iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118285

Ensembl Protein ID

ENSTRUP00000019539.1

UniProt Accession

H2T4F1; H2T4F1_TAKRU

Protein Name

Uncharacterized protein

Gene Name

rrp9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000007858.1	ENSTRUT00000019618.1	ENSTRUP00000019539.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-31	106.3	325	360
UBD/Beta-Prp	1.70e-58	199.4	148	409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvl 35
           gH++s+ c+++ ++ ++++G+dDg++ +W++ + ++
   Q: 325  GHEGSIDCVQLiNEEHMITGADDGSVCLWSVNRKKP 360
           8*********9999****************976655 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           hk +itc+ ++ d+++++++ +d +i+ wdv++gk+             +  gh++ + ++  s+d+k+l+tg   ++i +w+ +t+k 
   Q: 148  HKLPITCLVITSDDKHIFSAAKDCSIIKWDVESGKKlhkipggrkgtEDRHVGHTGHILCMAVSSDAKYLATGDMNKLIMIWEAETCKH 236
           899*********************************777777777766666777777******************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           +++++gh+  v  lsf + ++ l s+shdr ++vw+++++  +e tl gh+++++++   + ++++ +G+ Dr vr+W+++ ++ l  +
   Q: 237  LYKFTGHKGPVSGLSFRRGSHDLYSASHDRSVKVWNVDENAYVE-TLFGHQDAITGLDCLSRERCVTTGGRDRSVRVWKIAEESQL-VF 323
           ******************99***********************9.***********************************766666.68 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght...........dnvksvrfspnderlvsgssDgsiriWdlr 252
            g h++s+ ++++  + +++++g++dg+v lw++ +++ + t++               +v sv++++n++ ++sgs+   +++W + 
   Q: 324  HG-HEGSIDCVQLINE-EHMITGADDGSVCLWSVNRKKPLSTVKQAHgchgdagleqpHWVASVAALQNSDTVASGSHNSLVQLWKCA 409
           88.*********9886.7************************998666999**********************************664 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MSSSFFIRAK QKPKLAQKGK IAVASKRKVD GDSGGKKVRA TKPNSKYNEE ISSESETESN 60
VEPKKRRPIE EQEYEETPQE KKLRLAKLYI DQLKEEEEQK ADDETFESDL VAGRLQEEVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGAGTTATC TTTACCTGCA GTTATCTTTG GATTTAAAAC CCTTTAAACG TATTTGAACA 60
TGTCTTCGTC TTTCTTTATA AGGGCAAAAC AAAAGCCAAA ATTAGCTCAA AAAGGAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0006364--P:rRNA processing

KEGG

tru:101079615

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	36.22	2.00e-67	249.00
IUUC-Aml-002072	Ailuropoda melanoleuca	66.50	7.00e-157	546.00
IUUC-Atr-002824	Amborella trichopoda	40.36	9.00e-77	280.00
IUUC-Apl-003264	Anas platyrhynchos	68.80	1.00e-151	528.00
IUUC-Aca-004898	Anolis carolinensis	76.96	1.00e-176	612.00
IUUC-Aly-006383	Arabidopsis lyrata	38.50	3.00e-66	245.00
IUUC-Ath-007119	Arabidopsis thaliana	37.77	2.00e-79	289.00
IUUC-Ago-007710	Ashbya gossypii	28.18	3.00e-59	223.00
IUUC-Acl-008345	Aspergillus clavatus	30.89	8.00e-58	218.00
IUUC-Afl-008718	Aspergillus flavus	31.52	1.00e-57	218.00
IUUC-Afu-008966	Aspergillus fumigatus	28.94	4.00e-52	199.00
IUUC-Ani-009214	Aspergillus nidulans	30.31	9.00e-59	221.00
IUUC-Ang-009774	Aspergillus niger	32.76	8.00e-61	228.00
IUUC-Aor-009956	Aspergillus oryzae	31.52	1.00e-57	218.00
IUUC-Ate-010449	Aspergillus terreus	31.89	5.00e-58	219.00
IUUC-Ame-011860	Astyanax mexicanus	79.85	0.00e+00	681.00
IUUC-Bgr-012213	Blumeria graminis	32.79	1.00e-68	254.00
IUUC-Bta-012698	Bos taurus	68.64	2.00e-160	558.00
IUUC-Bci-013973	Botrytis cinerea	29.54	7.00e-66	244.00
IUUC-Bdi-014790	Brachypodium distachyon	38.85	3.00e-73	268.00
IUUC-Bol-015662	Brassica oleracea	39.04	6.00e-74	271.00
IUUC-Bra-016953	Brassica rapa	38.50	3.00e-73	269.00
IUUC-Cel-018616	Caenorhabditis elegans	38.08	8.00e-80	291.00
IUUC-Cja-019532	Callithrix jacchus	67.84	6.00e-161	560.00
IUUC-Cfa-020961	Canis familiaris	63.49	1.00e-154	539.00
IUUC-Cpo-021527	Cavia porcellus	67.50	1.00e-156	545.00
IUUC-Csa-023106	Chlorocebus sabaeus	68.09	1.00e-158	553.00
IUUC-Cin-025670	Ciona intestinalis	51.23	1.00e-126	446.00
IUUC-Csv-026172	Ciona savignyi	51.63	2.00e-118	419.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	34.46	2.00e-68	253.00
IUUC-Cne-027070	Cryptococcus neoformans	30.04	7.00e-47	181.00
IUUC-Cme-027125	Cyanidioschyzon merolae	25.34	1.00e-36	147.00
IUUC-Dre-027919	Danio rerio	75.48	0.00e+00	662.00
IUUC-Dno-029684	Dasypus novemcinctus	66.47	4.00e-123	434.00
IUUC-Dor-030363	Dipodomys ordii	61.19	5.00e-75	275.00
IUUC-Dse-031503	Dothistroma septosporum	31.76	6.00e-62	231.00
IUUC-Dme-031979	Drosophila melanogaster	44.86	2.00e-99	356.00
IUUC-Eca-033735	Equus caballus	67.41	5.00e-156	543.00
IUUC-Fca-036193	Felis catus	66.91	8.00e-160	556.00
IUUC-Fal-037058	Ficedula albicollis	67.41	8.00e-163	566.00
IUUC-Fox-038036	Fusarium oxysporum	33.62	2.00e-65	243.00
IUUC-Fso-038298	Fusarium solani	33.97	2.00e-65	243.00
IUUC-Gmo-038796	Gadus morhua	71.64	3.00e-180	624.00
IUUC-Ggr-040074	Gaeumannomyces graminis	28.66	1.00e-60	227.00
IUUC-Gga-040743	Gallus gallus	71.84	8.00e-123	432.00
IUUC-Gac-042583	Gasterosteus aculeatus	75.15	0.00e+00	747.00
IUUC-Gma-042659	Glycine max	40.10	2.00e-84	306.00
IUUC-Ggo-045543	Gorilla gorilla	66.75	4.00e-158	550.00
IUUC-Hsa-047017	Homo sapiens	67.48	4.00e-159	554.00
IUUC-Hvu-047173	Hordeum vulgare	38.85	2.00e-77	283.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	64.47	1.00e-161	562.00
IUUC-Kpa-049262	Komagataella pastoris	32.50	2.00e-62	233.00
IUUC-Lch-050566	Latimeria chalumnae	77.14	8.00e-170	590.00
IUUC-Lpe-051651	Leersia perrieri	35.63	3.00e-74	272.00
IUUC-Loc-051997	Lepisosteus oculatus	79.53	0.00e+00	675.00
IUUC-Lma-053182	Leptosphaeria maculans	30.99	1.00e-62	234.00
IUUC-Laf-054105	Loxodonta africana	67.32	1.00e-155	542.00
IUUC-Mcc-055215	Macaca mulatta	67.84	1.00e-158	552.00
IUUC-Meu-055943	Macropus eugenii	64.25	3.00e-154	537.00
IUUC-Mor-057069	Magnaporthe oryzae	31.66	4.00e-64	239.00
IUUC-Mpo-057358	Magnaporthe poae	31.93	8.00e-56	211.00
IUUC-Mtr-058209	Medicago truncatula	41.27	7.00e-86	311.00
IUUC-Mla-059043	Melampsora laricipopulina	29.59	1.00e-51	197.00
IUUC-Mga-060024	Meleagris gallopavo	70.39	2.00e-142	498.00
IUUC-Mvi-060371	Microbotryum violaceum	32.09	2.00e-71	263.00
IUUC-Mmr-061403	Microcebus murinus	67.57	1.00e-162	566.00
IUUC-Mdo-063026	Monodelphis domestica	68.19	2.00e-160	558.00
IUUC-Mmu-063646	Mus musculus	66.50	3.00e-160	558.00
IUUC-Mac-064801	Musa acuminata	40.27	5.00e-85	308.00
IUUC-Mpu-065760	Mustela putorius furo	68.69	6.00e-161	560.00
IUUC-Mlu-067963	Myotis lucifugus	67.11	1.00e-158	551.00
IUUC-Nfi-068288	Neosartorya fischeri	30.90	8.00e-55	208.00
IUUC-Ncr-068679	Neurospora crassa	34.15	6.00e-61	228.00
IUUC-Nle-069766	Nomascus leucogenys	62.32	2.00e-141	495.00
IUUC-Opr-070906	Ochotona princeps	66.43	3.00e-158	551.00
IUUC-Ont-071661	Oreochromis niloticus	82.56	0.00e+00	778.00
IUUC-Oan-073465	Ornithorhynchus anatinus	56.48	8.00e-121	427.00
IUUC-Ocu-074263	Oryctolagus cuniculus	67.50	6.00e-159	553.00
IUUC-Oba-075607	Oryza barthii	38.35	2.00e-69	256.00
IUUC-Ogl-077387	Oryza glaberrima	37.34	8.00e-73	267.00
IUUC-Ogu-078323	Oryza glumaepatula	38.16	2.00e-73	269.00
IUUC-Oin-079977	Oryza indica	31.95	2.00e-50	193.00
IUUC-Olo-080857	Oryza longistaminata	38.28	1.00e-73	270.00
IUUC-Ome-081568	Oryza meridionalis	38.05	1.00e-72	267.00
IUUC-Oni-082685	Oryza nivara	38.16	1.00e-76	280.00
IUUC-Opu-084049	Oryza punctata	37.63	2.00e-72	266.00
IUUC-Oru-084348	Oryza rufipogon	38.16	1.00e-76	280.00
IUUC-Osa-086076	Oryza sativa	38.16	1.00e-76	280.00
IUUC-Ola-086991	Oryzias latipes	79.62	0.00e+00	716.00
IUUC-Olu-087891	Ostreococcus lucimarinus	38.59	3.00e-72	265.00
IUUC-Oga-088991	Otolemur garnettii	66.67	2.00e-155	541.00
IUUC-Oar-090430	Ovis aries	67.16	2.00e-159	555.00
IUUC-Ptr-091359	Pan troglodytes	67.23	6.00e-159	553.00
IUUC-Pan-092499	Papio anubis	67.84	3.00e-158	551.00
IUUC-Pma-094447	Petromyzon marinus	57.35	5.00e-123	434.00
IUUC-Pno-095008	Phaeosphaeria nodorum	33.40	2.00e-68	253.00
IUUC-Ppa-095680	Physcomitrella patens	37.25	1.00e-80	293.00
IUUC-Pfo-096430	Poecilia formosa	84.03	0.00e+00	757.00
IUUC-Pab-097649	Pongo abelii	66.99	8.00e-158	550.00
IUUC-Pop-100037	Populus trichocarpa	41.58	2.00e-86	313.00
IUUC-Pca-100317	Procavia capensis	56.67	1.00e-98	353.00
IUUC-Ppe-101999	Prunus persica	41.27	8.00e-85	307.00
IUUC-Pva-103046	Pteropus vampyrus	68.25	3.00e-162	564.00
IUUC-Pgr-103655	Puccinia graminis	31.83	9.00e-60	224.00
IUUC-Ptt-103812	Puccinia triticina	35.71	2.00e-56	213.00
IUUC-Pte-104243	Pyrenophora teres	32.46	2.00e-63	236.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	32.46	2.00e-63	236.00
IUUC-Rno-104973	Rattus norvegicus	66.99	2.00e-160	558.00
IUUC-Sce-106329	Saccharomyces cerevisiae	27.22	3.00e-53	202.00
IUUC-Sha-106941	Sarcophilus harrisii	67.51	5.00e-158	550.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	34.01	2.00e-70	259.00
IUUC-Spo-108329	Schizosaccharomyces pombe	38.34	8.00e-78	284.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	31.22	6.00e-69	254.00
IUUC-Smo-109198	Selaginella moellendorffii	39.64	1.00e-66	246.00
IUUC-Sit-109694	Setaria italica	37.92	9.00e-81	294.00
IUUC-Sly-111294	Solanum lycopersicum	41.97	2.00e-88	319.00
IUUC-Stu-112747	Solanum tuberosum	42.49	1.00e-89	323.00
IUUC-Sar-113315	Sorex araneus	63.57	3.00e-50	192.00
IUUC-Sbi-114694	Sorghum bicolor	38.30	3.00e-81	295.00
IUUC-Sre-114937	Sporisorium reilianum	29.44	4.00e-66	246.00
IUUC-Ssc-116127	Sus scrofa	67.48	9.00e-158	549.00
IUUC-Tgu-117242	Taeniopygia guttata	64.68	7.00e-94	336.00
IUUC-Tni-120368	Tetraodon nigroviridis	94.76	0.00e+00	851.00
IUUC-Tca-121724	Theobroma cacao	38.53	6.00e-81	294.00
IUUC-Tre-122106	Trichoderma reesei	33.62	1.00e-69	257.00
IUUC-Tvi-122526	Trichoderma virens	32.38	6.00e-68	251.00
IUUC-Tae-122939	Triticum aestivum	38.85	1.00e-77	283.00
IUUC-Tur-126548	Triticum urartu	38.58	1.00e-77	283.00
IUUC-Tme-126985	Tuber melanosporum	37.66	6.00e-78	285.00
IUUC-Tbe-127923	Tupaia belangeri	68.18	1.00e-157	549.00
IUUC-Ttr-129308	Tursiops truncatus	64.67	8.00e-145	506.00
IUUC-Uma-129472	Ustilago maydis	27.37	7.00e-59	221.00
IUUC-Vda-129910	Verticillium dahliae	32.58	8.00e-69	254.00
IUUC-Vvi-131683	Vitis vinifera	40.37	1.00e-89	323.00
IUUC-Xtr-132118	Xenopus tropicalis	69.68	4.00e-171	594.00
IUUC-Xma-133804	Xiphophorus maculatus	82.98	0.00e+00	746.00
IUUC-Yli-134639	Yarrowia lipolytica	33.41	2.00e-66	246.00
IUUC-Zma-135779	Zea mays	38.35	3.00e-78	285.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence