iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115931

Ensembl Protein ID

ENSSSCP00000021489.1

UniProt Accession

I3LBR8; I3LBR8_PIG

Genbank Protein ID

ENSSSCP00000021489

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP312783

Gene Name

PWP2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000029627.1	ENSSSCT00000028839.1	ENSSSCP00000021489.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-10	40.0	6	37

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++++++l+f ++   l+s+s+D t+++WD+
   Q: 6    GHEGPISGLCFnPTkSVLASASWDRTVRLWDM 37
           8**********987788**************7 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

LQVLSGHEGP ISGLCFNPTK SVLASASWDR TVRLWDMADS WRTTETLALT SDALAVTFRP 60
DGAELAVATL NSQITFWDPE NAVQTGSIEG RHDLKSGRKE LDKITAKHSA KGKAFTALCY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN GATCCTGGGG GCCGGGCTCC GGGGAAGGAG GCCACATCCC 60
GGGACGGGCA GCACCTAGCT CGGCGCTTCC CGGGCAGCCC TCTCCGCGGC CCTCACCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR027145--PWP2
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	87.71	0.00e+00	746.00
IUUC-Atr-003033	Amborella trichopoda	44.25	1.00e-92	333.00
IUUC-Apl-003219	Anas platyrhynchos	74.43	0.00e+00	630.00
IUUC-Aca-004950	Anolis carolinensis	72.82	0.00e+00	629.00
IUUC-Aly-006213	Arabidopsis lyrata	43.65	8.00e-90	325.00
IUUC-Ath-006593	Arabidopsis thaliana	43.51	4.00e-90	325.00
IUUC-Ago-007916	Ashbya gossypii	44.93	4.00e-88	319.00
IUUC-Acl-008225	Aspergillus clavatus	45.23	2.00e-96	346.00
IUUC-Afl-008390	Aspergillus flavus	41.29	4.00e-93	335.00
IUUC-Afu-009039	Aspergillus fumigatus	44.72	2.00e-96	347.00
IUUC-Ani-009228	Aspergillus nidulans	36.25	4.00e-64	239.00
IUUC-Ang-009663	Aspergillus niger	40.52	2.00e-86	313.00
IUUC-Aor-009923	Aspergillus oryzae	41.29	4.00e-93	335.00
IUUC-Ate-010264	Aspergillus terreus	44.47	8.00e-97	348.00
IUUC-Ame-011648	Astyanax mexicanus	73.58	1.00e-19	87.80
IUUC-Bgr-012066	Blumeria graminis	41.60	2.00e-88	320.00
IUUC-Bta-012399	Bos taurus	92.07	0.00e+00	754.00
IUUC-Bci-013757	Botrytis cinerea	43.54	6.00e-85	308.00
IUUC-Bdi-015028	Brachypodium distachyon	41.79	5.00e-84	305.00
IUUC-Bol-016040	Brassica oleracea	42.89	2.00e-93	337.00
IUUC-Bra-017096	Brassica rapa	42.82	7.00e-90	325.00
IUUC-Cel-018690	Caenorhabditis elegans	35.20	2.00e-70	260.00
IUUC-Cja-019229	Callithrix jacchus	84.40	0.00e+00	716.00
IUUC-Cfa-020504	Canis familiaris	87.90	0.00e+00	744.00
IUUC-Cpo-021574	Cavia porcellus	85.39	0.00e+00	716.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	38.12	4.00e-69	256.00
IUUC-Csa-023436	Chlorocebus sabaeus	84.63	0.00e+00	721.00
IUUC-Cin-025397	Ciona intestinalis	54.50	2.00e-71	263.00
IUUC-Csv-026194	Ciona savignyi	49.87	5.00e-111	395.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	40.86	7.00e-83	301.00
IUUC-Cne-027031	Cryptococcus neoformans	42.08	3.00e-89	322.00
IUUC-Cme-027276	Cyanidioschyzon merolae	27.83	2.00e-29	124.00
IUUC-Dre-027514	Danio rerio	64.44	4.00e-161	561.00
IUUC-Dno-029191	Dasypus novemcinctus	84.14	0.00e+00	696.00
IUUC-Dor-030149	Dipodomys ordii	80.65	0.00e+00	677.00
IUUC-Dse-031260	Dothistroma septosporum	43.12	2.00e-87	316.00
IUUC-Dme-032043	Drosophila melanogaster	43.84	1.00e-94	340.00
IUUC-Ete-033102	Echinops telfairi	89.06	8.00e-160	556.00
IUUC-Eca-033223	Equus caballus	92.13	0.00e+00	759.00
IUUC-Fca-035795	Felis catus	81.56	0.00e+00	694.00
IUUC-Fal-036830	Ficedula albicollis	73.12	6.00e-179	620.00
IUUC-Fox-037835	Fusarium oxysporum	40.33	3.00e-83	303.00
IUUC-Fso-038324	Fusarium solani	41.19	1.00e-81	297.00
IUUC-Gmo-039355	Gadus morhua	68.70	3.00e-167	582.00
IUUC-Ggr-039840	Gaeumannomyces graminis	40.69	4.00e-74	272.00
IUUC-Gga-040907	Gallus gallus	74.55	0.00e+00	633.00
IUUC-Gac-042624	Gasterosteus aculeatus	68.03	4.00e-164	572.00
IUUC-Gma-043034	Glycine max	43.81	4.00e-93	335.00
IUUC-Hsa-046327	Homo sapiens	84.40	0.00e+00	717.00
IUUC-Hvu-047416	Hordeum vulgare	41.54	6.00e-84	305.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	82.42	0.00e+00	724.00
IUUC-Kpa-049150	Komagataella pastoris	39.40	1.00e-78	288.00
IUUC-Lch-049460	Latimeria chalumnae	71.68	9.00e-173	600.00
IUUC-Lpe-050840	Leersia perrieri	43.81	4.00e-89	322.00
IUUC-Loc-052733	Lepisosteus oculatus	64.20	1.00e-161	563.00
IUUC-Lma-053277	Leptosphaeria maculans	42.38	2.00e-87	317.00
IUUC-Laf-054294	Loxodonta africana	88.89	0.00e+00	647.00
IUUC-Mcc-054624	Macaca mulatta	87.72	0.00e+00	714.00
IUUC-Meu-056665	Macropus eugenii	62.63	3.00e-66	246.00
IUUC-Mor-057288	Magnaporthe oryzae	39.90	5.00e-78	285.00
IUUC-Mpo-057594	Magnaporthe poae	40.97	3.00e-74	273.00
IUUC-Mtr-058700	Medicago truncatula	44.50	2.00e-94	340.00
IUUC-Mla-058846	Melampsora laricipopulina	44.53	5.00e-99	355.00
IUUC-Mga-059207	Meleagris gallopavo	57.79	2.00e-121	429.00
IUUC-Mvi-060327	Microbotryum violaceum	46.49	4.00e-94	338.00
IUUC-Mmr-061264	Microcebus murinus	84.09	0.00e+00	719.00
IUUC-Mdo-062327	Monodelphis domestica	76.63	0.00e+00	656.00
IUUC-Mmu-063542	Mus musculus	84.01	0.00e+00	701.00
IUUC-Mac-065142	Musa acuminata	44.56	4.00e-90	325.00
IUUC-Mpu-066098	Mustela putorius furo	89.17	0.00e+00	738.00
IUUC-Mlu-067056	Myotis lucifugus	86.18	0.00e+00	705.00
IUUC-Nfi-068323	Neosartorya fischeri	44.47	3.00e-96	346.00
IUUC-Ncr-068925	Neurospora crassa	38.93	1.00e-88	320.00
IUUC-Nle-068970	Nomascus leucogenys	85.97	0.00e+00	699.00
IUUC-Opr-070966	Ochotona princeps	91.07	2.00e-57	216.00
IUUC-Ont-071252	Oreochromis niloticus	69.39	5.00e-169	588.00
IUUC-Oan-072737	Ornithorhynchus anatinus	74.76	0.00e+00	659.00
IUUC-Oba-075794	Oryza barthii	43.59	3.00e-88	319.00
IUUC-Obr-076617	Oryza brachyantha	42.53	3.00e-87	316.00
IUUC-Ogl-077022	Oryza glaberrima	43.56	2.00e-88	320.00
IUUC-Ogu-078757	Oryza glumaepatula	43.56	8.00e-89	321.00
IUUC-Oin-079813	Oryza indica	43.04	3.00e-87	316.00
IUUC-Olo-080265	Oryza longistaminata	43.56	2.00e-88	320.00
IUUC-Ome-081494	Oryza meridionalis	43.30	2.00e-87	317.00
IUUC-Oni-082639	Oryza nivara	43.30	1.00e-87	317.00
IUUC-Opu-084005	Oryza punctata	43.81	1.00e-89	323.00
IUUC-Oru-084883	Oryza rufipogon	43.30	2.00e-88	320.00
IUUC-Osa-086158	Oryza sativa	43.30	3.00e-88	320.00
IUUC-Ola-086822	Oryzias latipes	70.08	5.00e-170	591.00
IUUC-Oga-088887	Otolemur garnettii	86.19	0.00e+00	710.00
IUUC-Oar-090110	Ovis aries	90.66	0.00e+00	750.00
IUUC-Pan-092808	Papio anubis	87.47	0.00e+00	712.00
IUUC-Psi-093954	Pelodiscus sinensis	74.94	0.00e+00	634.00
IUUC-Pno-094922	Phaeosphaeria nodorum	45.08	1.00e-92	334.00
IUUC-Ppa-095678	Physcomitrella patens	42.42	3.00e-78	286.00
IUUC-Pfo-097175	Poecilia formosa	69.05	4.00e-168	585.00
IUUC-Pab-098155	Pongo abelii	83.69	0.00e+00	717.00
IUUC-Pop-099925	Populus trichocarpa	43.33	7.00e-90	324.00
IUUC-Pca-100947	Procavia capensis	82.97	0.00e+00	689.00
IUUC-Ppe-101552	Prunus persica	44.70	3.00e-97	349.00
IUUC-Pva-102744	Pteropus vampyrus	86.85	0.00e+00	770.00
IUUC-Pgr-103389	Puccinia graminis	46.53	4.00e-101	362.00
IUUC-Ptt-103953	Puccinia triticina	45.48	2.00e-103	370.00
IUUC-Pte-104079	Pyrenophora teres	45.08	5.00e-89	322.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	45.08	1.00e-88	320.00
IUUC-Rno-105502	Rattus norvegicus	83.76	0.00e+00	701.00
IUUC-Sce-106390	Saccharomyces cerevisiae	43.41	7.00e-92	332.00
IUUC-Sha-107264	Sarcophilus harrisii	73.14	7.00e-179	619.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	41.41	1.00e-87	317.00
IUUC-Spo-108348	Schizosaccharomyces pombe	42.97	1.00e-82	301.00
IUUC-Smo-108982	Selaginella moellendorffii	45.96	7.00e-83	301.00
IUUC-Sit-110304	Setaria italica	43.04	6.00e-93	335.00
IUUC-Sly-111620	Solanum lycopersicum	45.20	1.00e-99	356.00
IUUC-Stu-112877	Solanum tuberosum	45.20	5.00e-99	355.00
IUUC-Sbi-114702	Sorghum bicolor	43.30	5.00e-94	338.00
IUUC-Sre-115129	Sporisorium reilianum	40.58	4.00e-85	309.00
IUUC-Tgu-116787	Taeniopygia guttata	72.89	3.00e-177	615.00
IUUC-Tru-118218	Takifugu rubripes	66.75	1.00e-163	570.00
IUUC-Tsy-119401	Tarsius syrichta	85.06	0.00e+00	729.00
IUUC-Tni-120046	Tetraodon nigroviridis	65.38	2.00e-162	566.00
IUUC-Tca-121685	Theobroma cacao	44.44	1.00e-97	350.00
IUUC-Tre-122154	Trichoderma reesei	41.34	2.00e-86	313.00
IUUC-Tvi-122451	Trichoderma virens	40.10	7.00e-86	311.00
IUUC-Tae-125397	Triticum aestivum	41.54	4.00e-83	302.00
IUUC-Tur-126650	Triticum urartu	41.54	9.00e-88	318.00
IUUC-Tme-127005	Tuber melanosporum	45.72	3.00e-94	339.00
IUUC-Tbe-128102	Tupaia belangeri	82.81	3.00e-86	313.00
IUUC-Ttr-128259	Tursiops truncatus	91.03	0.00e+00	688.00
IUUC-Uma-129511	Ustilago maydis	41.94	2.00e-80	293.00
IUUC-Vda-129833	Verticillium dahliae	37.60	9.00e-67	248.00
IUUC-Vvi-131572	Vitis vinifera	44.25	7.00e-97	348.00
IUUC-Xtr-131776	Xenopus tropicalis	56.12	3.00e-119	422.00
IUUC-Xma-133887	Xiphophorus maculatus	69.05	1.00e-162	566.00
IUUC-Yli-134427	Yarrowia lipolytica	45.22	6.00e-96	345.00
IUUC-Zma-135980	Zea mays	43.56	6.00e-94	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence