iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016752

Ensembl Protein ID

Bra015308.1-P

UniProt Accession

M4DFN5; M4DFN5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra015308	Bra015308.1	Bra015308.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-07	31.4	135	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++ p C Hvfh dC+  w       + +++CPlCr
   Q: 135  CSVCLNEFqeDEKLRIIPnCCHVFHIDCIDIW------LQSNANCPLCR 177
           ********87444999999*************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDLTDRRNPF NNLAYPPPPP PRPSTTFTSH IFPRGSSSGT TFPILAVAVI GILATALLLV 60
SYYIFVIKCC LNWHQIDIFR RRRRSSDQNP LMIYTPHELN RGLDESAIRA IPIFKFKKRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTAA CGGACCGTCG CAACCCTTTC AACAACCTGG CGTATCCGCC GCCGCCACCG 60
CCACGGCCCT CAACTACCTT CACAAGCCAT ATTTTCCCAC GAGGAAGCTC TTCCGGCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006087	Arabidopsis lyrata	73.95	9.00e-117	412.00
IUUC-Ath-006741	Arabidopsis thaliana	74.47	2.00e-133	468.00
IUUC-Bol-015259	Brassica oleracea	91.91	1.00e-170	592.00
IUUC-Mla-058831	Melampsora laricipopulina	40.58	4.00e-08	52.80
IUUC-Obr-076646	Oryza brachyantha	37.92	9.00e-40	156.00
IUUC-Oin-080156	Oryza indica	34.68	3.00e-36	145.00
IUUC-Olo-080454	Oryza longistaminata	35.31	8.00e-38	150.00
IUUC-Oni-082085	Oryza nivara	34.68	2.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence