iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017997

Ensembl Protein ID

Bra017049.1-P

UniProt Accession

M4DKL8; M4DKL8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra017049	Bra017049.1	Bra017049.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	80.66	0.00e+00	1524.00	IUUC-Ath-006911
E3 activity/RING/RING	43.57	0.00e+00	646.00	IUUC-Osa-086280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNTNGSSSAS AERSINLPQQ PDYASKLVQE ALMHLASSNL RDLCNEAKVE RCRATRDLTS 60
CGRSVRYALN PCGHASLCRE CCERFDLCPI CRSTLPRSGD KLRLRLYYEC VEAGLIPRVH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACACGA ACGGCTCTTC CTCCGCCTCC GCCGAGAGAT CGATTAATCT TCCGCAACAG 60
CCTGATTACG CTAGCAAACT TGTTCAGGTA CTCTCGATTT CTCCTTCTCT TCGCGAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR025151--ELYS_dom
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Pfam

PF13934--ELYS

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0009409--P:response to cold
GO:0010228--P:vegetative to reproductive phase transition of meristem

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000377	Aegilops tauschii	40.04	3.00e-110	392.00
IUUC-Atr-003128	Amborella trichopoda	52.49	0.00e+00	757.00
IUUC-Aly-005703	Arabidopsis lyrata	81.91	0.00e+00	1491.00
IUUC-Ath-006911	Arabidopsis thaliana	79.70	0.00e+00	1477.00
IUUC-Bdi-014716	Brachypodium distachyon	46.28	5.00e-173	601.00
IUUC-Bol-015719	Brassica oleracea	94.07	0.00e+00	1806.00
IUUC-Gma-044277	Glycine max	48.10	0.00e+00	739.00
IUUC-Hvu-047462	Hordeum vulgare	42.56	0.00e+00	630.00
IUUC-Lpe-051358	Leersia perrieri	42.44	2.00e-160	559.00
IUUC-Mtr-058237	Medicago truncatula	46.97	0.00e+00	792.00
IUUC-Mac-065210	Musa acuminata	44.86	0.00e+00	701.00
IUUC-Oba-075582	Oryza barthii	41.26	1.00e-167	583.00
IUUC-Obr-076132	Oryza brachyantha	48.68	0.00e+00	636.00
IUUC-Ogl-077653	Oryza glaberrima	43.03	0.00e+00	627.00
IUUC-Ogu-078815	Oryza glumaepatula	42.60	4.00e-180	624.00
IUUC-Oin-079544	Oryza indica	32.69	4.00e-96	345.00
IUUC-Olo-080263	Oryza longistaminata	34.88	1.00e-125	443.00
IUUC-Oni-082232	Oryza nivara	41.79	1.00e-174	606.00
IUUC-Opu-083296	Oryza punctata	47.06	3.00e-90	326.00
IUUC-Oru-084438	Oryza rufipogon	41.79	2.00e-174	606.00
IUUC-Osa-086280	Oryza sativa	79.70	0.00e+00	1477.00
IUUC-Olu-087642	Ostreococcus lucimarinus	23.73	9.00e-16	79.70
IUUC-Ppa-095437	Physcomitrella patens	39.27	5.00e-92	332.00
IUUC-Pop-099913	Populus trichocarpa	52.22	0.00e+00	864.00
IUUC-Ppe-102080	Prunus persica	50.31	0.00e+00	866.00
IUUC-Ssl-108458	Sclerotinia sclerotiorum	24.81	1.00e-02	34.70
IUUC-Smo-109433	Selaginella moellendorffii	45.09	3.00e-152	531.00
IUUC-Sit-110519	Setaria italica	47.45	1.00e-178	619.00
IUUC-Sly-111501	Solanum lycopersicum	48.30	0.00e+00	803.00
IUUC-Stu-112823	Solanum tuberosum	48.66	0.00e+00	814.00
IUUC-Sbi-113975	Sorghum bicolor	39.58	8.00e-36	144.00
IUUC-Tca-121088	Theobroma cacao	51.10	0.00e+00	891.00
IUUC-Tae-124809	Triticum aestivum	44.31	8.00e-179	620.00
IUUC-Tur-126265	Triticum urartu	40.87	8.00e-154	537.00
IUUC-Vvi-130863	Vitis vinifera	50.40	0.00e+00	822.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence