iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113829

UUCD1 version

UUC-SoB-00064

Ensembl Protein ID

Sb06g001620.1

UniProt Accession

A0A1B6PJI0; A0A1B6PJI0_SORBI

Genbank Protein ID

KXG25821.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G017000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g001620	Sb06g001620.1	Sb06g001620.1
Sb06g001620	Sb06g001620.2	Sb06g001620.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.30e-43	143.7	167	203
UBD/Beta-Prp	6.20e-65	220.1	251	459

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH ++v+++af ++   +++Gs D tik+WDl +g+l
   Q: 167  GHLGWVRSIAFdPGnEWFCTGSADRTIKIWDLASGTL 203
           8***********77799***************99976 PP

UBD/Beta-Prp

   S: 50   gheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvv 145
           gh ++v+++ ++p+ +il+tg++D + +vwd++t   v++l+gh+++v+s+   p++  +v+Gshd ti+ wdl  g  +  tl+ h+++v+ +++
   Q: 251  GHLSGVYCLALHPTIDILLTGGRDSVCRVWDIRTKAHVSALTGHDNTVCSVFARPTDPQVVTGSHDTTIKFWDLVAGRTMC-TLTHHKKSVRAMAL 345
           6899****************************************************************************9.************** PP
   S: 146  hpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght..........dnvksvrfs 231
           hp+++ ++s+s+D++ + ++l++g+ l+ + ++++  ++s++++++g  l++g+++g++ +wd ++g+    ++++t          + ++ ++ +
   Q: 346  HPKEKAFASASADNI-KKFSLPRGEFLHNMLSQQKTIINSMAVNEDG-VLATGGDNGSLWFWDWKSGHN--FQQDQTivqpgsleseACIYALAYD 437
           *************95.55************999************98.9****************9974..3334445556667766999999999 PP
   S: 232  pnderlvsgssDgsiriW..dl 251
             + rlv++ +D++i++W  dl
   Q: 438  ASGSRLVTCEADKTIKMWkeDL 459
           ******************5555 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATTAAADGP PVEPQSLKKL SLRSLKRSLD LFAPAHALLF TPDAESKRIR TGCKVRAEYG 60
AVKDLPPEQG RGGQGKGSAP TSSTALALPG TQDTKDGHRE GTSNAIVPVP LMLPKAPEST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAACGGAGG CTGTTTTCGC TCGCCGTGCG AAGCAATCCG CGGCGGCGGC GATGGCGACG 60
ACGGCGGCGG CGGACGGGCC CCCGGTAGAG CCGCAGTCCC TGAAGAAGCT GAGCCTCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000084	Aegilops tauschii	84.72	0.00e+00	844.00
IUUC-Aml-001605	Ailuropoda melanoleuca	49.41	2.00e-135	475.00
IUUC-Atr-002757	Amborella trichopoda	72.71	0.00e+00	690.00
IUUC-Apl-003198	Anas platyrhynchos	49.80	2.00e-137	481.00
IUUC-Aca-004683	Anolis carolinensis	49.02	4.00e-135	474.00
IUUC-Aly-005775	Arabidopsis lyrata	73.26	0.00e+00	694.00
IUUC-Ath-007460	Arabidopsis thaliana	72.54	0.00e+00	688.00
IUUC-Ago-007884	Ashbya gossypii	52.42	4.00e-102	363.00
IUUC-Acl-008153	Aspergillus clavatus	50.33	3.00e-122	430.00
IUUC-Afl-008384	Aspergillus flavus	51.19	2.00e-123	434.00
IUUC-Afu-009045	Aspergillus fumigatus	49.67	3.00e-121	427.00
IUUC-Ani-009229	Aspergillus nidulans	50.44	3.00e-120	424.00
IUUC-Ang-009812	Aspergillus niger	60.57	1.00e-110	391.00
IUUC-Aor-010059	Aspergillus oryzae	51.19	2.00e-123	434.00
IUUC-Ate-010351	Aspergillus terreus	48.66	1.00e-125	442.00
IUUC-Ame-011613	Astyanax mexicanus	40.42	9.00e-77	279.00
IUUC-Bgr-012042	Blumeria graminis	61.37	1.00e-123	435.00
IUUC-Bta-012406	Bos taurus	50.19	6.00e-137	479.00
IUUC-Bci-013760	Botrytis cinerea	47.48	3.00e-123	434.00
IUUC-Bdi-014776	Brachypodium distachyon	89.79	0.00e+00	870.00
IUUC-Bol-016189	Brassica oleracea	73.65	0.00e+00	715.00
IUUC-Bra-018044	Brassica rapa	73.86	0.00e+00	717.00
IUUC-Cel-018651	Caenorhabditis elegans	49.58	6.00e-130	456.00
IUUC-Cja-019974	Callithrix jacchus	49.80	1.00e-134	472.00
IUUC-Cfa-021085	Canis familiaris	49.22	3.00e-135	474.00
IUUC-Cpo-021458	Cavia porcellus	49.70	1.00e-134	472.00
IUUC-Cre-022880	Chlamydomonas reinhardtii	71.72	3.00e-156	543.00
IUUC-Csa-023883	Chlorocebus sabaeus	49.40	1.00e-134	472.00
IUUC-Cho-024623	Choloepus hoffmanni	49.80	2.00e-132	464.00
IUUC-Cin-025190	Ciona intestinalis	47.89	6.00e-130	456.00
IUUC-Csv-026367	Ciona savignyi	62.11	1.00e-126	446.00
IUUC-Cgl-026499	Colletotrichum gloeosporioides	50.68	1.00e-125	442.00
IUUC-Cne-027069	Cryptococcus neoformans	48.58	3.00e-115	407.00
IUUC-Cme-027233	Cyanidioschyzon merolae	30.79	7.00e-33	134.00
IUUC-Dre-028260	Danio rerio	50.59	7.00e-139	486.00
IUUC-Dno-029112	Dasypus novemcinctus	50.50	9.00e-136	476.00
IUUC-Dor-031118	Dipodomys ordii	57.69	4.00e-131	460.00
IUUC-Dse-031493	Dothistroma septosporum	48.36	8.00e-118	416.00
IUUC-Dme-032138	Drosophila melanogaster	51.26	2.00e-136	478.00
IUUC-Ete-032411	Echinops telfairi	45.42	8.00e-110	389.00
IUUC-Eca-033521	Equus caballus	49.22	2.00e-135	474.00
IUUC-Eeu-035249	Erinaceus europaeus	49.23	7.00e-102	363.00
IUUC-Fca-036358	Felis catus	49.80	1.00e-135	475.00
IUUC-Fal-036933	Ficedula albicollis	49.61	6.00e-137	479.00
IUUC-Fox-037713	Fusarium oxysporum	52.46	2.00e-126	444.00
IUUC-Fso-038380	Fusarium solani	61.70	5.00e-126	443.00
IUUC-Gmo-039133	Gadus morhua	50.20	1.00e-138	485.00
IUUC-Ggr-039915	Gaeumannomyces graminis	60.49	2.00e-118	418.00
IUUC-Gga-041176	Gallus gallus	50.00	1.00e-137	482.00
IUUC-Gac-042344	Gasterosteus aculeatus	50.89	3.00e-139	487.00
IUUC-Gma-043328	Glycine max	75.79	0.00e+00	723.00
IUUC-Ggo-044478	Gorilla gorilla	49.80	6.00e-135	473.00
IUUC-Hsa-046037	Homo sapiens	50.00	3.00e-135	474.00
IUUC-Hvu-047349	Hordeum vulgare	89.19	0.00e+00	860.00
IUUC-Itr-048390	Ictidomys tridecemlineatus	50.40	8.00e-136	476.00
IUUC-Kpa-049343	Komagataella pastoris	57.94	7.00e-116	409.00
IUUC-Lch-049830	Latimeria chalumnae	50.29	1.00e-137	482.00
IUUC-Lpe-051442	Leersia perrieri	90.81	0.00e+00	855.00
IUUC-Loc-051794	Lepisosteus oculatus	50.80	4.00e-134	470.00
IUUC-Lma-053137	Leptosphaeria maculans	45.27	3.00e-121	427.00
IUUC-Laf-053471	Loxodonta africana	50.00	4.00e-136	477.00
IUUC-Mcc-055627	Macaca mulatta	49.40	1.00e-134	472.00
IUUC-Meu-056148	Macropus eugenii	48.03	2.00e-129	454.00
IUUC-Mor-056960	Magnaporthe oryzae	60.37	3.00e-124	437.00
IUUC-Mtr-057816	Medicago truncatula	74.53	0.00e+00	715.00
IUUC-Mla-059031	Melampsora laricipopulina	51.78	2.00e-115	407.00
IUUC-Mga-059337	Meleagris gallopavo	49.80	8.00e-136	476.00
IUUC-Mvi-060217	Microbotryum violaceum	57.19	1.00e-116	412.00
IUUC-Mmr-061018	Microcebus murinus	49.22	3.00e-136	477.00
IUUC-Mdo-062863	Monodelphis domestica	49.02	2.00e-131	462.00
IUUC-Mmu-063988	Mus musculus	49.61	9.00e-134	469.00
IUUC-Mac-064459	Musa acuminata	79.42	0.00e+00	731.00
IUUC-Mpu-066559	Mustela putorius furo	49.80	1.00e-135	475.00
IUUC-Mlu-067361	Myotis lucifugus	49.80	5.00e-134	470.00
IUUC-Nfi-068492	Neosartorya fischeri	50.33	4.00e-121	427.00
IUUC-Ncr-068808	Neurospora crassa	59.88	5.00e-124	437.00
IUUC-Nle-069875	Nomascus leucogenys	49.80	5.00e-135	473.00
IUUC-Opr-070462	Ochotona princeps	61.80	2.00e-98	352.00
IUUC-Ont-071365	Oreochromis niloticus	51.57	1.00e-140	492.00
IUUC-Oan-072708	Ornithorhynchus anatinus	50.00	1.00e-136	478.00
IUUC-Ocu-074594	Oryctolagus cuniculus	49.41	5.00e-136	477.00
IUUC-Oba-075570	Oryza barthii	89.64	0.00e+00	847.00
IUUC-Obr-076366	Oryza brachyantha	97.52	3.00e-143	499.00
IUUC-Ogl-077153	Oryza glaberrima	89.43	0.00e+00	843.00
IUUC-Ogu-078540	Oryza glumaepatula	89.64	0.00e+00	846.00
IUUC-Oin-079612	Oryza indica	88.70	0.00e+00	840.00
IUUC-Olo-081077	Oryza longistaminata	88.70	0.00e+00	840.00
IUUC-Ome-081236	Oryza meridionalis	88.28	0.00e+00	836.00
IUUC-Oni-082499	Oryza nivara	89.64	0.00e+00	846.00
IUUC-Opu-083499	Oryza punctata	89.12	0.00e+00	842.00
IUUC-Oru-084276	Oryza rufipogon	89.64	0.00e+00	846.00
IUUC-Osa-085849	Oryza sativa	89.64	0.00e+00	846.00
IUUC-Ola-086655	Oryzias latipes	49.80	1.00e-137	482.00
IUUC-Olu-087637	Ostreococcus lucimarinus	67.13	2.00e-146	511.00
IUUC-Oga-087934	Otolemur garnettii	48.92	4.00e-136	477.00
IUUC-Oar-090185	Ovis aries	48.93	7.00e-136	476.00
IUUC-Ptr-091198	Pan troglodytes	49.80	5.00e-135	473.00
IUUC-Pan-092622	Papio anubis	49.40	1.00e-134	472.00
IUUC-Psi-093320	Pelodiscus sinensis	49.21	2.00e-133	468.00
IUUC-Pma-094638	Petromyzon marinus	50.39	7.00e-139	486.00
IUUC-Pno-094826	Phaeosphaeria nodorum	50.90	5.00e-98	350.00
IUUC-Ppa-095576	Physcomitrella patens	64.67	2.00e-172	598.00
IUUC-Pfo-096894	Poecilia formosa	50.59	1.00e-138	485.00
IUUC-Pab-098020	Pongo abelii	49.80	4.00e-135	473.00
IUUC-Pop-099180	Populus trichocarpa	75.26	0.00e+00	705.00
IUUC-Pca-100909	Procavia capensis	47.85	5.00e-107	380.00
IUUC-Ppe-101346	Prunus persica	75.26	0.00e+00	724.00
IUUC-Pva-102167	Pteropus vampyrus	51.54	1.00e-111	395.00
IUUC-Pgr-103516	Puccinia graminis	48.53	1.00e-114	405.00
IUUC-Ptt-103738	Puccinia triticina	48.10	9.00e-114	402.00
IUUC-Pte-104352	Pyrenophora teres	48.21	3.00e-125	441.00
IUUC-Pyt-104632	Pyrenophora triticirepentis	48.21	2.00e-125	441.00
IUUC-Rno-105291	Rattus norvegicus	50.10	8.00e-135	473.00
IUUC-Sce-106204	Saccharomyces cerevisiae	49.34	1.00e-106	379.00
IUUC-Sha-106943	Sarcophilus harrisii	48.34	1.00e-128	452.00
IUUC-Sja-107659	Schizosaccharomyces japonicus	61.96	1.00e-120	425.00
IUUC-Spo-108049	Schizosaccharomyces pombe	57.41	1.00e-122	432.00
IUUC-Smo-109043	Selaginella moellendorffii	79.18	1.00e-173	601.00
IUUC-Sit-110431	Setaria italica	93.50	0.00e+00	903.00
IUUC-Sly-111391	Solanum lycopersicum	72.42	0.00e+00	640.00
IUUC-Stu-112364	Solanum tuberosum	72.37	3.00e-131	459.00
IUUC-Sar-113450	Sorex araneus	63.36	7.00e-128	449.00
IUUC-Sre-115153	Sporisorium reilianum	54.85	4.00e-109	387.00
IUUC-Ssc-116274	Sus scrofa	49.80	7.00e-135	473.00
IUUC-Tgu-117417	Taeniopygia guttata	50.20	7.00e-139	486.00
IUUC-Tru-117615	Takifugu rubripes	50.80	6.00e-133	466.00
IUUC-Tsy-119480	Tarsius syrichta	50.30	3.00e-135	474.00
IUUC-Tni-119847	Tetraodon nigroviridis	51.30	2.00e-139	488.00
IUUC-Tca-121287	Theobroma cacao	75.16	0.00e+00	730.00
IUUC-Tre-122010	Trichoderma reesei	60.06	6.00e-123	433.00
IUUC-Tvi-122475	Trichoderma virens	60.06	5.00e-123	433.00
IUUC-Tae-124921	Triticum aestivum	90.47	0.00e+00	859.00
IUUC-Tur-126116	Triticum urartu	79.13	0.00e+00	689.00
IUUC-Tme-126992	Tuber melanosporum	49.06	1.00e-127	449.00
IUUC-Tbe-127803	Tupaia belangeri	57.01	5.00e-100	357.00
IUUC-Ttr-128933	Tursiops truncatus	49.41	3.00e-135	474.00
IUUC-Uma-129447	Ustilago maydis	54.83	6.00e-108	383.00
IUUC-Vda-129780	Verticillium dahliae	50.00	2.00e-123	435.00
IUUC-Vpa-130557	Vicugna pacos	45.36	7.00e-46	177.00
IUUC-Vvi-130918	Vitis vinifera	75.79	0.00e+00	693.00
IUUC-Xtr-132409	Xenopus tropicalis	48.11	9.00e-132	462.00
IUUC-Xma-133420	Xiphophorus maculatus	51.99	3.00e-142	497.00
IUUC-Yli-134362	Yarrowia lipolytica	47.23	3.00e-115	407.00
IUUC-Zma-135804	Zea mays	95.22	0.00e+00	900.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence