iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d020769	Zm00001d020769_T002	Zm00001d020769_T002
Zm00001d020769	Zm00001d020769_T001	Zm00001d020769_T001
Zm00001d020769	Zm00001d020769_T003	Zm00001d020769_T003
Zm00001d020769	Zm00001d020769_T005	Zm00001d020769_T005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	7.50e-74	250.9	322	626

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           +Gl NlgN+CY N++LQcL+++++l+ +lle  +++++     ++++ +++++l+k++ e  k+ k+ vsp+ +l +l+++ ++f + e+
   Q: 322  FGLCNLGNSCYANAILQCLAFTRPLTAYLLEgYHSQNC-----SKTEWCFMCELEKVLIEG-KQGKSPVSPTGILYHLNEIGVSFGQGEE 405
           69*****************************4444444.....45688**********998.99999*********************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgk 179
           +Da+Ef+++ +d+++++           +ee++      ++  ++  ++++l++ +F+g l+s+ikc +c+ +s+  e  ldl++++ g+
   Q: 406  EDAHEFMRYAIDNMQSAS----------MEEAK------KNGIQQLAEETTLVQFIFGGYLRSKIKCTKCQVISKHSERILDLTVEIDGD 479
           ****************99..........22222......33456778999**************************************** PP
   S: 180  eetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspe 269
            +    +l+ +L+ ft+ e l+g+n+y+c++c+++ +a+kkl++ + P++L++ LkR+    + ++  ki+k v+fp++L+ls+++++++
   Q: 480  IS----TLDGALRRFTSSEILDGDNRYHCSRCNSYERAQKKLTILEAPNILTIALKRY----QSGVLGKISKAVKFPEHLNLSQYMCRTD 561
           *6....7***************************************************....558999********************66 PP
   S: 270  ekqkekkkYeLiavvvHsG...slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           ++   +  Y+L+avvvH      + sGHYv+yvk+++gkW ++dD+kV++v+ ++vl+   + aY+l+Y r
   Q: 562  DS---SPVYSLYAVVVHRNvrnATVSGHYVCYVKDSQGKWHEMDDNKVKPVSVQKVLS---RCAYMLLYAR 626
           65...79**********987545679********************************...********87 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MEARNEEVRR LALLAAAEEE TIAREEAYYY GQYGGFVRSS DLPEAPSLWA AQEVPPAPKE 60
VMAEAAAAAA ATVASPTAGK GVCAMCSKPT TLRCKRCKSV KYCTLKCQID HWRNGHKDQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCTCTGAG GCTCTCTGGC CTGCGCGCCG CGCGGCTACT CCCCCCCTCG CGTTTTCACG 60
CCACCCTCTC TGGGCTGGAG AGCCCCGGAA ACGGACGCCG ACGCGCGGCA GCCCCCCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	56.70	4.00e-162	565.00
IUUC-Atr-002920	Amborella trichopoda	58.19	7.00e-127	447.00
IUUC-Aly-006266	Arabidopsis lyrata	50.78	3.00e-111	395.00
IUUC-Ath-007508	Arabidopsis thaliana	54.19	7.00e-112	397.00
IUUC-Bdi-014793	Brachypodium distachyon	53.19	3.00e-171	595.00
IUUC-Bol-015937	Brassica oleracea	54.39	2.00e-109	389.00
IUUC-Bra-018079	Brassica rapa	54.82	1.00e-110	394.00
IUUC-Gma-043905	Glycine max	50.00	8.00e-125	441.00
IUUC-Hvu-047748	Hordeum vulgare	53.66	0.00e+00	711.00
IUUC-Mtr-058629	Medicago truncatula	54.01	1.00e-119	424.00
IUUC-Mac-064908	Musa acuminata	46.99	5.00e-139	488.00
IUUC-Oba-075877	Oryza barthii	53.01	0.00e+00	687.00
IUUC-Obr-076357	Oryza brachyantha	58.70	0.00e+00	679.00
IUUC-Ogl-077565	Oryza glaberrima	48.06	4.00e-176	611.00
IUUC-Ogu-078675	Oryza glumaepatula	52.77	0.00e+00	688.00
IUUC-Oin-079111	Oryza indica	54.90	0.00e+00	738.00
IUUC-Olo-080489	Oryza longistaminata	56.81	5.00e-180	624.00
IUUC-Ome-081510	Oryza meridionalis	52.47	0.00e+00	697.00
IUUC-Oni-082699	Oryza nivara	51.97	0.00e+00	689.00
IUUC-Opu-083249	Oryza punctata	52.98	0.00e+00	717.00
IUUC-Oru-084225	Oryza rufipogon	51.97	0.00e+00	690.00
IUUC-Osa-085422	Oryza sativa	52.71	0.00e+00	697.00
IUUC-Pop-098941	Populus trichocarpa	61.13	3.00e-128	452.00
IUUC-Ppe-101801	Prunus persica	60.50	2.00e-131	463.00
IUUC-Sit-109941	Setaria italica	68.43	0.00e+00	965.00
IUUC-Sly-111806	Solanum lycopersicum	57.97	5.00e-116	412.00
IUUC-Sbi-114354	Sorghum bicolor	78.27	0.00e+00	1173.00
IUUC-Tca-121756	Theobroma cacao	61.83	5.00e-128	452.00
IUUC-Tae-123123	Triticum aestivum	53.40	0.00e+00	716.00
IUUC-Tur-126154	Triticum urartu	53.68	0.00e+00	660.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence