iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017291

Ensembl Protein ID

Bra026420.1-P

UniProt Accession

M4ECB1; M4ECB1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026420	Bra026420.1	Bra026420.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-06	27.9	297	338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +  k++++ lpC H fh +C+ +w       +   +CPlC+
   Q: 297  CCICLAKYkdKEEVRKLPCSHRFHVKCVDQW------LRIISSCPLCK 338
           ********77556******************......99999*****7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSTRYSTQLQ SSAITSITVS SSSSLDTTTP RDDDNTRMSP ASNARVNSPT SFLIRLAMRV 60
SRARWFIFLR RVFHYQNGSR SDLGANPFES TTWMISELIA LLVQITVITF TLALSKNERP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTACAC GTTATTCAAC TCAACTGCAA TCATCAGCCA TTACATCCAT CACCGTCTCC 60
TCATCTTCCT CCTTAGACAC CACCACTCCA CGAGATGATG ATAACACTCG CATGTCTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000590	Aegilops tauschii	56.38	3.00e-85	307.00
IUUC-Bdi-014673	Brachypodium distachyon	55.52	1.00e-86	312.00
IUUC-Bol-015486	Brassica oleracea	97.38	5.00e-172	596.00
IUUC-Gma-043271	Glycine max	70.33	5.00e-113	400.00
IUUC-Lpe-051355	Leersia perrieri	56.16	3.00e-84	304.00
IUUC-Mac-065295	Musa acuminata	61.19	2.00e-83	301.00
IUUC-Oba-075888	Oryza barthii	57.19	6.00e-88	317.00
IUUC-Obr-076365	Oryza brachyantha	57.53	3.00e-88	317.00
IUUC-Ogl-077396	Oryza glaberrima	54.25	1.00e-85	309.00
IUUC-Ogu-078273	Oryza glumaepatula	57.19	6.00e-88	317.00
IUUC-Oin-079923	Oryza indica	57.19	3.00e-88	318.00
IUUC-Olo-080790	Oryza longistaminata	56.85	5.00e-90	323.00
IUUC-Oni-083024	Oryza nivara	57.19	6.00e-88	317.00
IUUC-Opu-083493	Oryza punctata	57.19	7.00e-88	316.00
IUUC-Oru-084870	Oryza rufipogon	57.19	6.00e-88	317.00
IUUC-Osa-086097	Oryza sativa	57.19	6.00e-88	317.00
IUUC-Pop-099848	Populus trichocarpa	67.28	1.00e-120	425.00
IUUC-Ppe-101467	Prunus persica	68.45	4.00e-120	424.00
IUUC-Sit-110094	Setaria italica	56.85	6.00e-92	330.00
IUUC-Sbi-114759	Sorghum bicolor	55.63	8.00e-88	316.00
IUUC-Tae-123082	Triticum aestivum	56.16	2.00e-88	318.00
IUUC-Vvi-131737	Vitis vinifera	67.18	2.00e-118	418.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence