iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017597

Ensembl Protein ID

Bra027470.1-P

UniProt Accession

M4EFA8; M4EFA8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027470	Bra027470.1	Bra027470.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.20e-33	114.7	19	158

Active Site

Position(s)	Description	Evidence
112	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk..............ifhPnvyenGkvC 82
           Rl+kel+e++ +pp+g++ k++d+  l++w ++++G ++t Y+++++kl+++fpe+YP+++P+ +fl +               +hP++y+nG++C
   Q: 19   RLQKELSEWQVNPPTGFKHKVTDN--LQKWIIEVTGAPGTLYANETYKLQVDFPEHYPMESPQATFLISffgiyifvifvppaPLHPHIYSNGHIC 112
           9****************9998887..*******************************************9*******99999999*********** PP
   S: 83   lsilkeeekWspalsvesvllsiqsll.aepnpesplneeaaellkkn 129
           l+il   + Wspa++v+sv++si s+l ++p+ + p++++ + + +kn
   Q: 113  LDILY--DSWSPAMTVSSVCISILSMLsSSPEKQRPADNDRYVKNCKN 158
           ****9..********************667*******99988555444 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTSSSSPSRK ALSKIACNRL QKELSEWQVN PPTGFKHKVT DNLQKWIIEV TGAPGTLYAN 60
ETYKLQVDFP EHYPMESPQA TFLISFFGIY IFVIFVPPAP LHPHIYSNGH ICLDILYDSW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCAGCT CTTCATCTCC TTCACGCAAG GTCTCTCTTT GATTTCGTAT TCTTCGATTT 60
TGGATGTCAA TTTTGTTTGT TTTTTTTGGG AGTTTTTGAT ATTTAGAAAA AAATGGTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0472--Membrane
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005524--F:ATP binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000363	Aegilops tauschii	70.69	5.00e-70	257.00
IUUC-Atr-002673	Amborella trichopoda	87.01	9.00e-38	149.00
IUUC-Aly-006450	Arabidopsis lyrata	87.93	2.00e-79	286.00
IUUC-Ath-006737	Arabidopsis thaliana	87.93	2.00e-79	286.00
IUUC-Oba-075077	Oryza barthii	83.24	2.00e-75	273.00
IUUC-Obr-076142	Oryza brachyantha	79.19	3.00e-74	270.00
IUUC-Ogl-077944	Oryza glaberrima	82.76	3.00e-75	273.00
IUUC-Ogu-078453	Oryza glumaepatula	83.24	2.00e-75	273.00
IUUC-Olo-080356	Oryza longistaminata	82.76	3.00e-75	273.00
IUUC-Ome-081601	Oryza meridionalis	82.76	3.00e-75	273.00
IUUC-Oni-082554	Oryza nivara	83.24	2.00e-75	273.00
IUUC-Opu-083614	Oryza punctata	83.24	1.00e-75	274.00
IUUC-Oru-085028	Oryza rufipogon	82.76	3.00e-75	273.00
IUUC-Osa-085386	Oryza sativa	82.76	3.00e-75	273.00
IUUC-Sit-110080	Setaria italica	82.56	2.00e-74	270.00
IUUC-Sbi-114650	Sorghum bicolor	83.14	5.00e-75	272.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence