iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114572

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G189000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g026250	Sb06g026250.1	Sb06g026250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.50e-38	131.7	10	150

Active Site

Position(s)	Description	Evidence
95	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdppegisakpvdesd....ltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekW 92
           Rl++e k+++k++p+g++akp++  d    l+ w+++i G+e+t ++gg+F l+++fpedYP++PP +kf   +fh nvy++G+vClsil   ++W
   Q: 10   RLAEERKSWRKSHPHGFVAKPETLPDgsvnLMVWKCVIPGKEGTDWDGGYFPLTLHFPEDYPSSPPICKFPAGFFHVNVYPTGAVCLSILS--SAW 103
           89******************9875555555************************************************************8..*** PP
   S: 93   spalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvre 139
           ++ ++v+++l++iq ll++pnp+s++++  ++l+kk+  +yk +vr+
   Q: 104  KASITVRQILIGIQDLLDNPNPASAAQDICYRLYKKDMPKYKDHVRQ 150
           *******************************************9986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASGGIARGR LAEERKSWRK SHPHGFVAKP ETLPDGSVNL MVWKCVIPGK EGTDWDGGYF 60
PLTLHFPEDY PSSPPICKFP AGFFHVNVYP TGAVCLSILS SAWKASITVR QILIGIQDLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACCGATGC AAACCCATCC ACTGACATCC CGCTCGCGCG ATTAGCCCCA AAATTTCAGA 60
GTGCAACGCT ACCAGGGTCG GGTGGGATGG CATCTGGTGG CATCGCCCGC GGCCGACTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0019789--F:SUMO transferase activity

KEGG

sbi:SORBI_06g026250

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014080	Brachypodium distachyon	78.62	4.00e-76	275.00
IUUC-Lpe-051667	Leersia perrieri	78.12	3.00e-76	275.00
IUUC-Oba-075014	Oryza barthii	77.50	3.00e-75	272.00
IUUC-Obr-076450	Oryza brachyantha	76.40	1.00e-74	271.00
IUUC-Ogl-077646	Oryza glaberrima	77.50	3.00e-75	272.00
IUUC-Ogu-078602	Oryza glumaepatula	77.50	3.00e-75	272.00
IUUC-Oin-079927	Oryza indica	77.50	3.00e-75	272.00
IUUC-Olo-080940	Oryza longistaminata	77.50	3.00e-75	272.00
IUUC-Ome-081857	Oryza meridionalis	73.12	7.00e-69	251.00
IUUC-Oni-082684	Oryza nivara	77.50	3.00e-75	272.00
IUUC-Opu-083383	Oryza punctata	75.00	2.00e-71	260.00
IUUC-Oru-084557	Oryza rufipogon	77.50	3.00e-75	272.00
IUUC-Sit-110380	Setaria italica	86.79	8.00e-82	294.00
IUUC-Tae-123076	Triticum aestivum	76.43	2.00e-74	270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence