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Tag Content
iUUCD ID IUUC-Bra-017450
Ensembl Protein ID Bra012994.1-P
UniProt Accession M4D934; M4D934_BRARP
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra012994 Bra012994.1 Bra012994.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.50e-23 82.2 111 141
UBD/Beta-Prp 4.20e-53 181.5 110 444
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
    H++ v+c +f sd ++++G+ D +ik++++
   Q: 111 HKSVVRCARFsSDgMFFATGGADTSIKLFEV 141
    9*********9997889************97 PP
   


   UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk. 91
    +hksv++c fs d+ ++atg++d +ik+++v + k +rs+++h +++++++f+p++ ilv++++D+ ik +d+s+ + +++k
   Q: 110 EHKSVVRCARFSSDGMFFATGGADTSIKLFEVPKVKQmlsgdtqarplIRSFYDHAEPINDLDFHPRSTILVSSAKDNCIKFFDFSKTTAKRAFKv 205
    6999****************************9988899***********************************************8888887777 PP
   S: 92 .ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd.s 182
    + +++v+s+sf+psg++l++G+++ + +++d++t+qc+ +++g +g +n v+++++g+++v++s+D+++rl+d ++k++r +++h +
   Q: 206 fQDTHNVRSVSFHPSGEFLLAGTDHAVPHLYDVNTYQCFLPssfPDNGVNGGINQVRYSSTGSVYVTASKDGAIRLFDGVSAKCVRSISSAHGKaE 301
    78*************************************9999*********************************************99886527 PP
   S: 183 vyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght..............................dnvksvrfspnderlvsgssDgsiri 248
    v+s f++++++++s ++d+tvklw++ +g++v++++g + +v++ f + +e+++s +g +
   Q: 302 VTSAVFTRDQRFVLSSGKDSTVKLWEIASGRMVKEYIGAKrlklrsqvmfslsnfseqlgpayserssllLWVTQAIFNDTEEFVISID-EGNNEV 396
    99999**************************************************************************9999999996.555554 PP
   S: 249 ..Wdlrsgdllktlqlhnssvisvavlsfgdnvlvlgse.dskvniwk 293
    Wd r+ + + + ++ v +s+ ++v+v+++ d +v++wk
   Q: 397 vtWDARTAEKVAKWPSNHNGVPRWIEHSPVEPVFVTCGTtDRSVRFWK 444
    55***********99999999998889**********999*******9 PP
   

Organism Brassica rapa
Protein Sequence
(Fasta)
MEISGSLEQA LQEGNILRQL NALIVASDVA SATMTPLNVE VSPNRLLELV SKGLAAENNG 60
SLRGVSSSVL LPTSYGSVAN PRTASIDFSA THVKGSSKAL PKHESKQLSE HKSVVRCARF 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Bra-017450|E3,WD_repeat;UBD,Beta-Prp|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAGATTA GTGGCAGTTT AGAGCAAGCT CTGCAAGAGG GAAACATCTT GAGACAGCTC 60
AATGCCCTCA TCGTGGCTCA TCTCCGTCAC CACAATCTCT CACAGGCATG TCTCCTCTAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Bra-017450|E3,WD_repeat;UBD,Beta-Prp|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002163 Ailuropoda melanoleuca 36.49 9.00e-76 276.00
IUUC-Atr-002687 Amborella trichopoda 55.58 1.00e-147 516.00
IUUC-Apl-003438 Anas platyrhynchos 36.49 2.00e-76 278.00
IUUC-Aca-005178 Anolis carolinensis 36.90 3.00e-76 278.00
IUUC-Aly-005791 Arabidopsis lyrata 80.79 0.00e+00 753.00
IUUC-Ath-006689 Arabidopsis thaliana 81.00 0.00e+00 731.00
IUUC-Ame-011217 Astyanax mexicanus 43.34 7.00e-66 243.00
IUUC-Bta-012619 Bos taurus 36.49 9.00e-76 276.00
IUUC-Bdi-014515 Brachypodium distachyon 53.32 5.00e-140 490.00
IUUC-Cel-018151 Caenorhabditis elegans 36.57 7.00e-65 241.00
IUUC-Cja-019304 Callithrix jacchus 36.73 3.00e-76 278.00
IUUC-Cfa-020208 Canis familiaris 36.49 9.00e-76 276.00
IUUC-Cpo-022245 Cavia porcellus 36.49 9.00e-76 276.00
IUUC-Csa-023066 Chlorocebus sabaeus 36.73 3.00e-76 278.00
IUUC-Cho-024770 Choloepus hoffmanni 39.19 3.00e-74 271.00
IUUC-Cin-025621 Ciona intestinalis 33.33 2.00e-64 239.00
IUUC-Csv-026071 Ciona savignyi 36.98 5.00e-72 264.00
IUUC-Dre-028254 Danio rerio 36.57 3.00e-74 271.00
IUUC-Dno-029903 Dasypus novemcinctus 36.49 9.00e-76 276.00
IUUC-Dor-030423 Dipodomys ordii 36.67 1.00e-75 276.00
IUUC-Dme-031993 Drosophila melanogaster 36.49 2.00e-68 253.00
IUUC-Eca-033316 Equus caballus 36.49 9.00e-76 276.00
IUUC-Eeu-035001 Erinaceus europaeus 37.20 7.00e-75 274.00
IUUC-Fca-036447 Felis catus 36.49 9.00e-76 276.00
IUUC-Fal-037601 Ficedula albicollis 36.49 2.00e-76 278.00
IUUC-Gmo-038531 Gadus morhua 36.73 5.00e-70 258.00
IUUC-Gga-040869 Gallus gallus 36.26 2.00e-76 278.00
IUUC-Gac-042380 Gasterosteus aculeatus 37.73 1.00e-74 273.00
IUUC-Gma-043478 Glycine max 61.27 1.00e-165 575.00
IUUC-Ggo-045302 Gorilla gorilla 36.73 3.00e-76 278.00
IUUC-Hsa-045678 Homo sapiens 36.73 3.00e-76 278.00
IUUC-Hvu-047301 Hordeum vulgare 55.07 1.00e-135 475.00
IUUC-Itr-048259 Ictidomys tridecemlineatus 36.49 9.00e-76 276.00
IUUC-Lch-050319 Latimeria chalumnae 36.98 2.00e-74 272.00
IUUC-Lpe-051440 Leersia perrieri 43.78 4.00e-117 414.00
IUUC-Loc-052035 Lepisosteus oculatus 38.22 1.00e-75 276.00
IUUC-Laf-054275 Loxodonta africana 36.49 9.00e-76 276.00
IUUC-Mcc-055857 Macaca mulatta 31.98 3.00e-56 211.00
IUUC-Mtr-058667 Medicago truncatula 57.88 2.00e-153 535.00
IUUC-Mga-059710 Meleagris gallopavo 36.26 2.00e-76 278.00
IUUC-Mmr-060604 Microcebus murinus 36.49 9.00e-76 276.00
IUUC-Mdo-062953 Monodelphis domestica 36.49 8.00e-76 276.00
IUUC-Mmu-064292 Mus musculus 36.26 1.00e-75 276.00
IUUC-Mac-064568 Musa acuminata 62.46 3.00e-133 467.00
IUUC-Mpu-066294 Mustela putorius furo 41.35 1.00e-49 190.00
IUUC-Mlu-067279 Myotis lucifugus 35.75 7.00e-76 277.00
IUUC-Nle-069322 Nomascus leucogenys 36.73 3.00e-76 278.00
IUUC-Opr-070580 Ochotona princeps 36.49 1.00e-75 276.00
IUUC-Ont-072554 Oreochromis niloticus 37.98 2.00e-75 275.00
IUUC-Oan-072856 Ornithorhynchus anatinus 36.26 2.00e-75 275.00
IUUC-Ocu-074150 Oryctolagus cuniculus 35.80 3.00e-62 231.00
IUUC-Oba-075585 Oryza barthii 49.70 3.00e-127 448.00
IUUC-Obr-076069 Oryza brachyantha 52.47 2.00e-134 471.00
IUUC-Ogl-077045 Oryza glaberrima 54.45 1.00e-141 496.00
IUUC-Ogu-078697 Oryza glumaepatula 53.81 2.00e-134 473.00
IUUC-Oin-080119 Oryza indica 54.45 1.00e-141 496.00
IUUC-Olo-081093 Oryza longistaminata 40.46 1.00e-83 305.00
IUUC-Ome-081718 Oryza meridionalis 45.97 1.00e-107 384.00
IUUC-Oni-082072 Oryza nivara 49.70 3.00e-127 448.00
IUUC-Opu-084080 Oryza punctata 46.60 5.00e-107 380.00
IUUC-Oru-085070 Oryza rufipogon 50.84 5.00e-126 445.00
IUUC-Osa-086149 Oryza sativa 54.45 1.00e-141 496.00
IUUC-Ola-086697 Oryzias latipes 37.38 4.00e-75 274.00
IUUC-Oga-088697 Otolemur garnettii 36.49 9.00e-76 276.00
IUUC-Oar-089774 Ovis aries 36.49 1.00e-75 276.00
IUUC-Ptr-090924 Pan troglodytes 36.73 3.00e-76 278.00
IUUC-Pan-092373 Papio anubis 36.97 4.00e-76 278.00
IUUC-Psi-094001 Pelodiscus sinensis 36.73 7.00e-76 277.00
IUUC-Pma-094274 Petromyzon marinus 35.14 4.00e-70 258.00
IUUC-Ppa-095562 Physcomitrella patens 52.99 7.00e-138 483.00
IUUC-Pfo-097235 Poecilia formosa 37.74 5.00e-75 274.00
IUUC-Pab-098608 Pongo abelii 36.73 3.00e-76 278.00
IUUC-Pca-100268 Procavia capensis 36.49 9.00e-76 276.00
IUUC-Ppe-101425 Prunus persica 61.08 4.00e-163 567.00
IUUC-Pva-103183 Pteropus vampyrus 36.49 9.00e-76 276.00
IUUC-Rno-105097 Rattus norvegicus 36.26 1.00e-75 276.00
IUUC-Sha-107642 Sarcophilus harrisii 36.49 8.00e-76 276.00
IUUC-Smo-108680 Selaginella moellendorffii 52.89 8.00e-129 453.00
IUUC-Sit-110471 Setaria italica 56.86 2.00e-145 509.00
IUUC-Sly-111143 Solanum lycopersicum 58.68 2.00e-79 288.00
IUUC-Stu-111926 Solanum tuberosum 59.69 4.00e-64 236.00
IUUC-Sar-112947 Sorex araneus 42.05 2.00e-60 225.00
IUUC-Sbi-113769 Sorghum bicolor 56.02 2.00e-139 488.00
IUUC-Ssc-115736 Sus scrofa 36.49 9.00e-76 276.00
IUUC-Tgu-117457 Taeniopygia guttata 36.49 2.00e-76 278.00
IUUC-Tru-117760 Takifugu rubripes 38.22 7.00e-76 277.00
IUUC-Tsy-118943 Tarsius syrichta 35.78 1.00e-71 263.00
IUUC-Tni-120081 Tetraodon nigroviridis 37.50 2.00e-75 275.00
IUUC-Tca-121190 Theobroma cacao 63.83 3.00e-169 587.00
IUUC-Tae-123709 Triticum aestivum 55.31 9.00e-139 486.00
IUUC-Tur-126329 Triticum urartu 52.97 8.00e-132 464.00
IUUC-Tbe-127878 Tupaia belangeri 36.73 5.00e-75 274.00
IUUC-Ttr-128985 Tursiops truncatus 36.49 9.00e-76 276.00
IUUC-Vpa-130147 Vicugna pacos 36.49 1.00e-75 276.00
IUUC-Vvi-130935 Vitis vinifera 59.31 2.00e-161 561.00
IUUC-Xtr-132482 Xenopus tropicalis 35.49 3.00e-76 278.00
IUUC-Xma-133929 Xiphophorus maculatus 37.74 5.00e-75 274.00
Created Date 25-Jun-2017

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