iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131185

UUCD1 version

UUC-ViV-00678

Ensembl Protein ID

VIT_01s0011g04770.t01

UniProt Accession

F6HFJ0; F6HFJ0_VITVI

Genbank Protein ID

CCB50839.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595752

Gene Name

VIT_01s0011g04770

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0011g04770	VIT_01s0011g04770.t01	VIT_01s0011g04770.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.00e-31	107.9	260	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +flCpIslelMrdPv++++G+ty+rs+I++w++ g+ tcP+t+ +l++ +l+Pn++lr+li +wc +n++
   Q: 260  IPNDFLCPISLELMRDPVIVATGQTYERSYIQRWIDCGNLTCPKTQLELQNLTLTPNYALRSLITQWCTKNNI 332
           799******************************************************************9986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDAGGELLAL VNDVVGVSVG FGGVFKRDCT DLVRRIALLT HLFEEIRDFG AGLRPLDVST 60
SSASPLTCLS EVANALQAAK RLLSAAGNFS SDAFSDGAAK KITFQFQCVT WKLEKTLGNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCACGTGCTC CCTCCACGTG GCAATGGACG CCGGCGGCGA GCTCTTGGCC CTCGTGAACG 60
ACGTCGTGGG GGTCTCCGTT GGGTTTGGAG GTGTGTTCAA GCGGGATTGC ACGGATCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100264511

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000977	Aegilops tauschii	54.05	2.00e-161	561.00
IUUC-Aly-005733	Arabidopsis lyrata	64.74	0.00e+00	684.00
IUUC-Ath-007555	Arabidopsis thaliana	64.40	0.00e+00	712.00
IUUC-Bdi-014341	Brachypodium distachyon	53.01	3.00e-169	587.00
IUUC-Bol-015936	Brassica oleracea	60.81	0.00e+00	716.00
IUUC-Bra-016825	Brassica rapa	60.84	0.00e+00	716.00
IUUC-Fso-038217	Fusarium solani	26.59	7.00e-17	81.30
IUUC-Gma-043730	Glycine max	70.60	0.00e+00	820.00
IUUC-Lpe-051513	Leersia perrieri	53.82	1.00e-170	592.00
IUUC-Mtr-058156	Medicago truncatula	70.71	0.00e+00	810.00
IUUC-Mac-065650	Musa acuminata	51.91	4.00e-162	564.00
IUUC-Oba-075045	Oryza barthii	52.34	4.00e-170	590.00
IUUC-Obr-076820	Oryza brachyantha	60.99	3.00e-152	530.00
IUUC-Ogl-077779	Oryza glaberrima	53.50	1.00e-171	595.00
IUUC-Ogu-078572	Oryza glumaepatula	53.66	7.00e-172	596.00
IUUC-Oin-079487	Oryza indica	53.50	3.00e-171	593.00
IUUC-Olo-080348	Oryza longistaminata	56.22	4.00e-168	583.00
IUUC-Ome-081282	Oryza meridionalis	53.49	2.00e-172	598.00
IUUC-Oni-083061	Oryza nivara	53.50	3.00e-171	593.00
IUUC-Opu-083297	Oryza punctata	53.67	9.00e-162	562.00
IUUC-Oru-084442	Oryza rufipogon	53.66	1.00e-171	595.00
IUUC-Osa-085919	Oryza sativa	53.66	1.00e-171	595.00
IUUC-Pop-099289	Populus trichocarpa	69.71	0.00e+00	802.00
IUUC-Ppe-101146	Prunus persica	67.99	0.00e+00	795.00
IUUC-Sit-110422	Setaria italica	54.59	2.00e-160	558.00
IUUC-Sly-111534	Solanum lycopersicum	64.92	0.00e+00	785.00
IUUC-Stu-112138	Solanum tuberosum	68.34	0.00e+00	799.00
IUUC-Sbi-114533	Sorghum bicolor	57.50	5.00e-166	577.00
IUUC-Tca-121496	Theobroma cacao	71.38	0.00e+00	845.00
IUUC-Tae-125409	Triticum aestivum	54.37	2.00e-150	525.00
IUUC-Tur-126634	Triticum urartu	53.29	2.00e-145	508.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence