iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__1567__AT2G35420.1	fgenesh2_kg.4__1567__AT2G35420.1	fgenesh2_kg.4__1567__AT2G35420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-08	33.4	100	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plv.lpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f+d+  +++ + C H fh +C+  w         + +CP+Cr
   Q: 100  CAICLSEFSDEdtVRLiTVCRHPFHSNCIDLW------FELHKTCPVCR 142
           ********55444554388*************......999*******8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSSTTSIPTT DVFPTVSMPI TIVLIGVLLF VIFAGFFSLF FWRFLLNRLF SAWNLQQTPY 60
SDLIHVATPP EKPGLDPFII RSFPVFPYSS ATMKNHGTEC AICLSEFSDE DTVRLITVCR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCACAGAAG ACTCGCTCAA AATGCTAAGC AAAGCCACTT CTGTCTCTGT GACTCGGACA 60
GAGCCACGTC CTTCTCCTCA TTTCTCTCTA TTAACTTGAA CAATATTCCT TCTCTCGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_482507

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006837	Arabidopsis thaliana	87.40	2.00e-122	430.00
IUUC-Bol-016098	Brassica oleracea	68.55	8.00e-86	310.00
IUUC-Bra-017310	Brassica rapa	65.06	1.00e-96	345.00
IUUC-Ogl-077109	Oryza glaberrima	46.24	2.00e-21	94.70
IUUC-Ogu-078731	Oryza glumaepatula	46.24	2.00e-21	94.70
IUUC-Oin-079688	Oryza indica	46.24	4.00e-21	92.00
IUUC-Olo-080350	Oryza longistaminata	45.16	1.00e-19	88.60
IUUC-Oni-082969	Oryza nivara	46.24	2.00e-21	94.70
IUUC-Opu-083793	Oryza punctata	53.42	1.00e-18	85.50
IUUC-Oru-084314	Oryza rufipogon	46.24	2.00e-21	94.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence