iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121402

Ensembl Protein ID

EOY15722

UniProt Accession

A0A061FGB4; A0A061FGB4_THECC

Genbank Protein ID

EOY15722.1

Protein Name

PHD finger transcription factor

Genbank Nucleotide ID

CM001886

Gene Name

TCM_034700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034700	EOY15722	EOY15722

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.10e-09	38.3	299	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
            C vC  gge    l++C++C ++fH++Cl+l+   e+p+ + w+Cp+C+
   Q: 299  LCSVCCYGGE----LICCDRCPSAFHVNCLGLK---EVPDGD-WFCPSCC 340
           6*********....*******************...*****7.******6 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGEKKRSKEV FNAFIHVGSA MIPFEAEFCP EAVVRWYHEG STPGMKSSRQ LSLKAKKHLS 60
AMGWSFWYAP KNGRHELRYK SPNGKVYYSL KTACKSCIDG DGRKEEIRVR VRARAQDLEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATATCTAA AAGAAATTTT CTAACCCAAA AAATGGGGGA AAAAAAAAGA TCTAAAGAAG 60
TTTTCAATGC TTTCATTCAT GTGGGGTATG CTTAACACTG CTACCACTAA GTTAAGGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016181--Acyl_CoA_acyltransferase
IPR000182--GNAT_dom
IPR032308--Jas
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51186--GNAT
PS50016--ZF_PHD_2

Pfam

PF16135--Jas

SMART

SM00249--PHD

Gene Ontology

GO:0008080--F:N-acetyltransferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000983	Aegilops tauschii	37.63	6.00e-99	355.00
IUUC-Atr-002730	Amborella trichopoda	48.06	2.00e-111	396.00
IUUC-Aly-006442	Arabidopsis lyrata	54.65	1.00e-135	476.00
IUUC-Ang-009553	Aspergillus niger	41.38	2.00e-10	60.80
IUUC-Gma-042731	Glycine max	45.48	1.00e-137	483.00
IUUC-Hvu-047053	Hordeum vulgare	35.24	2.00e-53	204.00
IUUC-Lpe-051483	Leersia perrieri	34.13	6.00e-76	278.00
IUUC-Mtr-058466	Medicago truncatula	49.06	7.00e-142	497.00
IUUC-Mac-065186	Musa acuminata	42.66	1.00e-105	377.00
IUUC-Oba-075185	Oryza barthii	35.45	8.00e-89	320.00
IUUC-Ogl-077108	Oryza glaberrima	35.45	1.00e-88	320.00
IUUC-Ogu-078963	Oryza glumaepatula	35.23	2.00e-88	319.00
IUUC-Oin-080086	Oryza indica	33.73	4.00e-71	261.00
IUUC-Olo-080566	Oryza longistaminata	39.51	9.00e-80	290.00
IUUC-Ome-081749	Oryza meridionalis	35.15	7.00e-87	314.00
IUUC-Oru-085037	Oryza rufipogon	35.23	3.00e-87	315.00
IUUC-Pop-099041	Populus trichocarpa	43.78	3.00e-144	505.00
IUUC-Ppe-101593	Prunus persica	47.85	1.00e-159	556.00
IUUC-Sit-109995	Setaria italica	37.54	2.00e-104	373.00
IUUC-Sly-111358	Solanum lycopersicum	47.70	5.00e-150	525.00
IUUC-Stu-112309	Solanum tuberosum	47.80	6.00e-154	537.00
IUUC-Sar-113354	Sorex araneus	37.66	2.00e-11	64.30
IUUC-Sbi-114687	Sorghum bicolor	38.04	2.00e-97	349.00
IUUC-Tae-125660	Triticum aestivum	38.68	3.00e-103	369.00
IUUC-Vvi-130916	Vitis vinifera	56.75	6.00e-138	484.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence