iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Csv-026335

UUCD1 version

UUC-CiS-00243

Ensembl Protein ID

ENSCSAVP00000004559.1

UniProt Accession

H2YGW0; H2YGW0_CIOSA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAVG00000002714.1	ENSCSAVT00000004625.1	ENSCSAVP00000004559.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-32	110.4	79	114
UBD/Beta-Prp	3.70e-49	167.5	118	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+ vt++a  d  +++++s+D ti+vWD+rt  +l
   Q: 79   GHTGTVTSVAV-DaSFIITCSHDSTIRVWDIRTYECL 114
           8*********9.778****************997776 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkgh 93
           +hh+s i+c+ +  +++l++tg+ d+ti v +  +g l++++ gh+a+vta+  +++  ++++g +D+t+  w+++ ++++v ++k+h
   Q: 118  THHSSAIHCMSY--HNKLIITGGVDKTIHVTNSGSGELVKTFVGHKAPVTALVRQHN--LIASGDRDGTVMFWSIEgASEPVESIKAH 201
           69**********..9*************************************99999..9****************999********* PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           ++++ s+++s    +++++s+d+ ++ w+l t +c++ +l+gh   v++v + p  ++l+++s D+ vrlW
   Q: 202  DKQINSIALSG--GRFLTASADKLVKEWELVTMTCVR-ILQGHVNEVTGVLYTP--KYLITSSRDSSVRLW 267
           *********99..************************.****************..*************** PP

Organism

Ciona savignyi

Protein Sequence
(Fasta)

MTIMSHGKRI FSGGMDRKIR MWAPSGESFG KLTQSFKGSI LSMVMGEDEK CRTLYTGSWD 60
TNVLVWDCVT REVKQTITGH TGTVTSVAVD ASFIITCSHD STIRVWDIRT YECLRVITHH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGTCAACA GCGTTGTGAA GCCTGTGCAA AGAGTTAAGT CATTAGAGGT GAGCATAGCA 60
TCTGGTTGGT TGGAGGGCAT CCATCTAAAC CTAAACCCAT GGTTTAATAG TTGAACAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025562	Ciona intestinalis	69.74	8.00e-63	230.00
IUUC-Gma-044355	Glycine max	27.18	5.00e-14	70.50
IUUC-Mtr-058068	Medicago truncatula	27.67	6.00e-15	73.60
IUUC-Oin-079320	Oryza indica	29.95	2.00e-21	95.10
IUUC-Olo-080642	Oryza longistaminata	27.27	3.00e-20	93.20
IUUC-Ome-081921	Oryza meridionalis	30.27	3.00e-20	91.30
IUUC-Oni-082030	Oryza nivara	29.95	3.00e-21	94.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence