120	427.00
IUUC-Mla-058881	Melampsora laricipopulina	39.72	5.00e-84	305.00
IUUC-Mga-059776	Meleagris gallopavo	86.18	0.00e+00	1090.00
IUUC-Mvi-060208	Microbotryum violaceum	50.52	2.00e-85	310.00
IUUC-Mmr-061783	Microcebus murinus	87.45	0.00e+00	895.00
IUUC-Mdo-062856	Monodelphis domestica	86.68	0.00e+00	1072.00
IUUC-Mmu-064218	Mus musculus	79.10	0.00e+00	1079.00
IUUC-Mac-064886	Musa acuminata	53.46	4.00e-72	266.00
IUUC-Mpu-065735	Mustela putorius furo	77.68	0.00e+00	1073.00
IUUC-Mlu-067544	Myotis lucifugus	86.37	0.00e+00	1064.00
IUUC-Nfi-068502	Neosartorya fischeri	39.54	5.00e-84	305.00
IUUC-Ncr-068891	Neurospora crassa	31.02	5.00e-76	279.00
IUUC-Nle-069389	Nomascus leucogenys	86.35	0.00e+00	1072.00
IUUC-Opr-071042	Ochotona princeps	76.88	6.00e-175	607.00
IUUC-Ont-071455	Oreochromis niloticus	85.10	0.00e+00	1142.00
IUUC-Oan-073181	Ornithorhynchus anatinus	86.18	0.00e+00	1065.00
IUUC-Ocu-073758	Oryctolagus cuniculus	85.53	0.00e+00	1073.00
IUUC-Oba-075739	Oryza barthii	44.80	1.00e-78	287.00
IUUC-Obr-076111	Oryza brachyantha	46.55	5.00e-94	338.00
IUUC-Ogl-077914	Oryza glaberrima	44.38	2.00e-81	296.00
IUUC-Ogu-078190	Oryza glumaepatula	48.91	4.00e-80	292.00
IUUC-Oin-079473	Oryza indica	45.93	4.00e-84	305.00
IUUC-Olo-080645	Oryza longistaminata	50.67	2.00e-68	253.00
IUUC-Ome-081831	Oryza meridionalis	51.19	2.00e-69	256.00
IUUC-Oni-082431	Oryza nivara	34.60	1.00e-94	340.00
IUUC-Opu-083325	Oryza punctata	33.67	5.00e-88	318.00
IUUC-Oru-085154	Oryza rufipogon	49.46	1.00e-79	291.00
IUUC-Osa-086189	Oryza sativa	45.93	4.00e-84	305.00
IUUC-Ola-086574	Oryzias latipes	83.36	0.00e+00	1184.00
IUUC-Olu-087616	Ostreococcus lucimarinus	39.16	2.00e-83	303.00
IUUC-Oga-088827	Otolemur garnettii	86.35	0.00e+00	1070.00
IUUC-Oar-089648	Ovis aries	86.06	0.00e+00	1077.00
IUUC-Ptr-091195	Pan troglodytes	78.70	0.00e+00	1080.00
IUUC-Pan-091978	Papio anubis	86.51	0.00e+00	1074.00
IUUC-Psi-093598	Pelodiscus sinensis	87.18	0.00e+00	997.00
IUUC-Pno-094823	Phaeosphaeria nodorum	29.73	1.00e-82	300.00
IUUC-Ppa-095455	Physcomitrella patens	37.16	4.00e-111	395.00
IUUC-Pfo-097120	Poecilia formosa	79.84	0.00e+00	1119.00
IUUC-Pab-098771	Pongo abelii	86.35	0.00e+00	1071.00
IUUC-Pop-099542	Populus trichocarpa	44.36	6.00e-95	342.00
IUUC-Pca-100804	Procavia capensis	76.85	0.00e+00	822.00
IUUC-Ppe-101686	Prunus persica	38.16	4.00e-110	392.00
IUUC-Pva-102414	Pteropus vampyrus	80.39	0.00e+00	979.00
IUUC-Pgr-103603	Puccinia graminis	42.57	6.00e-77	282.00
IUUC-Ptt-103995	Puccinia triticina	40.00	1.00e-73	272.00
IUUC-Pte-104359	Pyrenophora teres	29.50	2.00e-80	293.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	29.50	2.00e-81	297.00
IUUC-Rno-105064	Rattus norvegicus	79.24	0.00e+00	1080.00
IUUC-Sce-106186	Saccharomyces cerevisiae	42.72	3.00e-91	329.00
IUUC-Sha-106582	Sarcophilus harrisii	86.54	0.00e+00	1065.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	37.92	4.00e-112	398.00
IUUC-Spo-108142	Schizosaccharomyces pombe	36.13	8.00e-109	387.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	29.86	2.00e-80	293.00
IUUC-Smo-109097	Selaginella moellendorffii	37.19	1.00e-107	383.00
IUUC-Sit-109804	Setaria italica	36.97	9.00e-103	367.00
IUUC-Sly-111693	Solanum lycopersicum	36.89	7.00e-109	388.00
IUUC-Sar-113412	Sorex araneus	87.08	0.00e+00	713.00
IUUC-Sbi-114849	Sorghum bicolor	36.66	1.00e-101	364.00
IUUC-Sre-114945	Sporisorium reilianum	36.19	4.00e-79	290.00
IUUC-Ssc-115582	Sus scrofa	71.12	0.00e+00	863.00
IUUC-Tgu-116899	Taeniopygia guttata	78.17	0.00e+00	1074.00
IUUC-Tru-118011	Takifugu rubripes	84.66	0.00e+00	1129.00
IUUC-Tni-120598	Tetraodon nigroviridis	79.95	0.00e+00	1124.00
IUUC-Tca-121247	Theobroma cacao	35.68	2.00e-112	400.00
IUUC-Tre-121949	Trichoderma reesei	36.27	2.00e-64	240.00
IUUC-Tvi-122626	Trichoderma virens	32.59	8.00e-66	245.00
IUUC-Tae-123335	Triticum aestivum	47.97	1.00e-87	317.00
IUUC-Tur-126005	Triticum urartu	33.70	3.00e-82	299.00
IUUC-Tme-126904	Tuber melanosporum	42.48	2.00e-92	333.00
IUUC-Tbe-127254	Tupaia belangeri	73.44	0.00e+00	986.00
IUUC-Ttr-128544	Tursiops truncatus	85.58	0.00e+00	1071.00
IUUC-Uma-129379	Ustilago maydis	38.20	5.00e-78	286.00
IUUC-Vda-129761	Verticillium dahliae	33.67	1.00e-58	221.00
IUUC-Vpa-130485	Vicugna pacos	79.13	0.00e+00	1075.00
IUUC-Vvi-131171	Vitis vinifera	36.59	1.00e-114	407.00
IUUC-Xtr-132762	Xenopus tropicalis	68.75	0.00e+00	915.00
IUUC-Xma-133583	Xiphophorus maculatus	79.81	0.00e+00	1122.00
IUUC-Yli-134446	Yarrowia lipolytica	37.63	2.00e-120	426.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence