iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014221

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000884

Gene Name

LOC100845248; BRADI_5g05967

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G05967	BRADI5G05967.1	BRADI5G05967.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.50e-29	101.2	71	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vpe+flCpIs ++M dPvv++sG+tydr  Ie+w++ g++tcP  +q l +++l+Pnl +r++i +wc +n+
   Q: 71   VPEQFLCPISSKIMGDPVVVESGQTYDRHFIEEWFSAGNQTCPQSQQVLLNKTLIPNLLIRSMIAQWCTQNG 142
           8*********************************************************************97 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MVKPPPAEED TAALRRRLRS LVTALTGEGA VADAFDEAAA ALAALREAEL SGRGKGARRE 60
DMRTVVEAEA VPEQFLCPIS SKIMGDPVVV ESGQTYDRHF IEEWFSAGNQ TCPQSQQVLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAAGC CGCCGCCGGC GGAGGAGGAT ACTGCGGCGC TGCGGCGGCG CCTTAGGAGT 60
CTCGTTACGG CACTGACCGG TGAAGGTGCC GTAGCGGACG CGTTCGATGA GGCGGCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000164	Aegilops tauschii	77.88	0.00e+00	629.00
IUUC-Hvu-047411	Hordeum vulgare	85.83	4.00e-173	599.00
IUUC-Lpe-050834	Leersia perrieri	75.19	5.00e-166	576.00
IUUC-Oba-075034	Oryza barthii	76.00	1.00e-162	564.00
IUUC-Obr-076600	Oryza brachyantha	70.74	2.00e-163	567.00
IUUC-Ogu-078748	Oryza glumaepatula	75.97	1.00e-167	582.00
IUUC-Oin-079903	Oryza indica	75.97	1.00e-167	582.00
IUUC-Olo-080593	Oryza longistaminata	75.20	1.00e-156	545.00
IUUC-Ome-081609	Oryza meridionalis	76.36	8.00e-168	582.00
IUUC-Oni-082804	Oryza nivara	75.97	1.00e-167	582.00
IUUC-Opu-083982	Oryza punctata	76.29	3.00e-168	583.00
IUUC-Oru-084664	Oryza rufipogon	75.45	3.00e-167	580.00
IUUC-Osa-085792	Oryza sativa	75.45	3.00e-167	580.00
IUUC-Sit-110255	Setaria italica	74.74	3.00e-176	610.00
IUUC-Tae-123657	Triticum aestivum	85.33	0.00e+00	653.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence