iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014949

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000884

Gene Name

LOC100835684; BRADI_5g16540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G16540	BRADI5G16540.1	BRADI5G16540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.80e-07	30.6	41	106
E3 activity/RING/RING	1.20e-09	39.1	44	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl......asggk.........tcPvtrqplteedlvPn 58
            f C I l+   dPvv+ +G+ y   +I +wl      a   +         +cPv++++l+ ++lvP 
   Q: 41   SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLqpaaesA---SsnnrssarqQCPVCKATLSADSLVPL 106
           599*****************************7665552...1455789999***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.......pglknssskefrCPlCr 46
           C iCl+   d p+v+ CgH+++  C++ w         ++n ss +++CP+C+
   Q: 44   CNICLDFAAD-PVVTLCGHLYCWPCIYEWlqpaaesASSNNRSSARQQCPVCK 95
           99****9999.999**********************999999**********7 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MEAGRMDQVC MAAINSQPSV SDDKPMKNIS GEMPAAAGSG SFDCNICLDF AADPVVTLCG 60
HLYCWPCIYE WLQPAAESAS SNNRSSARQQ CPVCKATLSA DSLVPLYGRG GSSKKSLDGM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCAGGTGA CGTCGACGCC TAATCTCATC CCCCTCCTTC TCCTTCCTCC TCGCAGCGAC 60
ACAGCACCCG CAATCTCCCG ATTCTCGCCT CCTTTCTTGA TCCCCTCTCC CGATTCTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

bdi:100835684

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000767	Aegilops tauschii	79.10	4.00e-103	366.00
IUUC-Bra-017909	Brassica rapa	33.79	3.00e-27	114.00
IUUC-Gma-044004	Glycine max	35.62	3.00e-29	121.00
IUUC-Hvu-047276	Hordeum vulgare	79.12	3.00e-108	383.00
IUUC-Lpe-051528	Leersia perrieri	74.27	2.00e-94	338.00
IUUC-Mtr-058147	Medicago truncatula	35.10	2.00e-30	125.00
IUUC-Mac-065357	Musa acuminata	49.78	2.00e-47	181.00
IUUC-Obr-076866	Oryza brachyantha	74.69	1.00e-94	338.00
IUUC-Ogl-077734	Oryza glaberrima	73.33	1.00e-91	328.00
IUUC-Ogu-078280	Oryza glumaepatula	73.33	4.00e-92	330.00
IUUC-Oin-079906	Oryza indica	73.33	4.00e-92	330.00
IUUC-Olo-081070	Oryza longistaminata	72.92	7.00e-92	328.00
IUUC-Ome-081915	Oryza meridionalis	72.92	1.00e-91	328.00
IUUC-Oni-082950	Oryza nivara	73.33	4.00e-92	330.00
IUUC-Opu-083549	Oryza punctata	74.27	6.00e-96	342.00
IUUC-Osa-085904	Oryza sativa	73.33	4.00e-92	330.00
IUUC-Pop-099944	Populus trichocarpa	38.53	2.00e-30	125.00
IUUC-Ppe-101989	Prunus persica	36.78	5.00e-27	114.00
IUUC-Sit-110543	Setaria italica	73.17	6.00e-102	362.00
IUUC-Stu-112136	Solanum tuberosum	36.95	3.00e-28	117.00
IUUC-Sbi-114178	Sorghum bicolor	71.54	5.00e-100	356.00
IUUC-Tca-121161	Theobroma cacao	36.44	7.00e-28	116.00
IUUC-Tae-124302	Triticum aestivum	80.32	2.00e-108	384.00
IUUC-Tur-126644	Triticum urartu	79.74	1.00e-96	346.00
IUUC-Vvi-131123	Vitis vinifera	40.74	2.00e-30	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence