iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107810

Ensembl Protein ID

EEB09520

UniProt Accession

B6K7L6; B6K7L6_SCHJY

Genbank Protein ID

EEB09520.1

Protein Name

CCR4-Not complex subunit Caf4/Mdv1

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_04732

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_04732	EEB09520	EEB09520

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-32	106.0	432	469
UBD/Beta-Prp	2.00e-44	150.0	316	659

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllks 38
           Ht+s+t+l++ +++ lv+G++D+ti+ WD+ tg+++++
   Q: 432  HTESITALSLsPENVLVTGANDKTIRQWDMLTGRCVQT 469
           9*********988**********************996 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls........................ 82
           + ++ ++it+++f +   ll+ +++dgt+ vwd+++ k+l +l gh++ v +++  ++  i vtgs Drt+++w+l+                        
   Q: 316  EVSQGQPITALDFNEPFGLLLPACADGTVNVWDLSSTKCLGELVGHTQRVPCLSARDS--IAVTGSWDRTARIWNLQnclrsenpsdgtetvydsdtyyfa 414
           5567899******99999************************************9999..***************************************** PP
   S: 83   .......tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...................tlsghdgvvncvvvhpdgnllvsGsl 157
                  +   v +l+ h++s+++ls+sp  ++lv+G +d+tir wd+ tg c+++                   +l        + ++++ +  ++sG+ 
   Q: 415  edaphvhAERAVAVLSSHTESITALSLSP-ENVLVTGANDKTIRQWDMLTGRCVQTldlvwtvaqeaatghastvPLHSSLNEPLVGALDCLDAAVASGTS 514
           *****************************.9******************************************77777777777888999999******** PP
   S: 158  DrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllk 258
           D+++rlWdl+ g   r l g ht+ ++ l+fd    ++ sgs+d tv++wdl+ g++ ++++    +v+sv +s++   + s++  + + + d   + ++ 
   Q: 515  DGIIRLWDLRVGLSQRSLCG-HTGLITALQFDG--VYVFSGSQDHTVRIWDLRMGSVCESVT-FAGPVSSVCVSEDRFAVSSVG--EPLCVLDPNERRTWI 609
           *******************9.***********9..9*******************9766554.567899999996666666666..444444555555555 PP
   S: 259  tlqlhn...............ssvisvavlsfgdnvlvlgsedskvniwk 293
           + q +                +s++ v++l+++d+ lv+g e + v +++
   Q: 610  CDQVSSghgslpddheipssnTSFSNVTALQYKDRFLVSGNELGVVSMFS 659
           55555455688888899999999999999***********9988888875 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MDENSELLTP ELASKRASKA ESLTTFRQHF HRWIQAIRYT ASSIFSHNEL NTIVQPLKRP 60
FLFLARPSNS PDLACNPGAN ESSGSQNALE GRETPEMTKF LREIPQPSSS YSLLDGFQAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCAAAAGC TGCACTGGAA CGAAAACGGT CGCCGAATGT TCCTTTGCTG TATTGCTGAC 60
GGTATAACTT AACTTCGTCA TTTTCATTTA AGTCAATTGT CATCGTCCGG TTTGGTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005739--C:mitochondrion

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007941	Ashbya gossypii	33.43	4.00e-55	207.00
IUUC-Acl-008165	Aspergillus clavatus	37.75	4.00e-62	230.00
IUUC-Afl-008726	Aspergillus flavus	39.88	3.00e-59	219.00
IUUC-Afu-009086	Aspergillus fumigatus	37.50	1.00e-61	228.00
IUUC-Ani-009192	Aspergillus nidulans	37.17	2.00e-61	228.00
IUUC-Ang-009540	Aspergillus niger	32.18	3.00e-65	241.00
IUUC-Aor-010128	Aspergillus oryzae	39.88	1.00e-60	225.00
IUUC-Ate-010579	Aspergillus terreus	32.47	4.00e-69	253.00
IUUC-Bgr-012212	Blumeria graminis	29.36	3.00e-65	240.00
IUUC-Bci-013867	Botrytis cinerea	29.12	6.00e-67	246.00
IUUC-Cgl-026600	Colletotrichum gloeosporioides	31.16	4.00e-65	240.00
IUUC-Cne-027030	Cryptococcus neoformans	30.00	2.00e-46	178.00
IUUC-Dse-031481	Dothistroma septosporum	34.37	4.00e-58	217.00
IUUC-Fox-037725	Fusarium oxysporum	31.90	8.00e-72	262.00
IUUC-Fso-038270	Fusarium solani	31.44	1.00e-66	246.00
IUUC-Ggr-039837	Gaeumannomyces graminis	31.05	8.00e-62	229.00
IUUC-Kpa-049115	Komagataella pastoris	29.17	1.00e-61	228.00
IUUC-Lma-053086	Leptosphaeria maculans	29.82	1.00e-59	222.00
IUUC-Mor-056934	Magnaporthe oryzae	37.92	5.00e-64	236.00
IUUC-Mpo-057367	Magnaporthe poae	31.27	7.00e-61	226.00
IUUC-Mla-058916	Melampsora laricipopulina	33.33	2.00e-49	187.00
IUUC-Mvi-060499	Microbotryum violaceum	33.05	2.00e-44	171.00
IUUC-Nfi-068414	Neosartorya fischeri	30.32	3.00e-61	227.00
IUUC-Ncr-068861	Neurospora crassa	30.32	9.00e-68	249.00
IUUC-Pno-095117	Phaeosphaeria nodorum	31.89	4.00e-63	233.00
IUUC-Ptt-103881	Puccinia triticina	31.37	2.00e-48	185.00
IUUC-Pte-104262	Pyrenophora teres	30.66	2.00e-38	152.00
IUUC-Pyt-104679	Pyrenophora triticirepentis	37.54	4.00e-59	219.00
IUUC-Sce-106213	Saccharomyces cerevisiae	35.34	8.00e-56	209.00
IUUC-Spo-108016	Schizosaccharomyces pombe	32.80	8.00e-89	319.00
IUUC-Ssl-108498	Sclerotinia sclerotiorum	29.90	3.00e-61	227.00
IUUC-Sre-115117	Sporisorium reilianum	31.08	2.00e-46	179.00
IUUC-Tre-122068	Trichoderma reesei	32.59	8.00e-65	240.00
IUUC-Tvi-122485	Trichoderma virens	32.40	2.00e-64	239.00
IUUC-Tme-127188	Tuber melanosporum	31.43	5.00e-62	230.00
IUUC-Uma-129325	Ustilago maydis	30.86	3.00e-47	181.00
IUUC-Vda-130011	Verticillium dahliae	30.78	2.00e-62	231.00
IUUC-Yli-134598	Yarrowia lipolytica	30.63	5.00e-60	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence