iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099421

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_252038; POPTR_0015s08610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s08610	POPTR_0015s08610.1	POPTR_0015s08610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.10e-08	33.8	235	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   ++++ lpC H fh +C+  w       + + +CP Cr
   Q: 235  CPICLEEFhvGNEVRGLPCAHNFHVECIDEW------LRLNVKCPRCR 276
           ********99666******************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAIRGVDFKW YDGFFLSMLA TSAIIVAINW KRYRLCTYPL HIWIMVDYTT VFVFRLLMFI 60
DNGLAAGMGL DFGWQQRYAR FCGRIVVLSI LSLLLYPFLW AWTIIGTLWF TNARDCLPEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTAATCCA GTTTCAGTTA CTAATAATTA CTGCATTTAG TAAAAAAAAA CATAGGACTC 60
CGTAGATGAA AGATTCTGAT TCATTTCTCG TACCTGATGA GTTTACGAGG ATTGTTTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0015s08610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	84.46	2.00e-149	521.00
IUUC-Atr-002648	Amborella trichopoda	76.99	1.00e-155	541.00
IUUC-Aly-006490	Arabidopsis lyrata	74.65	4.00e-153	533.00
IUUC-Ath-007655	Arabidopsis thaliana	73.80	5.00e-152	530.00
IUUC-Bdi-014759	Brachypodium distachyon	76.54	2.00e-137	481.00
IUUC-Cel-018152	Caenorhabditis elegans	34.65	5.00e-13	66.60
IUUC-Dme-031973	Drosophila melanogaster	43.84	3.00e-13	70.90
IUUC-Gma-042879	Glycine max	82.68	2.00e-172	597.00
IUUC-Hvu-047589	Hordeum vulgare	85.03	2.00e-68	250.00
IUUC-Mtr-058746	Medicago truncatula	82.40	1.00e-172	598.00
IUUC-Mac-064833	Musa acuminata	81.61	5.00e-161	560.00
IUUC-Oba-075099	Oryza barthii	77.16	1.00e-150	525.00
IUUC-Obr-076541	Oryza brachyantha	75.00	2.00e-152	531.00
IUUC-Ogl-077544	Oryza glaberrima	77.16	1.00e-150	525.00
IUUC-Ogu-078123	Oryza glumaepatula	72.70	9.00e-138	482.00
IUUC-Oin-079313	Oryza indica	81.21	3.00e-144	504.00
IUUC-Olo-080383	Oryza longistaminata	58.51	3.00e-94	338.00
IUUC-Ome-081106	Oryza meridionalis	69.77	4.00e-114	403.00
IUUC-Oni-082730	Oryza nivara	81.63	6.00e-154	536.00
IUUC-Opu-083224	Oryza punctata	77.01	1.00e-152	531.00
IUUC-Oru-085150	Oryza rufipogon	82.22	7.00e-125	439.00
IUUC-Osa-085392	Oryza sativa	82.91	7.00e-150	522.00
IUUC-Ppa-095217	Physcomitrella patens	51.25	5.00e-73	266.00
IUUC-Ppe-101399	Prunus persica	80.12	1.00e-148	518.00
IUUC-Ssl-108585	Sclerotinia sclerotiorum	48.28	4.00e-10	59.30
IUUC-Smo-109501	Selaginella moellendorffii	68.49	2.00e-115	407.00
IUUC-Sit-109685	Setaria italica	79.07	7.00e-153	533.00
IUUC-Sly-111730	Solanum lycopersicum	82.10	2.00e-168	584.00
IUUC-Stu-112358	Solanum tuberosum	77.96	6.00e-166	576.00
IUUC-Sbi-114646	Sorghum bicolor	75.07	1.00e-151	528.00
IUUC-Tca-121643	Theobroma cacao	86.35	2.00e-179	621.00
IUUC-Tae-124899	Triticum aestivum	78.81	1.00e-149	522.00
IUUC-Tur-126639	Triticum urartu	84.21	3.00e-121	428.00
IUUC-Vvi-131627	Vitis vinifera	77.55	2.00e-164	571.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence