iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099848

UUCD1 version

UUC-PoT-00409

Ensembl Protein ID

POPTR_0001s38010.1

UniProt Accession

B9GG07; B9GG06; B9GG07_POPTR

Genbank Protein ID

EEE83688.1; EEE83689.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337; CM000337

Gene Name

POPTRDRAFT_1070125; POPTR_0001s38010g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s38010	POPTR_0001s38010.1	POPTR_0001s38010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.70e-06	27.6	295	336

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +  k++++ lpC H+fh++C+ +w       +    CPlC+
   Q: 295  CCICLAKYkdKEEVRKLPCSHMFHLKCVDQW------LRIISCCPLCK 336
           ********77556******************......99999*****6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNTRYPFPMN SFCGSSPVAS PAGEEHGTVS LRNRSARTPT SSLLVRTAMR ISRARWFTFL 60
RRVFHYQNGS RSNLGSNPFN SSPWMMLEFV ALVIQISITM FTLAISKAEK PVWPVRIWII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGGCCTTTG CAGTTGATTC TTGGTCACCA TCTGAAACCC CACCTTCACC TTCCTGTCAT 60
ATTCACACTC CACAACCATC TCTCCATTTC TCCTTGCTCT ATCTTTCCTT ATACACTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s38010g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000590	Aegilops tauschii	58.13	8.00e-87	312.00
IUUC-Bdi-014673	Brachypodium distachyon	56.27	7.00e-87	313.00
IUUC-Bol-015486	Brassica oleracea	66.67	2.00e-116	411.00
IUUC-Bra-017291	Brassica rapa	70.36	2.00e-116	411.00
IUUC-Gma-043271	Glycine max	74.15	3.00e-125	441.00
IUUC-Lpe-051355	Leersia perrieri	56.00	2.00e-84	304.00
IUUC-Mac-065295	Musa acuminata	63.82	1.00e-83	301.00
IUUC-Oba-075888	Oryza barthii	56.67	2.00e-87	314.00
IUUC-Obr-076365	Oryza brachyantha	57.33	7.00e-88	316.00
IUUC-Ogl-077396	Oryza glaberrima	55.84	6.00e-87	313.00
IUUC-Ogu-078273	Oryza glumaepatula	56.67	2.00e-87	314.00
IUUC-Oin-079923	Oryza indica	57.00	7.00e-88	316.00
IUUC-Olo-080790	Oryza longistaminata	57.00	9.00e-90	322.00
IUUC-Oni-083024	Oryza nivara	56.67	2.00e-87	314.00
IUUC-Opu-083493	Oryza punctata	57.33	2.00e-87	315.00
IUUC-Oru-084870	Oryza rufipogon	56.67	2.00e-87	314.00
IUUC-Osa-086097	Oryza sativa	56.67	2.00e-87	314.00
IUUC-Ppe-101467	Prunus persica	70.03	2.00e-133	468.00
IUUC-Sit-110094	Setaria italica	56.15	2.00e-90	324.00
IUUC-Sbi-114759	Sorghum bicolor	56.33	3.00e-88	317.00
IUUC-Tae-123082	Triticum aestivum	57.33	2.00e-89	321.00
IUUC-Vvi-131737	Vitis vinifera	73.12	1.00e-140	491.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence