iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110887

Ensembl Protein ID

Solyc04g008020.2.1

UniProt Accession

K4BNV8; K4BNV8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g008020.2	Solyc04g008020.2.1	Solyc04g008020.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.00e-09	36.8	301	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  ++ lpC+H+fh +C+ kw       + +++CPlC+
   Q: 301  CCICLTSYEDGaeLHALPCNHHFHSTCIVKW------LKMNATCPLCK 342
           ********7776699****************......**********7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MATEPPNLIS SDPTTPLLHR RLENGGRGGR QSSLAVLLGR VTGRRGGGGG GASLLVRETA 60
ARELDERRAD WGYSKPVVAL DMMWNLGFVI VSFVILSCAV DESPNVPIRL WICGYALQCV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAACTG AGCCACCAAA TTTGATTTCC TCTGACCCCA CAACTCCACT TCTACACCGG 60
CGACTCGAAA ACGGCGGCAG AGGGGGTCGT CAGTCATCAC TTGCGGTACT TCTTGGTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006309	Arabidopsis lyrata	65.92	2.00e-106	377.00
IUUC-Ath-007135	Arabidopsis thaliana	68.09	1.00e-108	385.00
IUUC-Bdi-014419	Brachypodium distachyon	57.93	9.00e-67	246.00
IUUC-Bol-015503	Brassica oleracea	65.89	1.00e-94	339.00
IUUC-Bra-017341	Brassica rapa	67.77	6.00e-99	353.00
IUUC-Gma-042852	Glycine max	72.35	5.00e-102	363.00
IUUC-Lpe-050934	Leersia perrieri	54.49	3.00e-89	321.00
IUUC-Mtr-058387	Medicago truncatula	69.45	7.00e-98	349.00
IUUC-Mac-064512	Musa acuminata	61.99	1.00e-90	325.00
IUUC-Obr-076831	Oryza brachyantha	57.09	4.00e-72	263.00
IUUC-Ogu-077960	Oryza glumaepatula	48.80	4.00e-81	293.00
IUUC-Oin-079107	Oryza indica	48.29	2.00e-77	281.00
IUUC-Olo-080835	Oryza longistaminata	46.67	4.00e-62	231.00
IUUC-Ome-081564	Oryza meridionalis	56.45	4.00e-84	303.00
IUUC-Oni-082731	Oryza nivara	49.10	8.00e-82	296.00
IUUC-Opu-083749	Oryza punctata	56.31	2.00e-83	301.00
IUUC-Oru-084835	Oryza rufipogon	49.10	8.00e-82	296.00
IUUC-Pop-098913	Populus trichocarpa	68.47	2.00e-104	371.00
IUUC-Ppe-101978	Prunus persica	66.67	2.00e-107	381.00
IUUC-Sit-110199	Setaria italica	57.65	5.00e-84	303.00
IUUC-Stu-112563	Solanum tuberosum	95.47	5.00e-172	595.00
IUUC-Sbi-114428	Sorghum bicolor	57.33	1.00e-81	295.00
IUUC-Tca-121328	Theobroma cacao	73.47	3.00e-102	364.00
IUUC-Tae-123132	Triticum aestivum	57.47	2.00e-66	245.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence