iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-080026

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA016748	BGIOSGA016748-TA	BGIOSGA016748-PA

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-27	93.2	717	754
UBD/Beta-Prp	6.20e-46	157.9	545	684

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v ++++ s+  +l+s s D  +kvW++++g++++
   Q: 717  GHNSEVQSVCWdSSgQYLASVSQD-LVKVWSISSGDCTH 754
           8**********9556*********.9***********97 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltgg 178
           v  ++ ++++v++++fs +g+ l+s++h + + +w++et q  + t ++h  +++ v++ p++n l+++s Drt++lW+    g+ l+t+ g 
   Q: 545  VNCWRTNNSKVVCCHFSSDGKILASAGHEKKAVLWNMETFQTQY-TAEEHAVIITDVRFRPNSNQLATSSFDRTIKLWNAaDPGFSLHTFAG- 635
           5668899*************************************.**********************************96779******99. PP
   S: 179  htdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvk 226
           h + ++sl+f++++   l s++ +g +++w++++ +c+r+++g t++v+
   Q: 636  HCSGITSLDFHPKKtDLLCSCDSNGEIRYWNVSQLSCMRAMKGGTAQVR 684
           *************944567************************999986 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MWALIPTFCC ELGLIVLAMV LICVVFGSVC SGLCSGMAQS NWEADKMLDV YIYDYLLKRN 60
LQATAKSFMA EGKVSADPVA IDAPGGFLFE WWSVFWDIFI ARTNEKHSEI AAAYLEAQQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGGCTC TGATCCCTAC GTTCTGCTGT GAATTAGGAC TGATTGTGCT GGCTATGGTG 60
CTGATTTGTG TCGTGTTTGG TTCGGTTTGC TCGGGGTTGT GCAGCGGAAT GGCGCAGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002717	Amborella trichopoda	65.93	0.00e+00	910.00
IUUC-Lpe-051527	Leersia perrieri	93.30	0.00e+00	1379.00
IUUC-Oba-075243	Oryza barthii	96.97	0.00e+00	1441.00
IUUC-Obr-076847	Oryza brachyantha	93.95	0.00e+00	1378.00
IUUC-Ogl-077774	Oryza glaberrima	99.87	0.00e+00	1451.00
IUUC-Ogu-077963	Oryza glumaepatula	97.50	0.00e+00	1440.00
IUUC-Olo-080947	Oryza longistaminata	93.97	0.00e+00	1446.00
IUUC-Ome-081723	Oryza meridionalis	96.53	0.00e+00	1429.00
IUUC-Oni-083036	Oryza nivara	97.37	0.00e+00	1439.00
IUUC-Opu-083248	Oryza punctata	98.62	0.00e+00	1435.00
IUUC-Oru-084534	Oryza rufipogon	98.11	0.00e+00	1442.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence