iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058452

Ensembl Protein ID

KEH21350

UniProt Accession

A0A072U6A2; A0A072U6A2_MEDTR

Genbank Protein ID

KEH21350.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g103227

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g103227	KEH21350	KEH21350

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-25	90.4	395	468
E3 adaptor/Cullin RING/DCX/DWD	7.20e-14	52.8	1057	1086

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceenss 74
           +p++f+CpI+ +++ dPv+l++G+ty+r++Ie+w+++ + tcP+trq+l++++l + n++l+rl+ +w e n s
   Q: 395  PPKDFVCPITSNIFDDPVTLETGQTYERKAIEEWFNRENITCPITRQKLQNTKLpKTNYVLKRLVASWKEHNPS 468
           79******************************************************************998875 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtc.lafsdtllvsGsdDgtikvWDlrtgv 34
           +v + ++f  + ++sG  Dg+ikvW l+++ 
   Q: 1057 DVLSvICF-KDKIISGHTDGSIKVWTLKDNE 1086
           45552578.358*************998766 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MNTTRTQILR YTTAFITGVI HQSQLRRHLI ETLHRETPIT NQVTLKQLNL ASEALESAVS 60
NSSSAIRSSS LSLAEKLLLP LPEYPLSSFL LSLIQTLRNH AEESAIILLR IFHSNPSLAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTAAACCTC ATTTCACTCA TTCCCATTCC GATCAAAAAC CACCGCCATG AACACAACAC 60
GAACTCAAAT CCTCCGTTAC ACTACCGCAT TCATCACCGG CGTTATTCAT CAATCACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

mtr:MTR_8g103227

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	49.90	0.00e+00	901.00
IUUC-Atr-002936	Amborella trichopoda	40.12	0.00e+00	896.00
IUUC-Afu-009116	Aspergillus fumigatus	25.41	3.00e-10	60.50
IUUC-Bdi-014680	Brachypodium distachyon	43.47	0.00e+00	952.00
IUUC-Gma-044256	Glycine max	76.34	0.00e+00	1927.00
IUUC-Hvu-047711	Hordeum vulgare	49.87	6.00e-103	367.00
IUUC-Lpe-051224	Leersia perrieri	43.87	0.00e+00	778.00
IUUC-Mac-064685	Musa acuminata	50.88	0.00e+00	1132.00
IUUC-Obr-076347	Oryza brachyantha	44.15	0.00e+00	878.00
IUUC-Ogl-077695	Oryza glaberrima	43.12	0.00e+00	788.00
IUUC-Ogu-078873	Oryza glumaepatula	42.82	0.00e+00	804.00
IUUC-Oin-079745	Oryza indica	49.83	8.00e-128	450.00
IUUC-Olo-081050	Oryza longistaminata	47.85	6.00e-123	434.00
IUUC-Ome-081604	Oryza meridionalis	43.80	0.00e+00	801.00
IUUC-Oni-082155	Oryza nivara	42.20	0.00e+00	784.00
IUUC-Opu-083775	Oryza punctata	46.18	0.00e+00	724.00
IUUC-Oru-084628	Oryza rufipogon	40.85	0.00e+00	768.00
IUUC-Osa-086224	Oryza sativa	47.98	1.00e-85	309.00
IUUC-Pop-099122	Populus trichocarpa	56.73	0.00e+00	958.00
IUUC-Ppe-101249	Prunus persica	59.22	0.00e+00	1290.00
IUUC-Sit-110152	Setaria italica	50.89	0.00e+00	926.00
IUUC-Sly-111919	Solanum lycopersicum	56.37	0.00e+00	1180.00
IUUC-Stu-111946	Solanum tuberosum	53.96	0.00e+00	1314.00
IUUC-Sbi-114464	Sorghum bicolor	42.84	0.00e+00	951.00
IUUC-Tca-121369	Theobroma cacao	60.52	0.00e+00	1463.00
IUUC-Tae-123295	Triticum aestivum	43.23	0.00e+00	948.00
IUUC-Tur-126163	Triticum urartu	49.49	0.00e+00	724.00
IUUC-Vvi-131144	Vitis vinifera	63.60	0.00e+00	1359.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence