iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005938

Ensembl Protein ID

fgenesh1_pg.C_scaffold_8002613

UniProt Accession

D7MV54; D7MV54_ARALL

Genbank Protein ID

EFH42966.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_358826

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_8002613	fgenesh1_pg.C_scaffold_8002613	fgenesh1_pg.C_scaffold_8002613

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.60e-27	93.9	236	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+C++slelM+dPv+++sG+ty+r  I+kw++ g   cP+trq+l++++l+Pn  +r+   +wce+n++
   Q: 236  VPSDFRCSLSLELMTDPVIVASGQTYERVFIQKWIDMGLMVCPKTRQSLSHTTLTPNFIVRAFLASWCETNNV 308
           8*********************************************************************975 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEVSWLRVLL DNISSYLTLS SMDDLSSNPA LKYYTRGEEI SNLLKPVLEN LIDSDAAPSE 60
LLNNGFEELA QYCDELREQF ESWQPLSTRI FYVLRIESLA SKLRESSLEV FQLLKHCEQH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTGT CTTGGTTACG AGTTCTTCTA GATAACATCT CCTCCTATCT AACTTTATCA 60
TCTATGGACG ACTTATCTTC AAACCCTGCT CTTAAGTACT ACACCAGAGG TGAAGAGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_358826

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007575	Arabidopsis thaliana	94.08	0.00e+00	1267.00
IUUC-Afl-008696	Aspergillus flavus	29.92	4.00e-21	95.50
IUUC-Aor-010194	Aspergillus oryzae	29.92	4.00e-21	95.50
IUUC-Bol-015195	Brassica oleracea	76.99	0.00e+00	1105.00
IUUC-Bra-016628	Brassica rapa	77.54	0.00e+00	1105.00
IUUC-Cel-018336	Caenorhabditis elegans	34.15	9.00e-12	65.90
IUUC-Cja-019770	Callithrix jacchus	36.07	2.00e-09	55.80
IUUC-Mac-065111	Musa acuminata	40.31	1.00e-132	466.00
IUUC-Pop-099451	Populus trichocarpa	56.10	0.00e+00	774.00
IUUC-Ppe-101233	Prunus persica	55.65	0.00e+00	747.00
IUUC-Ptt-103922	Puccinia triticina	30.08	1.00e-10	59.70
IUUC-Sce-106415	Saccharomyces cerevisiae	29.88	3.00e-20	92.80
IUUC-Smo-108857	Selaginella moellendorffii	45.09	1.00e-110	393.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence