iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002592

Ensembl Protein ID

ERN09203

UniProt Accession

W1PMD8; W1PMD8_AMBTC

Genbank Protein ID

ERN09203.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI393051

Gene Name

AMTR_s00014p00249480

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00014p00249480	ERN09203	ERN09203

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-16	59.3	114	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gH+++v +l+    + + + sGs D+t+++WDlr +v+
   Q: 114  GHKERVVSLCVspiN-DSFMSGSLDHTVRLWDLRVNVC 150
           899999999998765.789**************98776 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MAVVITELDD DIVRSMSIGA VFTDYVGKIS SFDFHRTEDL LVTASEDDSI RLYDIANATV 60
LKTTYNKKHG VDRVCFTHHP SSIICSSRYN LDATSESLRY LSLYDNRCLR NFKGHKERVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGTGG TCATCACAGA GTTGGATGAT GATATTGTGA GAAGCATGTC TATTGGTGCA 60
GTTTTTACAG ATTATGTGAG TTAATACCAT TCTTCTTTTA TTCTCTCTCT TAGAAGAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016571--P:histone methylation
GO:0048586--P:regulation of long-day photoperiodism, flowering
GO:0048510--P:regulation of timing of transition from vegetative to reproductive phase

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001012	Aegilops tauschii	79.00	9.00e-101	358.00
IUUC-Aly-005437	Arabidopsis lyrata	79.71	3.00e-133	466.00
IUUC-Ath-006793	Arabidopsis thaliana	79.71	2.00e-133	467.00
IUUC-Bci-013966	Botrytis cinerea	33.33	1.00e-34	139.00
IUUC-Bdi-015066	Brachypodium distachyon	81.07	1.00e-138	484.00
IUUC-Bol-016019	Brassica oleracea	79.35	4.00e-133	466.00
IUUC-Bra-017871	Brassica rapa	79.35	3.00e-133	466.00
IUUC-Cho-024409	Choloepus hoffmanni	37.93	5.00e-50	189.00
IUUC-Cne-026890	Cryptococcus neoformans	34.27	8.00e-28	116.00
IUUC-Fso-038386	Fusarium solani	34.46	2.00e-33	135.00
IUUC-Gma-044074	Glycine max	80.71	2.00e-141	493.00
IUUC-Hvu-047731	Hordeum vulgare	79.92	5.00e-127	445.00
IUUC-Lpe-050830	Leersia perrieri	81.88	3.00e-138	483.00
IUUC-Mtr-058200	Medicago truncatula	82.14	3.00e-143	499.00
IUUC-Mac-065314	Musa acuminata	84.12	3.00e-145	506.00
IUUC-Oba-075394	Oryza barthii	68.93	6.00e-111	391.00
IUUC-Obr-076456	Oryza brachyantha	81.07	1.00e-138	484.00
IUUC-Ogl-076973	Oryza glaberrima	81.79	2.00e-139	487.00
IUUC-Ogu-078296	Oryza glumaepatula	68.93	8.00e-111	391.00
IUUC-Oin-079656	Oryza indica	81.79	2.00e-139	487.00
IUUC-Olo-080893	Oryza longistaminata	68.57	8.00e-110	388.00
IUUC-Ome-081559	Oryza meridionalis	75.00	4.00e-71	259.00
IUUC-Oni-083104	Oryza nivara	68.93	8.00e-111	391.00
IUUC-Opu-084098	Oryza punctata	65.71	1.00e-102	364.00
IUUC-Oru-084364	Oryza rufipogon	66.55	2.00e-111	394.00
IUUC-Osa-086296	Oryza sativa	81.79	2.00e-139	487.00
IUUC-Pop-099608	Populus trichocarpa	84.78	5.00e-145	505.00
IUUC-Ppe-101452	Prunus persica	82.86	2.00e-144	504.00
IUUC-Pte-104129	Pyrenophora teres	35.59	7.00e-41	161.00
IUUC-Spo-108206	Schizosaccharomyces pombe	39.45	2.00e-39	155.00
IUUC-Smo-109591	Selaginella moellendorffii	70.63	2.00e-111	394.00
IUUC-Sit-109858	Setaria italica	82.08	2.00e-139	487.00
IUUC-Sly-111267	Solanum lycopersicum	76.98	5.00e-133	465.00
IUUC-Sbi-114232	Sorghum bicolor	82.20	4.00e-117	412.00
IUUC-Tca-121853	Theobroma cacao	85.14	4.00e-145	506.00
IUUC-Tre-122205	Trichoderma reesei	34.65	6.00e-39	153.00
IUUC-Tvi-122471	Trichoderma virens	30.69	2.00e-28	118.00
IUUC-Tae-125200	Triticum aestivum	81.43	2.00e-138	483.00
IUUC-Tme-126883	Tuber melanosporum	35.96	2.00e-44	171.00
IUUC-Vvi-131587	Vitis vinifera	86.96	4.00e-148	516.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence