iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002534

Ensembl Protein ID

ERN11962

UniProt Accession

W1PPK3; W1PPK3_AMBTC

Genbank Protein ID

ERN11962.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

KI392652

Gene Name

AMTR_s00184p00030540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00184p00030540	ERN11962	ERN11962

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.10e-16	61.3	274	374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedldkavsllaskksl 76
           ++vkvs++g+++++++dl+ +  +++L  a+++ +                           l++se+ l+YeD+dGD++ l++D++++++++      s+
   Q: 274  LFVKVSMDGAPYLRKVDLKTYSAYQELSTALEKmFScftigqcgshgvsgrdglsesklkdLLNGSEYVLTYEDKDGDWM-LVGDVPWEMFID------SC 367
           68*******************************722566999******************99999***************.************......** PP
   S: 77   lrlliqk 83
           +rl+i+k
   Q: 368  KRLRIMK 374
           ******8 PP

Organism

Amborella trichopoda

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSPPLGHVEE GLGKGVPSLI SSASSENLSN NNSGLREHNY MGLSDASSLE SSVITCPLEE 60
KEDSLNLKET ELRLGLPGSR SPVRDPELCL LPSLKLDEKA LFPLAPLKEN TSEEKNGRNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCCAC CTCTTGGCCA TGTCGAGGAG GGATTGGGAA AAGGGGTTCC CTCTCTCATA 60
TCGTCAGCTT CTTCAGAAAA TCTCAGCAAT AACAACTCTG GGTTGAGAGA ACACAATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

atr:18440165

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015732	Brassica oleracea	50.82	2.00e-86	310.00
IUUC-Bra-016911	Brassica rapa	63.41	1.00e-72	263.00
IUUC-Cel-018552	Caenorhabditis elegans	56.25	2.30e-01	26.90
IUUC-Gma-044179	Glycine max	57.53	3.00e-105	373.00
IUUC-Mtr-058323	Medicago truncatula	56.51	3.00e-96	343.00
IUUC-Mla-059044	Melampsora laricipopulina	47.37	1.10e+00	28.10
IUUC-Olo-080519	Oryza longistaminata	57.72	1.00e-43	168.00
IUUC-Pop-099102	Populus trichocarpa	58.29	8.00e-103	365.00
IUUC-Ppe-101672	Prunus persica	57.36	2.00e-106	378.00
IUUC-Smo-109586	Selaginella moellendorffii	50.27	6.00e-43	166.00
IUUC-Stu-112219	Solanum tuberosum	56.89	2.00e-102	364.00
IUUC-Tca-121767	Theobroma cacao	59.94	2.00e-104	371.00
IUUC-Vpa-130130	Vicugna pacos	33.33	1.80e-01	29.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence