iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017090

Ensembl Protein ID

Bra039167.1-P

UniProt Accession

M4FDJ6; M4FDJ6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra039167	Bra039167.1	Bra039167.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	31.51	0.00e+00	857.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MADDLANLCR FLFDETGLTS STSSSDLFSQ RIRSDDSIKR GLRYFYLLLR SGIAPIGGDG 60
DSSSVKLRFE TWSDSQLQAL VSISQAILLL SRSLLVDQVE PIVLGVIQEV MEFSLSFLEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGATG ACTTGGCGAA TCTCTGCCGA TTTCTCTTCG ACGAGACCGG CCTCACCTCG 60
TCGACGTCGT CGTCAGATCT CTTTTCGCAA CGCATACGCT CCGATGATTC GATCAAGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR015943--WD40/YVTN_repeat-like_dom
IPR003126--Znf_UBR
IPR000433--Znf_ZZ

PROSITE

PS51157--ZF_UBR
PS01357--ZF_ZZ_1
PS50135--ZF_ZZ_2

Pfam

PF13764--E3_UbLigase_R4
PF00569--ZZ

SMART

SM00396--ZnF_UBR1
SM00291--ZnF_ZZ

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0009506--C:plasmodesma
GO:0008270--F:zinc ion binding
GO:0009926--P:auxin polar transport
GO:0048281--P:inflorescence morphogenesis
GO:0010311--P:lateral root formation
GO:0009640--P:photomorphogenesis
GO:0009733--P:response to auxin
GO:0009620--P:response to fungus
GO:0009826--P:unidimensional cell growth

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000915	Aegilops tauschii	57.04	0.00e+00	4995.00
IUUC-Aml-001346	Ailuropoda melanoleuca	33.70	0.00e+00	821.00
IUUC-Atr-002587	Amborella trichopoda	55.64	0.00e+00	4109.00
IUUC-Apl-003678	Anas platyrhynchos	33.52	0.00e+00	814.00
IUUC-Aca-004517	Anolis carolinensis	39.87	3.00e-94	338.00
IUUC-Aly-006117	Arabidopsis lyrata	90.25	0.00e+00	8329.00
IUUC-Ath-007289	Arabidopsis thaliana	90.17	0.00e+00	8266.00
IUUC-Ame-011965	Astyanax mexicanus	29.46	7.00e-81	297.00
IUUC-Bta-012498	Bos taurus	33.52	0.00e+00	810.00
IUUC-Bci-013659	Botrytis cinerea	41.38	2.00e-06	47.80
IUUC-Bdi-014555	Brachypodium distachyon	57.88	0.00e+00	4926.00
IUUC-Bol-015522	Brassica oleracea	98.63	0.00e+00	9235.00
IUUC-Cel-018504	Caenorhabditis elegans	25.43	2.00e-41	166.00
IUUC-Cja-018983	Callithrix jacchus	33.98	0.00e+00	822.00
IUUC-Cfa-020612	Canis familiaris	33.70	0.00e+00	819.00
IUUC-Cpo-021700	Cavia porcellus	33.64	0.00e+00	821.00
IUUC-Csa-023771	Chlorocebus sabaeus	33.98	0.00e+00	823.00
IUUC-Cho-024474	Choloepus hoffmanni	38.29	2.00e-108	389.00
IUUC-Cin-025247	Ciona intestinalis	31.31	4.00e-77	282.00
IUUC-Csv-026255	Ciona savignyi	30.14	6.00e-79	288.00
IUUC-Cne-027045	Cryptococcus neoformans	34.33	2.00e-04	42.00
IUUC-Dre-028796	Danio rerio	31.59	0.00e+00	899.00
IUUC-Dno-030056	Dasypus novemcinctus	33.52	0.00e+00	813.00
IUUC-Dor-030711	Dipodomys ordii	34.74	0.00e+00	655.00
IUUC-Dme-032113	Drosophila melanogaster	30.74	0.00e+00	779.00
IUUC-Ete-032334	Echinops telfairi	33.76	0.00e+00	820.00
IUUC-Eca-033327	Equus caballus	33.70	0.00e+00	818.00
IUUC-Eeu-034698	Erinaceus europaeus	29.35	1.00e-61	233.00
IUUC-Fca-035430	Felis catus	33.21	0.00e+00	799.00
IUUC-Fal-037566	Ficedula albicollis	33.58	0.00e+00	819.00
IUUC-Gmo-038674	Gadus morhua	33.29	0.00e+00	801.00
IUUC-Gga-040641	Gallus gallus	33.37	0.00e+00	825.00
IUUC-Gac-041870	Gasterosteus aculeatus	31.36	0.00e+00	911.00
IUUC-Gma-042722	Glycine max	65.44	0.00e+00	5799.00
IUUC-Ggo-045360	Gorilla gorilla	33.98	0.00e+00	821.00
IUUC-Hsa-046955	Homo sapiens	33.98	0.00e+00	822.00
IUUC-Hvu-047255	Hordeum vulgare	57.30	0.00e+00	4985.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	28.75	5.00e-87	317.00
IUUC-Lch-049893	Latimeria chalumnae	32.50	0.00e+00	772.00
IUUC-Lpe-050948	Leersia perrieri	56.70	0.00e+00	4855.00
IUUC-Loc-052019	Lepisosteus oculatus	30.42	0.00e+00	760.00
IUUC-Laf-054238	Loxodonta africana	33.70	0.00e+00	817.00
IUUC-Mcc-054905	Macaca mulatta	33.98	0.00e+00	820.00
IUUC-Meu-056297	Macropus eugenii	31.41	0.00e+00	737.00
IUUC-Mtr-058169	Medicago truncatula	64.90	0.00e+00	5928.00
IUUC-Mga-059621	Meleagris gallopavo	33.37	0.00e+00	824.00
IUUC-Mmr-061395	Microcebus murinus	33.71	0.00e+00	793.00
IUUC-Mdo-063037	Monodelphis domestica	33.58	0.00e+00	830.00
IUUC-Mmu-063200	Mus musculus	33.56	0.00e+00	816.00
IUUC-Mac-065267	Musa acuminata	63.93	0.00e+00	3627.00
IUUC-Mpu-066639	Mustela putorius furo	33.58	0.00e+00	817.00
IUUC-Mlu-067172	Myotis lucifugus	33.80	0.00e+00	819.00
IUUC-Nle-069162	Nomascus leucogenys	33.92	0.00e+00	823.00
IUUC-Opr-070567	Ochotona princeps	33.51	1.00e-149	526.00
IUUC-Ont-072364	Oreochromis niloticus	33.62	0.00e+00	810.00
IUUC-Oan-072804	Ornithorhynchus anatinus	31.65	6.00e-140	491.00
IUUC-Ocu-074637	Oryctolagus cuniculus	33.80	0.00e+00	817.00
IUUC-Oba-075215	Oryza barthii	56.72	0.00e+00	4888.00
IUUC-Obr-076704	Oryza brachyantha	57.25	0.00e+00	4955.00
IUUC-Ogl-077593	Oryza glaberrima	55.50	0.00e+00	4183.00
IUUC-Ogu-078732	Oryza glumaepatula	56.73	0.00e+00	4897.00
IUUC-Oin-079805	Oryza indica	74.78	0.00e+00	2131.00
IUUC-Olo-080261	Oryza longistaminata	57.11	0.00e+00	4925.00
IUUC-Ome-081392	Oryza meridionalis	56.95	0.00e+00	4903.00
IUUC-Oni-082086	Oryza nivara	56.79	0.00e+00	4908.00
IUUC-Opu-083535	Oryza punctata	57.32	0.00e+00	4960.00
IUUC-Oru-084735	Oryza rufipogon	56.78	0.00e+00	4908.00
IUUC-Ola-086799	Oryzias latipes	31.92	0.00e+00	881.00
IUUC-Olu-087777	Ostreococcus lucimarinus	34.55	4.00e-95	344.00
IUUC-Oga-088126	Otolemur garnettii	33.54	6.00e-71	261.00
IUUC-Oar-090428	Ovis aries	33.56	0.00e+00	823.00
IUUC-Ptr-091407	Pan troglodytes	33.98	0.00e+00	822.00
IUUC-Pan-091777	Papio anubis	32.69	0.00e+00	898.00
IUUC-Psi-093587	Pelodiscus sinensis	32.82	0.00e+00	793.00
IUUC-Pma-094248	Petromyzon marinus	36.59	2.00e-10	61.20
IUUC-Ppa-095781	Physcomitrella patens	48.85	0.00e+00	3922.00
IUUC-Pfo-097449	Poecilia formosa	33.48	0.00e+00	815.00
IUUC-Pab-098450	Pongo abelii	33.98	0.00e+00	822.00
IUUC-Pop-100041	Populus trichocarpa	68.65	0.00e+00	6081.00
IUUC-Pca-100663	Procavia capensis	28.79	6.00e-101	364.00
IUUC-Ppe-101386	Prunus persica	68.07	0.00e+00	6082.00
IUUC-Pva-102701	Pteropus vampyrus	32.11	0.00e+00	737.00
IUUC-Rno-105367	Rattus norvegicus	33.62	0.00e+00	819.00
IUUC-Sha-107490	Sarcophilus harrisii	33.64	0.00e+00	830.00
IUUC-Sja-108012	Schizosaccharomyces japonicus	55.17	6.00e-06	44.70
IUUC-Ssl-108622	Sclerotinia sclerotiorum	41.38	3.00e-06	47.40
IUUC-Smo-109103	Selaginella moellendorffii	54.34	0.00e+00	3699.00
IUUC-Sit-110670	Setaria italica	57.92	0.00e+00	4901.00
IUUC-Sly-110952	Solanum lycopersicum	62.82	0.00e+00	5641.00
IUUC-Stu-112624	Solanum tuberosum	73.29	0.00e+00	2153.00
IUUC-Sar-113180	Sorex araneus	32.92	6.00e-121	431.00
IUUC-Sbi-114596	Sorghum bicolor	57.67	0.00e+00	4852.00
IUUC-Ssc-115377	Sus scrofa	33.84	0.00e+00	793.00
IUUC-Tgu-117330	Taeniopygia guttata	33.50	0.00e+00	824.00
IUUC-Tru-117635	Takifugu rubripes	33.48	0.00e+00	800.00
IUUC-Tsy-119551	Tarsius syrichta	34.67	4.00e-123	437.00
IUUC-Tni-119727	Tetraodon nigroviridis	33.52	0.00e+00	804.00
IUUC-Tca-121017	Theobroma cacao	69.70	0.00e+00	6355.00
IUUC-Tae-122892	Triticum aestivum	76.92	2.00e-54	206.00
IUUC-Tur-126292	Triticum urartu	56.97	0.00e+00	4984.00
IUUC-Tbe-127560	Tupaia belangeri	40.30	7.00e-11	62.40
IUUC-Ttr-128332	Tursiops truncatus	33.60	3.00e-136	481.00
IUUC-Vpa-130615	Vicugna pacos	25.04	3.00e-44	176.00
IUUC-Vvi-131435	Vitis vinifera	67.58	0.00e+00	5978.00
IUUC-Xtr-132130	Xenopus tropicalis	30.83	2.00e-151	531.00
IUUC-Xma-133859	Xiphophorus maculatus	33.29	0.00e+00	814.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence