iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131668

UUCD1 version

UUC-ViV-00146

Ensembl Protein ID

VIT_05s0049g01840.t01

UniProt Accession

D7SZN5; D7SZN5_VITVI

Genbank Protein ID

CBI23714.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595496

Gene Name

VIT_05s0049g01840

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_05s0049g01840	VIT_05s0049g01840.t01	VIT_05s0049g01840.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.60e-15	56.0	2	68
E3 adaptor/Cullin RING/DCX/DWD	3.30e-25	87.7	264	294
UBD/Beta-Prp	4.10e-47	161.4	222	434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+ s+e++++Pvv++ sG  ++++ Ie++++++gk cP+t++plt +d+vP  t + +  + +++ s
   Q: 2    NCSMSGEVPEEPVVSKkSGLLFEKRLIERHISDYGK-CPITGEPLTMDDIVPIQTGKIVKPRPVQAAS 68
           7***********************************.*********************9998887765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+ +vt+++f  +d+l++++s D+t++vW 
   Q: 264  GHSKKVTSVKFvtQDDLFLTASADKTVRVWQ 294
           8***********877***************6 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvw...dletgqcleetls 134
            +++++ + ++  +++i++tg+ D+++ ++d ++g++++tl+gh+++v+s++f  ++d ++++s+d+t+rvw   d e++ c + +l+
   Q: 222  TNKPGILSADIYYSKDIIATGGVDANAVLFDRQSGQILSTLSGHSKKVTSVKFVTQDDLFLTASADKTVRVWqgsDNENYNCRH-ILK 308
           577788888888888888888888888888888888888888888888888888888888888888888887333566666666.888 PP
   S: 135  ghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
            h++ v+ v+vh ++n++v++slD+t  ++dl++g +l++    +    +  +s +f+++g  l +g     vk+wd++++  v ++ 
   Q: 309  DHTAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQVadaS--GSEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVARFD 394
           888888888888888888888888888888888888888884322..24445566688888888888888888888888888888888 PP
   S: 220  ghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
           gh   v+ + fs+n+ +l+++++Dg +++Wdlr+  + +t+
   Q: 395  GHVGAVTAISFSENGYFLATAAHDG-VKLWDLRKLRNFRTF 434
           8888888888888887777777554.788888887776665 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MNCSMSGEVP EEPVVSKKSG LLFEKRLIER HISDYGKCPI TGEPLTMDDI VPIQTGKIVK 60
PRPVQAASIP GMLGMFQIEW DGLMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTACACTCC CTTCTTCAGC AGAGCTTCCG GAGAAACCCT AGCTTTCTCA GCCACTATGA 60
ACTGCTCCAG TAACTCTTTC TCTCTTTTTC TATCTCTTTA TTTCTATGTG TATTTCGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0000974--C:Prp19 complex
GO:0071006--C:U2-type catalytic step 1 spliceosome
GO:0004842--F:ubiquitin-protein transferase activity
GO:0000349--P:generation of catalytic spliceosome for first transesterification step

KEGG

vvi:100249408

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	70.76	0.00e+00	771.00
IUUC-Aml-001230	Ailuropoda melanoleuca	43.66	8.00e-109	386.00
IUUC-Atr-002594	Amborella trichopoda	78.24	0.00e+00	862.00
IUUC-Apl-003686	Anas platyrhynchos	41.50	2.00e-82	298.00
IUUC-Aca-005272	Anolis carolinensis	44.59	1.00e-115	409.00
IUUC-Aly-005586	Arabidopsis lyrata	76.91	0.00e+00	849.00
IUUC-Ath-007696	Arabidopsis thaliana	77.46	0.00e+00	831.00
IUUC-Ago-007879	Ashbya gossypii	24.75	7.00e-28	117.00
IUUC-Acl-008335	Aspergillus clavatus	33.12	8.00e-59	220.00
IUUC-Afl-008527	Aspergillus flavus	32.37	4.00e-65	241.00
IUUC-Afu-008957	Aspergillus fumigatus	33.54	1.00e-67	249.00
IUUC-Ani-009280	Aspergillus nidulans	33.21	6.00e-63	234.00
IUUC-Ang-009746	Aspergillus niger	33.26	5.00e-65	240.00
IUUC-Aor-009905	Aspergillus oryzae	32.18	5.00e-67	247.00
IUUC-Ate-010412	Aspergillus terreus	33.12	4.00e-60	224.00
IUUC-Ame-011561	Astyanax mexicanus	40.08	1.00e-40	159.00
IUUC-Bgr-012283	Blumeria graminis	29.37	3.00e-52	198.00
IUUC-Bta-013242	Bos taurus	44.02	2.00e-114	405.00
IUUC-Bci-013901	Botrytis cinerea	32.76	1.00e-66	246.00
IUUC-Bdi-014277	Brachypodium distachyon	77.26	0.00e+00	854.00
IUUC-Bol-016207	Brassica oleracea	77.46	0.00e+00	845.00
IUUC-Bra-017650	Brassica rapa	78.42	0.00e+00	841.00
IUUC-Cel-018271	Caenorhabditis elegans	40.08	2.00e-101	362.00
IUUC-Cja-019879	Callithrix jacchus	44.32	5.00e-114	403.00
IUUC-Cfa-020175	Canis familiaris	43.82	3.00e-114	404.00
IUUC-Cpo-022379	Cavia porcellus	44.21	1.00e-114	405.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	46.35	7.00e-131	459.00
IUUC-Csa-023500	Chlorocebus sabaeus	44.21	8.00e-115	406.00
IUUC-Cho-025065	Choloepus hoffmanni	34.81	1.00e-41	162.00
IUUC-Cin-025699	Ciona intestinalis	45.00	9.00e-103	366.00
IUUC-Csv-026128	Ciona savignyi	44.51	9.00e-118	416.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	32.57	3.00e-64	238.00
IUUC-Cne-026860	Cryptococcus neoformans	37.40	2.00e-94	338.00
IUUC-Dre-028187	Danio rerio	43.49	3.00e-113	401.00
IUUC-Dno-029453	Dasypus novemcinctus	44.21	1.00e-114	405.00
IUUC-Dor-030150	Dipodomys ordii	41.77	2.00e-39	156.00
IUUC-Dse-031220	Dothistroma septosporum	31.60	6.00e-63	234.00
IUUC-Dme-031906	Drosophila melanogaster	44.81	4.00e-111	394.00
IUUC-Ete-033035	Echinops telfairi	44.12	3.00e-56	212.00
IUUC-Eca-033478	Equus caballus	44.02	3.00e-114	404.00
IUUC-Eeu-034974	Erinaceus europaeus	44.25	5.00e-76	277.00
IUUC-Fca-036194	Felis catus	43.52	1.00e-112	399.00
IUUC-Fal-037417	Ficedula albicollis	44.21	7.00e-115	406.00
IUUC-Fox-037922	Fusarium oxysporum	31.88	1.00e-62	233.00
IUUC-Fso-038256	Fusarium solani	32.24	7.00e-66	243.00
IUUC-Gmo-038713	Gadus morhua	44.02	3.00e-114	404.00
IUUC-Ggr-039854	Gaeumannomyces graminis	31.70	2.00e-54	206.00
IUUC-Gga-041143	Gallus gallus	44.59	5.00e-116	410.00
IUUC-Gac-042129	Gasterosteus aculeatus	44.21	4.00e-115	407.00
IUUC-Gma-043635	Glycine max	85.52	0.00e+00	954.00
IUUC-Ggo-045262	Gorilla gorilla	44.21	8.00e-115	406.00
IUUC-Hsa-046036	Homo sapiens	44.21	8.00e-115	406.00
IUUC-Hvu-047442	Hordeum vulgare	72.29	7.00e-139	485.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	43.63	2.00e-113	401.00
IUUC-Lch-050105	Latimeria chalumnae	44.08	9.00e-115	406.00
IUUC-Lpe-050976	Leersia perrieri	77.46	0.00e+00	844.00
IUUC-Loc-052042	Lepisosteus oculatus	39.34	2.00e-79	289.00
IUUC-Lma-053143	Leptosphaeria maculans	32.08	6.00e-62	231.00
IUUC-Laf-053451	Loxodonta africana	42.80	1.00e-111	395.00
IUUC-Mcc-055786	Macaca mulatta	44.21	8.00e-115	406.00
IUUC-Meu-056161	Macropus eugenii	42.24	2.00e-49	189.00
IUUC-Mor-057215	Magnaporthe oryzae	33.46	2.00e-59	222.00
IUUC-Mpo-057419	Magnaporthe poae	30.71	3.00e-50	191.00
IUUC-Mtr-057756	Medicago truncatula	79.65	0.00e+00	880.00
IUUC-Mla-059085	Melampsora laricipopulina	35.05	5.00e-78	284.00
IUUC-Mga-060158	Meleagris gallopavo	43.45	3.00e-101	361.00
IUUC-Mvi-060441	Microbotryum violaceum	35.34	4.00e-73	268.00
IUUC-Mmr-061085	Microcebus murinus	44.21	8.00e-115	406.00
IUUC-Mdo-061804	Monodelphis domestica	44.21	7.00e-115	406.00
IUUC-Mmu-063608	Mus musculus	42.27	2.00e-110	392.00
IUUC-Mac-064972	Musa acuminata	78.85	0.00e+00	858.00
IUUC-Mpu-065700	Mustela putorius furo	43.82	3.00e-114	404.00
IUUC-Mlu-068223	Myotis lucifugus	42.96	1.00e-111	395.00
IUUC-Nfi-068504	Neosartorya fischeri	34.37	2.00e-69	255.00
IUUC-Ncr-068729	Neurospora crassa	32.49	5.00e-60	224.00
IUUC-Nle-069754	Nomascus leucogenys	44.21	8.00e-115	406.00
IUUC-Opr-070621	Ochotona princeps	44.38	9.00e-107	379.00
IUUC-Ont-071377	Oreochromis niloticus	44.59	4.00e-114	404.00
IUUC-Oan-073498	Ornithorhynchus anatinus	32.14	3.00e-35	141.00
IUUC-Ocu-074182	Oryctolagus cuniculus	42.49	4.00e-111	394.00
IUUC-Oba-075509	Oryza barthii	76.67	0.00e+00	853.00
IUUC-Obr-076480	Oryza brachyantha	77.20	0.00e+00	861.00
IUUC-Ogl-077052	Oryza glaberrima	76.67	0.00e+00	852.00
IUUC-Ogu-078919	Oryza glumaepatula	76.67	0.00e+00	853.00
IUUC-Oin-079357	Oryza indica	73.23	0.00e+00	798.00
IUUC-Olo-080376	Oryza longistaminata	76.53	0.00e+00	798.00
IUUC-Ome-081973	Oryza meridionalis	76.73	0.00e+00	798.00
IUUC-Oni-082849	Oryza nivara	76.48	0.00e+00	853.00
IUUC-Opu-083243	Oryza punctata	77.06	0.00e+00	856.00
IUUC-Oru-084613	Oryza rufipogon	76.48	0.00e+00	851.00
IUUC-Osa-085407	Oryza sativa	76.48	0.00e+00	850.00
IUUC-Ola-086566	Oryzias latipes	44.34	3.00e-114	404.00
IUUC-Olu-087757	Ostreococcus lucimarinus	43.19	7.00e-112	396.00
IUUC-Oga-089010	Otolemur garnettii	42.91	2.00e-109	388.00
IUUC-Oar-089638	Ovis aries	44.02	2.00e-114	405.00
IUUC-Ptr-091141	Pan troglodytes	44.21	8.00e-115	406.00
IUUC-Pan-092662	Papio anubis	44.21	8.00e-115	406.00
IUUC-Psi-093777	Pelodiscus sinensis	44.16	5.00e-90	323.00
IUUC-Pno-095115	Phaeosphaeria nodorum	32.23	4.00e-61	228.00
IUUC-Ppa-095924	Physcomitrella patens	70.08	0.00e+00	763.00
IUUC-Pfo-096390	Poecilia formosa	44.40	2.00e-114	404.00
IUUC-Pab-098250	Pongo abelii	44.35	4.00e-110	390.00
IUUC-Pop-099854	Populus trichocarpa	85.11	0.00e+00	949.00
IUUC-Pca-100553	Procavia capensis	44.59	8.00e-113	399.00
IUUC-Ppe-101383	Prunus persica	79.73	0.00e+00	865.00
IUUC-Pva-102189	Pteropus vampyrus	44.02	2.00e-114	405.00
IUUC-Pgr-103304	Puccinia graminis	33.09	5.00e-74	271.00
IUUC-Ptt-103984	Puccinia triticina	33.39	5.00e-75	274.00
IUUC-Pte-104385	Pyrenophora teres	30.45	2.00e-57	215.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	30.72	3.00e-57	214.00
IUUC-Rno-105581	Rattus norvegicus	43.82	4.00e-114	404.00
IUUC-Sce-106147	Saccharomyces cerevisiae	38.93	2.00e-23	102.00
IUUC-Sha-107071	Sarcophilus harrisii	42.41	5.00e-111	394.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	30.27	6.00e-42	164.00
IUUC-Spo-108315	Schizosaccharomyces pombe	38.50	6.00e-31	127.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	31.21	2.00e-61	229.00
IUUC-Smo-109648	Selaginella moellendorffii	66.28	0.00e+00	739.00
IUUC-Sit-109873	Setaria italica	77.67	0.00e+00	857.00
IUUC-Sly-111673	Solanum lycopersicum	84.59	0.00e+00	910.00
IUUC-Stu-112125	Solanum tuberosum	84.39	0.00e+00	907.00
IUUC-Sbi-114696	Sorghum bicolor	72.28	0.00e+00	754.00
IUUC-Sre-115134	Sporisorium reilianum	33.69	9.00e-80	290.00
IUUC-Ssc-116260	Sus scrofa	44.02	1.00e-114	405.00
IUUC-Tgu-116533	Taeniopygia guttata	44.59	8.00e-116	409.00
IUUC-Tru-117800	Takifugu rubripes	43.74	3.00e-114	404.00
IUUC-Tsy-118980	Tarsius syrichta	42.13	1.00e-100	359.00
IUUC-Tni-120334	Tetraodon nigroviridis	43.52	1.00e-77	283.00
IUUC-Tca-121807	Theobroma cacao	82.82	0.00e+00	922.00
IUUC-Tre-121920	Trichoderma reesei	31.50	1.00e-61	229.00
IUUC-Tvi-122294	Trichoderma virens	30.51	1.00e-50	193.00
IUUC-Tae-125713	Triticum aestivum	76.49	0.00e+00	850.00
IUUC-Tur-126664	Triticum urartu	66.02	0.00e+00	767.00
IUUC-Tme-127026	Tuber melanosporum	34.48	1.00e-68	253.00
IUUC-Tbe-127582	Tupaia belangeri	44.54	4.00e-77	281.00
IUUC-Ttr-128313	Tursiops truncatus	43.63	6.00e-113	400.00
IUUC-Uma-129626	Ustilago maydis	34.25	2.00e-79	288.00
IUUC-Vda-129699	Verticillium dahliae	31.74	4.00e-60	224.00
IUUC-Vpa-130593	Vicugna pacos	44.95	1.00e-105	375.00
IUUC-Xtr-132186	Xenopus tropicalis	45.33	3.00e-100	357.00
IUUC-Xma-133212	Xiphophorus maculatus	44.04	1.00e-113	402.00
IUUC-Yli-134607	Yarrowia lipolytica	51.91	6.00e-36	141.00
IUUC-Zma-135662	Zea mays	77.29	0.00e+00	859.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence