iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037343

Ensembl Protein ID

ENSFALP00000007889.1

UniProt Accession

U3JYN5; U3JYN5_FICAL

Genbank Protein ID

ENSFALP00000007889

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000148

Gene Name

ERCC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000007563.1	ENSFALT00000007922.1	ENSFALP00000007889.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	61.00	0.00e+00	1674.00	IUUC-Hsa-046895
UBD/Alpha-Helix/UBA	61.00	0.00e+00	1674.00	IUUC-Hsa-046895

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MPTHKSLLPD SAQEQESATT SSNDCLHNDE NSGTEQENGI CDNGVGNSVG IPNSDCQAST 60
SMAVPLEAPR RTHPLLQINR QQIQSVSCSA HAAELKDLGV DVYDQDVLEQ GVLQQVDNAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC 60
CCCCCCCCCC CCCCCCGGCC CGGCGCCCCC CGGAGCCCCG CACGTCCCGT CGCAGCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005829--C:cytosol
GO:0005794--C:Golgi apparatus
GO:0005730--C:nucleolus
GO:0008023--C:transcription elongation factor complex
GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0003677--F:DNA binding
GO:0008094--F:DNA-dependent ATPase activity
GO:0030296--F:protein tyrosine kinase activator activity
GO:0007256--P:activation of JNKK activity
GO:0007257--P:activation of JUN kinase activity
GO:0006284--P:base-excision repair
GO:0008630--P:intrinsic apoptotic signaling pathway in response to DNA damage
GO:0035264--P:multicellular organism growth
GO:0045494--P:photoreceptor cell maintenance
GO:0032786--P:positive regulation of DNA-templated transcription, elongation
GO:0006290--P:pyrimidine dimer repair
GO:0010332--P:response to gamma radiation
GO:0000303--P:response to superoxide
GO:0009636--P:response to toxic substance
GO:0010224--P:response to UV-B
GO:0010165--P:response to X-ray
GO:0006362--P:transcription elongation from RNA polymerase I promoter
GO:0006283--P:transcription-coupled nucleotide-excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000518	Aegilops tauschii	51.79	0.00e+00	648.00
IUUC-Aml-002021	Ailuropoda melanoleuca	61.62	0.00e+00	1649.00
IUUC-Atr-002868	Amborella trichopoda	52.55	0.00e+00	632.00
IUUC-Apl-003989	Anas platyrhynchos	80.92	0.00e+00	2268.00
IUUC-Aca-004609	Anolis carolinensis	60.87	0.00e+00	1581.00
IUUC-Aly-005912	Arabidopsis lyrata	49.44	0.00e+00	630.00
IUUC-Ath-006812	Arabidopsis thaliana	49.44	0.00e+00	632.00
IUUC-Ago-007719	Ashbya gossypii	49.44	8.00e-179	620.00
IUUC-Acl-008050	Aspergillus clavatus	50.24	7.00e-176	611.00
IUUC-Afl-008677	Aspergillus flavus	50.84	4.00e-170	592.00
IUUC-Afu-008975	Aspergillus fumigatus	50.00	2.00e-177	616.00
IUUC-Ani-009464	Aspergillus nidulans	53.45	4.00e-178	619.00
IUUC-Ang-009516	Aspergillus niger	53.33	6.00e-167	581.00
IUUC-Aor-010057	Aspergillus oryzae	48.64	3.00e-173	602.00
IUUC-Ate-010307	Aspergillus terreus	49.54	2.00e-170	593.00
IUUC-Ame-011055	Astyanax mexicanus	66.63	0.00e+00	1264.00
IUUC-Bgr-012211	Blumeria graminis	48.25	1.00e-167	584.00
IUUC-Bta-012761	Bos taurus	60.92	0.00e+00	1262.00
IUUC-Bci-013603	Botrytis cinerea	50.80	0.00e+00	634.00
IUUC-Bdi-014031	Brachypodium distachyon	48.19	0.00e+00	647.00
IUUC-Bol-015096	Brassica oleracea	52.32	0.00e+00	637.00
IUUC-Bra-017583	Brassica rapa	51.99	0.00e+00	634.00
IUUC-Cel-018275	Caenorhabditis elegans	36.14	9.00e-108	384.00
IUUC-Cja-019733	Callithrix jacchus	67.29	0.00e+00	1345.00
IUUC-Cfa-020631	Canis familiaris	62.50	0.00e+00	1652.00
IUUC-Cpo-022218	Cavia porcellus	81.09	0.00e+00	1024.00
IUUC-Cre-022710	Chlamydomonas reinhardtii	50.09	2.00e-157	550.00
IUUC-Csa-023723	Chlorocebus sabaeus	62.57	0.00e+00	1656.00
IUUC-Cho-024312	Choloepus hoffmanni	57.41	0.00e+00	636.00
IUUC-Cin-025376	Ciona intestinalis	65.98	0.00e+00	770.00
IUUC-Cgl-026654	Colletotrichum gloeosporioides	47.28	7.00e-160	558.00
IUUC-Cme-027109	Cyanidioschyzon merolae	52.87	5.00e-160	558.00
IUUC-Dre-028672	Danio rerio	63.25	0.00e+00	1235.00
IUUC-Dno-028893	Dasypus novemcinctus	63.38	0.00e+00	1583.00
IUUC-Dor-031114	Dipodomys ordii	60.25	0.00e+00	1120.00
IUUC-Dse-031225	Dothistroma septosporum	46.73	0.00e+00	635.00
IUUC-Ete-032713	Echinops telfairi	56.40	0.00e+00	721.00
IUUC-Eca-034071	Equus caballus	62.11	0.00e+00	1637.00
IUUC-Eeu-034781	Erinaceus europaeus	63.68	0.00e+00	1343.00
IUUC-Fca-036561	Felis catus	71.62	0.00e+00	1333.00
IUUC-Fox-037667	Fusarium oxysporum	47.49	3.00e-155	542.00
IUUC-Fso-038331	Fusarium solani	50.89	2.00e-161	563.00
IUUC-Gmo-039132	Gadus morhua	63.30	0.00e+00	1177.00
IUUC-Gga-040376	Gallus gallus	79.55	0.00e+00	2243.00
IUUC-Gac-042326	Gasterosteus aculeatus	77.36	0.00e+00	953.00
IUUC-Gma-043401	Glycine max	51.90	0.00e+00	633.00
IUUC-Ggo-044844	Gorilla gorilla	62.29	0.00e+00	1650.00
IUUC-Hsa-046895	Homo sapiens	62.15	0.00e+00	1649.00
IUUC-Itr-048071	Ictidomys tridecemlineatus	62.28	0.00e+00	1640.00
IUUC-Kpa-049261	Komagataella pastoris	49.24	0.00e+00	657.00
IUUC-Lch-049934	Latimeria chalumnae	67.36	0.00e+00	1176.00
IUUC-Lpe-051249	Leersia perrieri	45.09	2.00e-151	529.00
IUUC-Loc-052591	Lepisosteus oculatus	70.76	0.00e+00	1269.00
IUUC-Lma-053210	Leptosphaeria maculans	50.64	3.00e-169	589.00
IUUC-Laf-054403	Loxodonta africana	63.33	0.00e+00	1636.00
IUUC-Mcc-054876	Macaca mulatta	62.01	0.00e+00	1655.00
IUUC-Meu-056545	Macropus eugenii	59.31	6.00e-110	392.00
IUUC-Mor-057145	Magnaporthe oryzae	47.47	2.00e-175	609.00
IUUC-Mpo-057493	Magnaporthe poae	48.86	9.00e-170	590.00
IUUC-Mtr-057734	Medicago truncatula	49.04	0.00e+00	632.00
IUUC-Mga-059402	Meleagris gallopavo	79.03	0.00e+00	2212.00
IUUC-Mmr-061791	Microcebus murinus	62.16	0.00e+00	1662.00
IUUC-Mdo-062148	Monodelphis domestica	63.38	0.00e+00	1653.00
IUUC-Mmu-063238	Mus musculus	60.77	0.00e+00	1627.00
IUUC-Mac-064440	Musa acuminata	51.15	6.00e-176	611.00
IUUC-Mpu-066112	Mustela putorius furo	65.56	0.00e+00	1376.00
IUUC-Mlu-067057	Myotis lucifugus	61.84	0.00e+00	1637.00
IUUC-Nfi-068617	Neosartorya fischeri	50.48	6.00e-177	614.00
IUUC-Ncr-068920	Neurospora crassa	46.56	7.00e-177	614.00
IUUC-Nle-069992	Nomascus leucogenys	62.33	0.00e+00	1645.00
IUUC-Opr-070929	Ochotona princeps	60.59	0.00e+00	1428.00
IUUC-Ont-071740	Oreochromis niloticus	74.68	0.00e+00	1012.00
IUUC-Oan-073380	Ornithorhynchus anatinus	63.95	0.00e+00	775.00
IUUC-Ocu-074143	Oryctolagus cuniculus	63.45	0.00e+00	1259.00
IUUC-Oba-075626	Oryza barthii	48.60	0.00e+00	634.00
IUUC-Obr-076240	Oryza brachyantha	47.97	0.00e+00	657.00
IUUC-Ogl-077187	Oryza glaberrima	48.60	0.00e+00	634.00
IUUC-Ogu-078629	Oryza glumaepatula	45.96	5.00e-146	511.00
IUUC-Oin-079268	Oryza indica	48.39	0.00e+00	634.00
IUUC-Olo-080567	Oryza longistaminata	45.44	8.00e-146	511.00
IUUC-Oni-082122	Oryza nivara	48.85	0.00e+00	636.00
IUUC-Opu-083477	Oryza punctata	48.54	0.00e+00	641.00
IUUC-Oru-084783	Oryza rufipogon	48.85	0.00e+00	637.00
IUUC-Osa-086206	Oryza sativa	48.39	0.00e+00	629.00
IUUC-Oga-088414	Otolemur garnettii	63.13	0.00e+00	1627.00
IUUC-Oar-089697	Ovis aries	65.30	0.00e+00	1355.00
IUUC-Ptr-090856	Pan troglodytes	61.79	0.00e+00	1654.00
IUUC-Pan-092521	Papio anubis	62.05	0.00e+00	1660.00
IUUC-Psi-093037	Pelodiscus sinensis	70.91	0.00e+00	1716.00
IUUC-Pma-094456	Petromyzon marinus	63.73	0.00e+00	809.00
IUUC-Pno-094861	Phaeosphaeria nodorum	47.09	1.00e-167	583.00
IUUC-Ppa-095711	Physcomitrella patens	49.35	0.00e+00	636.00
IUUC-Pfo-096223	Poecilia formosa	65.16	0.00e+00	1269.00
IUUC-Pab-098595	Pongo abelii	62.21	0.00e+00	1650.00
IUUC-Pop-099531	Populus trichocarpa	51.21	0.00e+00	635.00
IUUC-Pca-100770	Procavia capensis	60.54	5.00e-162	565.00
IUUC-Ppe-101528	Prunus persica	48.19	0.00e+00	633.00
IUUC-Pva-102247	Pteropus vampyrus	58.45	0.00e+00	848.00
IUUC-Pte-104217	Pyrenophora teres	51.55	9.00e-172	597.00
IUUC-Pyt-104797	Pyrenophora triticirepentis	50.79	4.00e-173	602.00
IUUC-Rno-105742	Rattus norvegicus	60.87	0.00e+00	1584.00
IUUC-Sce-106234	Saccharomyces cerevisiae	50.98	0.00e+00	634.00
IUUC-Sha-106622	Sarcophilus harrisii	62.30	0.00e+00	1319.00
IUUC-Sja-107874	Schizosaccharomyces japonicus	50.62	0.00e+00	655.00
IUUC-Spo-108021	Schizosaccharomyces pombe	50.84	0.00e+00	661.00
IUUC-Ssl-108500	Sclerotinia sclerotiorum	50.48	0.00e+00	627.00
IUUC-Smo-109132	Selaginella moellendorffii	50.18	3.00e-173	602.00
IUUC-Sit-110066	Setaria italica	48.49	0.00e+00	651.00
IUUC-Sly-111833	Solanum lycopersicum	51.96	0.00e+00	645.00
IUUC-Stu-112189	Solanum tuberosum	51.96	0.00e+00	647.00
IUUC-Sar-113511	Sorex araneus	55.56	0.00e+00	1213.00
IUUC-Sbi-114606	Sorghum bicolor	51.18	0.00e+00	649.00
IUUC-Ssc-116374	Sus scrofa	62.52	0.00e+00	1699.00
IUUC-Tgu-117153	Taeniopygia guttata	88.68	0.00e+00	2372.00
IUUC-Tru-118178	Takifugu rubripes	60.57	0.00e+00	1230.00
IUUC-Tsy-119524	Tarsius syrichta	60.83	0.00e+00	1617.00
IUUC-Tni-120546	Tetraodon nigroviridis	55.25	0.00e+00	1353.00
IUUC-Tca-121065	Theobroma cacao	52.23	0.00e+00	642.00
IUUC-Tre-121868	Trichoderma reesei	46.06	2.00e-160	560.00
IUUC-Tvi-122455	Trichoderma virens	46.57	1.00e-158	553.00
IUUC-Tae-123249	Triticum aestivum	51.79	0.00e+00	650.00
IUUC-Tur-126107	Triticum urartu	51.79	0.00e+00	649.00
IUUC-Tbe-127967	Tupaia belangeri	65.76	0.00e+00	813.00
IUUC-Ttr-128768	Tursiops truncatus	61.42	0.00e+00	1654.00
IUUC-Vda-129884	Verticillium dahliae	47.44	3.00e-170	592.00
IUUC-Vpa-130521	Vicugna pacos	67.71	0.00e+00	870.00
IUUC-Vvi-130838	Vitis vinifera	51.57	0.00e+00	628.00
IUUC-Xtr-132056	Xenopus tropicalis	55.81	0.00e+00	1098.00
IUUC-Xma-133113	Xiphophorus maculatus	64.90	0.00e+00	1247.00
IUUC-Yli-134344	Yarrowia lipolytica	52.94	0.00e+00	654.00
IUUC-Zma-134837	Zea mays	45.54	0.00e+00	639.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence